Anoplopoma fimbria (sablefish): 129100663
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Entry
129100663 CDS
T09102
Symbol
tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afb02000
]
129100663 (tmc1)
03037 Cilium and associated proteins [BR:
afb03037
]
129100663 (tmc1)
Transporters [BR:
afb02000
]
Other transporters
Pores ion channels [TC:
1
]
129100663 (tmc1)
Cilium and associated proteins [BR:
afb03037
]
Other cilia and associated proteins
Stereociliary proteins
129100663 (tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Piezo_TM1-24
Na_K-ATPase
COX16
Motif
Other DBs
NCBI-GeneID:
129100663
NCBI-ProteinID:
XP_054466077
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Position
13:16349814..16357983
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AA seq
916 aa
AA seq
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MPRDNLITSENDIDIGLEFEGDNDEVSTFQDEHERKRHRSKRSDGDQERRKRRNGRRKRA
SRAEEEEGESQARPEKRERGRRKRTRSDQDAEGKERDDEVQPKIKSCEEAKTRKHKQNKK
TRKIEPSEEDDNDTEDNEEKEVRPESLSPEELEMLKEAVDERKKLIQNLRGKPWPMKKKL
VTLRESQEFVEKYEGALGKGKGRKLYAYKVMMTKKWMKFQRDFENFKTACIPWEMKIKEI
ESHFGSSVASYFIFLRWMYGINMILFCLTFGLVMVPEALMGRPYGTIPRKTVPRPEATSA
MDFAVLWDFGGYAQYSVLFYGYYNNQRAIGWLKFRMPLSYFLVGVGTVAYSYMVVIRTMA
RNANESGVGDDNSFNFSWKTFTSWDYLIGNPETADNKFASITTSFKEAILEEQESQKDDN
IHLTRFLRVLANFLVLCCLAGSGYLIYFVVRRSQKFALDGLENHTWWERNEVNMVMSLLG
MFCPMLFDVISALENYHPRVALQWQLGRIFALFLGNLYTFIIALMDEINLKREEEKIIKF
NITMWEASLYNGTVAENTTAPPVTIQPADVPRGPCWETMVGQEFVRLIISDTMTTYITLL
IGDFLRAVLVRFLNYCWCWDLEAGFPSYSEFDVSGNVLGLIFNQGMIWMGAFYAPCLPAL
NVLRLHVSMYLQCWAVMCCNVPQERVFKASGSNNFYMAMLLVILFLSTLPAIYTIVTIPP
SFDCGPFSGKKRMFDVIQETLESDFPAWFGKVFSYASNPGLVLPFILLMILAIYYLQSTS
KSYKEANVDLKKKLQTQNEENKKKNKLAALKAQMDLEEARKSSTQTAEQQKNNNASLQDQ
EADEEEDHSSGQRRHHCTNGRNAPPSFRGQEGQLPATRAPVSRSYHHGNHGAPGYLPGLP
RQNDPRMHRVPSLQRH
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgagacaatttgatcacctctgagaatgacattgacattggactggaatttgaa
ggtgacaatgatgaagtttctacttttcaagatgaacatgagaggaaacgacacagatca
aaaagaagcgatggtgatcaagagagaaggaagaggagaaatgggaggagaaaaagagca
tctagagcagaggaagaggagggagagtcacaggccaggcctgagaaaagagaaaggggc
aggagaaagagaacaaggagtgatcaagatgcagaagggaaagagagggatgatgaggtg
cagcccaaaataaaaagctgtgaggaagcaaaaacaagaaagcacaaacaaaacaaaaaa
acaagaaaaatagagccaagtgaggaagatgacaatgatacagaggacaatgaggagaaa
gaggtgaggccagagtctctgtcaccggaggagctggagatgctgaaggaggccgtggac
gagaggaagaaactgatccaaaatctgagggggaaaccctggccaatgaaaaagaaactt
gtgactttgcgggaatctcaggagtttgtggagaaatacgagggagctttaggaaaaggg
aaaggcaggaagctctatgcatacaaggtcatgatgaccaagaaatggatgaagtttcaa
cgggactttgaaaatttcaaaactgcctgcattccatgggagatgaaaatcaaggagatt
gaaagtcattttggctcctcagttgcctcttactttatcttcttgaggtggatgtatggc
atcaacatgatcttgttttgtctgacctttggcctggttatggtgccagaggcattaatg
gggagaccatatggcaccatcccaagaaagactgtccccaggcctgaggcaaccagtgcc
atggacttcgctgtcttatgggactttggaggttacgctcagtattcagtcctcttctac
ggttactacaacaaccagcgagccattggctggctcaagttccgtatgcctctgtcatac
ttcctggttggtgtgggaacagtggcctatagctatatggtggtaataagaacgatggcc
cgtaatgcaaatgagtcaggggtcggagatgataacagctttaattttagctggaaaact
ttcaccagctgggactacttgataggaaaccctgaaactgcagacaataagtttgcctcc
atcaccaccagttttaaggaggcaatcttggaggagcaggagagccaaaaggatgacaac
atccatctgactcgttttctgcgtgtgctcgccaacttcctggtcctgtgctgcttagca
ggaagtggatacctcatctactttgtagtgcggcgctctcagaagtttgcccttgatgga
ctggagaatcacacctggtgggaaaggaatgaggtgaacatggtcatgtcattactgggg
atgttctgccccatgctgttcgatgtcatcagtgccctggagaactatcaccctcgtgtc
gccctgcagtggcagctgggtcgcatctttgccctcttcttgggaaatctctacaccttc
atcattgcactcatggatgagattaacctcaaaagggaagaggaaaagataattaagttt
aatataaccatgtgggaagccagtctttacaatggcacagtagcagaaaacaccacggct
ccacccgtcactatccagcctgctgatgtgcccagagggccctgctgggagaccatggtg
ggccaggagtttgttcggctgatcatatctgataccatgacaacctatatcacgctgctg
atcggtgacttcctgagagctgtgcttgttcgtttcctcaactactgctggtgttgggac
ctcgaggccggatttccgtcctactctgagtttgatgtcagtggaaacgtacttggccta
atcttcaatcaaggaatgatatggatgggtgctttctatgccccctgcctgcctgccctc
aacgtcctccggctccacgtgtccatgtacctgcagtgctgggcagtgatgtgctgcaat
gtgccgcaggaaagggttttcaaggcctctggctccaacaacttctacatggccatgttg
ctggtcatcctcttcctgtccactttgcctgccatctacaccatcgtcaccatcccccct
tcctttgactgtggacccttcagtgggaaaaaacgtatgtttgatgtgatccaggagacc
cttgagtccgacttccctgcctggtttggtaaagtgttcagctatgcctctaacccggga
ctggtgctgcccttcatactacttatgatactggccatttattacttgcaatcaacatcc
aaaagctacaaagaagctaatgtggacctgaagaaaaaactacaaacacaaaatgaggag
aacaagaaaaagaacaaactagcagcgctgaaggcacaaatggatttagaagaggccaga
aaatcttcaacacagactgcagagcagcaaaagaacaacaatgcttcactacaagaccaa
gaggcagatgaagaagaagaccacagtagtggtcagaggcgacatcactgtacaaatgga
cgcaacgctcctccttcatttagaggacaggaaggccaacttccagccactagagcccct
gtatccaggtcctatcaccatggtaaccacggggctcctgggtacctgcctggtctccct
cggcaaaatgaccccaggatgcacagggtgccgagtctgcagagacactga
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