Anoplopoma fimbria (sablefish): 129100692
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Entry
129100692 CDS
T09102
Symbol
lrp13
Name
(RefSeq) low-density lipoprotein receptor-related protein 2
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129100692 (lrp13)
Membrane trafficking [BR:
afb04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
129100692 (lrp13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
EGF_LRP2
SGL
DUF5050
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
129100692
NCBI-ProteinID:
XP_054466107
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All DBs
Position
13:complement(20528854..20538227)
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AA seq
1356 aa
AA seq
DB search
MGGCLLLCAVFLQLSGPLQVVSAESGSLKCGLGSKLCKDGSECVLYSHVCDGEPDCKDGS
DEEDCASGCDEDQFQCAHGKKCIDKVQVCDGVPQCQDRSDEMQCTKQTEGCVHHCDNNSR
CIPANFICDGERDCLDGTDEANCEDQEEDEHEKEEGAGSTPLPAASVDSSTPIKCPLGSK
PCMDNIECVLYNHLCDGEADCKDGSDEGECTSTCETDQFQCAHGKKCIEQTQVCDGVPQC
QDRSDELGCTEQMEGCTHQCDNKTRCIPNSFLCDGERDCMDGSDEAFCADKGCSAAEFKC
ISGQCVSATMLCDGHPDCWDRSDEESCTNAPVCTTKQRCPQSKECLVQEWICDGDQDCKD
GTDEKDCPVAPLKCGTFQWSCKSKTKCIPTAWRCDSLKDCDDGSDETECELVPCLPHQFQ
CGSQECLDPILVCNSITNCADGSDEGGSCQIDCAEADNSRCSQGCYTTPQGTRCRCAAGF
KLMEDGLTCADIDECEGRWPGVCSQLCINTLGSYQCDCHPGYIMEMGGHHCKITGEPFLL
TSVHTDLFLFGLRSGSLDVLSSSAKRAILSLDYDWSEQRVFWVSLDTDSIRWSSLDQKTT
GTLIKGVRADSIAVDWLGRNLYWIDGVNSQIVAIRLATGTVDHSIILDEDLDQPRSLALL
PQKGLMFWTEIGNAVKIERAGMDGSERRAVVNSSLGWPGGVAVDTISERVYWTDERLRAI
GSATLDGDDIRILQMKETTNPFSLAVFNDMLYWSDAKKRVVLAAHKISGKNHQVLLKRPR
QPFSVKVIHPLLQMGIENQCEKMNCSHMCVLAPGPKAVCKCPAGLLLAEDGLTCSSLVNS
AVLLMLSPSTVTQIYLQSRHTAADLQGWPEHLALQVPGVNEAVIMDYSVRDHTLFLTDDG
TTSLSSFKLKGSDLSSQGQLLKLLGNTITAMALDWVTRNVYWSSNKQPRLQVTSITSAHT
AVLIKEGIGRVESIALHPPSGRVCFTNLGLQGRGTVATVECANMDGDGRSVVWKDAVQPT
SLVFSNNGETIYWADTDSGTIGSVQLNGSGYKELKADDGLASVAVSDYALLWMTVSDKTR
LWYRDEQQQNKLWFEVGTEVISIKAFGKSSQTGSNQCTENNGNCQHLCLATPGGRTCRCA
HDQILVNATHCGPDQSCPDGSRQCLDQLSCQPVEKFCNGHVDCYDHSDENCVNLKQWSGV
KVLAPTKPRSSSPSPPPSPTPLLSTLNVKVLPKNLDAEQCSQKRCSGNGRCVETNGDTAC
VCSLIYSGDSCQDNLLKNMQSPIVYGAAGLCAGVVVIAVLAAVVKRKKSANTRRASPAAV
KGTSMTDLENKAETTPTEQTSPADSDKPEEAVSSVG
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atgggtggatgtttgcttctttgtgctgtctttttacaattgtcagggcccttgcaagtt
gtttcagctgagagcggttctttgaagtgtggcctgggctctaaactgtgcaaggatggc
tccgagtgtgtcctctacagccatgtgtgtgatggagagcctgactgcaaggatggttca
gatgaagaggactgcgcttcaggatgcgatgaagatcagttccagtgtgctcatgggaaa
aagtgcatagacaaggtccaggtgtgtgacggcgtacctcagtgccaggaccgttctgat
gaaatgcagtgcacgaagcagactgagggctgcgttcatcactgtgacaacaatagtcgc
tgcattcctgcaaacttcatctgtgatggagagagggactgtttggatggcacagacgaa
gccaactgcgaggaccaagaggaagatgagcatgaaaaggaggaaggggccggttcaacc
cctttgcctgctgcctctgttgactcctcaacccccatcaagtgtcctttgggctctaaa
ccctgcatggacaacatagagtgtgttctatacaaccatctctgtgacggagaagcagac
tgcaaagatggctcagatgagggagaatgcacatcaacgtgtgaaacagaccagttccag
tgcgcgcatggtaagaagtgcatagagcagacccaggtatgtgacggcgtgccccagtgc
caggaccgctcggatgaactgggatgtaccgagcagatggagggctgcactcaccagtgt
gataacaagacccgctgcattcccaacagcttcctctgtgacggggagagggactgtatg
gacggcagtgacgaagcattctgtgctgacaagggctgcagtgccgctgagttcaagtgt
atcagtggccagtgtgtgtcggccacaatgctttgcgatggtcacccagactgctgggac
cgctcagatgaggaaagctgcaccaacgcaccggtctgcacaaccaaacaacgctgcccc
cagagcaaagagtgtctggtgcaggagtggatctgtgatggagatcaggactgcaaagat
ggcacagacgagaaggattgtcctgtggctccactgaaatgtggtacgttccagtggtcg
tgtaaatcaaagaccaagtgtatccctacagcctggaggtgtgacagcctgaaggactgc
gacgatggcagtgacgagactgaatgtgagctggtgccatgcctccctcaccagttccag
tgtggcagccaggagtgcctggatccgatcctggtgtgtaacagcatcaccaactgcgca
gacggctcggacgaggggggcagctgccagattgactgtgcggaggcagataacagccgc
tgctcccagggctgctacaccacgccacagggaacgcgttgtcgctgtgcagcagggttc
aagctcatggaggacgggttgacctgtgctgatattgatgagtgtgaaggccggtggcca
ggcgtctgcagtcagctgtgcatcaacactctagggtcataccaatgtgactgtcaccca
ggctacataatggagatgggtggacaccactgcaagatcaccggtgaacccttcctgttg
acgtccgtccatacggacctcttcttgtttggcctgcgcagtggcagcctagatgtgttg
tcgtcctctgccaagagggccatcctctccctggactacgactggagcgagcagagggtg
ttttgggtcagtctggacactgacagcatcaggtggtcctcgctggaccagaagaccaca
ggaactctgattaagggtgtccgagctgattctattgctgtcgactggctcgggaggaac
ctgtactggatcgacggagtgaacagtcagattgttgccatcagactggccacaggcact
gtggaccatagtatcatcctagatgaagacctggatcagcctcgctctctggcactgctc
ccacaaaaagggttgatgttctggactgagatcggaaatgcagtgaagatagagcgtgcc
gggatggacgggtcggagaggagggcagtggtgaactccagtctgggctggccgggcggt
gtggctgtggacaccatctctgagcgagtctactggacggatgaaaggctgagggcaata
ggatctgcaacgctggatggagatgacattcggattctacagatgaaagagaccaccaac
ccattctcactggcagtgttcaatgacatgctctactggtctgatgccaagaagcgagtg
gtgctggctgcccataaaatatctggcaaaaaccaccaagttctcctgaaaagacccaga
caaccttttagtgtgaaggtcatccacccattgctccagatgggcattgagaaccagtgt
gagaagatgaactgttcccacatgtgtgtgttggccccgggacccaaggctgtgtgcaag
tgccccgctggactcttactggctgaggatggtcttacctgctccagcctggttaattca
gcggtcctgctgatgctgtctccctctactgtcacccagatctacctgcagtcccgacac
acggctgcagacctgcagggctggcctgaacacctggccctgcaggtgcccggcgtcaat
gaggcagtcatcatggactacagcgtacgtgaccacaccctgttcttgacggacgacggc
acaacttcactcagctccttcaaactgaagggctccgacttgtcctcccagggccagctt
ctaaaactcctggggaacaccatcaccgccatggccctggactgggtaacgcgtaacgtc
tactggagcagcaacaaacagccccgcctgcaggtgacctccatcaccagtgcacacact
gctgtcctcataaaggaaggtattggcagagtggagtccatcgccctccaccctcccagt
ggaagagtttgtttcaccaacctgggcctgcagggaagaggcacagtggctactgtagag
tgcgccaacatggacggagacgggcggagtgtggtgtggaaggatgccgtccaacccact
tctctggtcttctccaataatggggagactatatactgggctgacacggattcagggacc
atcggctctgtccagcttaatggatctggatacaaagagttgaaggctgatgatggcctg
gcttctgtggctgtgagtgattatgcgctgctctggatgactgtcagtgacaagaccagg
ctgtggtacagagatgagcagcagcaaaacaagttgtggtttgaggtcggcacagaagtg
atcagcataaaggcgttcggcaagtccagtcagactggttcaaaccagtgcacggaaaac
aacggcaactgccagcacttatgcctcgccaccccaggaggtcggacatgcaggtgtgcc
catgaccaaatccttgtgaatgccacccactgtggcccggatcagagctgcccagatggc
agccggcagtgtctggatcaactctcatgccagcctgttgagaagttctgtaacggtcac
gtggactgctatgatcactcggatgagaactgtgtcaatctgaagcagtggtcaggagtc
aaggttctcgctcccaccaagccccggagctcctctccttctccgccgccctctccaact
cctctcctctccaccctgaatgtgaaagttctgcccaagaacctggacgccgagcagtgc
agccagaaacgctgcagcggcaacggacgctgtgtcgaaaccaacggagacactgcgtgt
gtgtgttcactgatctacagcggtgactcctgtcaagacaatctcctgaagaacatgcag
agtccgatcgtctacggcgccgcggggctctgtgcgggagtggtggtcattgctgtgctg
gcagctgtggttaaacggaaaaagagcgccaacacacggagagctagcccagcagctgtg
aagggaaccagtatgactgacctggagaacaaagctgagaccaccccaactgaacaaact
tccccagcagactccgacaaacccgaggaagcggtatcttctgtgggctga
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