Anoplopoma fimbria (sablefish): 129100655
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Entry
129100655 CDS
T09102
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129100655
04121 Ubiquitin system [BR:
afb04121
]
129100655
Transcription factors [BR:
afb03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
129100655
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
129100655
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GFIT
Motif
Pfam:
zf-BED
DUF659
hAT-like_RNase-H
OrsD
Motif
Other DBs
NCBI-GeneID:
129100655
NCBI-ProteinID:
XP_054466069
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Position
13:15087615..15093275
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AA seq
593 aa
AA seq
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MADEELYVPKACNKSKVWQNFGFAKKDGKLDKTHAICKICRAAIKYTGSTTNLGTHLKRR
HGETSASSSDSSMATVAASTSTPAQSISTFFHAPLATNSARSKAITEAIAFFICKDIQPY
SVVENEGFQYLLNILEPRYHIPNRKLFTDKEIPLLYEKVRHEIAKSLSNAKRVAITVDGW
TSRATDSYVTVTAHYIDEEWVLQNHVLQTRPFNEAHTGNNLGLLLKDVCCTWNIADKNPA
LVTDNAKNMLLAGVRAEINPHVRCIAHTLNLASQKSLKVDRVSELLVKVRKITTFFHRSP
QATEVLREMQAQLHMPNHKLIHDVPTRWNSSLDMLERFWEQQPAVLNTLLSRKIKRGEGL
ASLTEEDMTLIPEVIKLMSPLKVATTLLSEEKHPTISMISPIQAKLQKHFQPDESDLLEI
SVMKERFRQDFDGRYTYLQDLLYYAAVLDPRFKDLAFLEDHGTKDMVFTKLTAEVVMMEE
EASDSGTLNEGQAEVDRSPEEERDDVPPKKTALNQMFGDFLTARAPMKTTRERELSKLCK
VDPYLDTHPPPYSPPLTGPPAADEEEEEDKPQASTSASAPKAGPSSLSARGVL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgaggagttatacgtccctaaagcttgcaataagtccaaggtttggcaaaac
tttggctttgcaaagaaagatggaaaattggataagacccatgcaatatgcaaaatatgt
cgtgctgccataaagtacacaggcagcacgactaatttaggtactcacctgaagaggcga
catggtgagacgtctgcctcatcctccgattcatctatggctacagtggctgcctcaaca
agtacacctgcgcaaagtatttccaccttttttcatgccccgctggctaccaactcagct
cgatcaaaggcaataaccgaagccattgccttctttatttgcaaagatattcagccttac
agtgttgttgaaaacgagggcttccaatacctcctaaacattctggagccgaggtaccac
atcccgaataggaagcttttcacagataaagaaatccctcttctgtatgaaaaagtgagg
catgaaatagctaaatcgttgagcaatgccaaaagagttgctattacagttgatggttgg
acgtctcgcgccactgactcctatgtcaccgtaacggcacattacatcgatgaagagtgg
gttttacaaaaccacgtccttcaaaccagaccgttcaacgaggctcacacagggaataat
ctgggacttttactgaaggacgtttgttgcacatggaacatcgcagacaagaacccagcg
ttggtcacggacaacgcaaaaaatatgttactggctggagttcgtgcagagataaacccc
catgtgcgatgcatcgcgcacacgctcaatctggcctcacaaaaatccctgaaggtggac
agggtgtcagagcttctggtgaaagtgaggaagattacaactttttttcacagaagccca
caagcaactgaggttctacgtgaaatgcaggcccagttacacatgccaaatcacaagctc
atccatgatgttcccacaagatggaacagttcacttgacatgttggagcgtttttgggag
cagcagcctgctgtgttgaacactcttctgtcaaggaagataaagaggggagaaggatta
gccagcctgacagaggaagacatgacactgatcccagaggtcatcaaattgatgtcccct
ctgaaagtggcaacaacactcctcagtgaggaaaaacaccccactatctcaatgatctcc
ccaatacaggccaaacttcagaagcatttccagccagatgagagcgatctgctggaaatt
tctgtgatgaaggagcgattccgacaggattttgatggtcgctacacgtatctccaagac
ctcctctactatgctgcagtgctcgatccacggttcaaagacctggctttcttggaagac
cacggcaccaaggacatggtattcacgaagctaacagcagaggtggtgatgatggaggaa
gaggcaagtgacagtggcacactcaatgagggccaggcagaggttgacagaagcccagag
gaagagagagatgatgtcccccccaagaagacagccttgaaccagatgtttggggatttc
ctcactgcgagagcaccaatgaagaccacaagggagagggagctgtccaagctatgtaaa
gtggacccttatctagacacccatcctcccccgtacagccctccactgacaggaccacca
gctgcagacgaggaggaagaagaagacaaaccacaagcctcaacctcagcctcagcccct
aaagcaggaccctccagcttatccgcccgaggagtcctctaa
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