Anoplopoma fimbria (sablefish): 129100721
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Entry
129100721 CDS
T09102
Symbol
gldc
Name
(RefSeq) glycine dehydrogenase (decarboxylating), mitochondrial
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb00260
Glycine, serine and threonine metabolism
afb00630
Glyoxylate and dicarboxylate metabolism
afb00670
One carbon pool by folate
afb00785
Lipoic acid metabolism
afb01100
Metabolic pathways
afb01200
Carbon metabolism
Module
afb_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
129100721 (gldc)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
129100721 (gldc)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
129100721 (gldc)
00670 One carbon pool by folate
129100721 (gldc)
Enzymes [BR:
afb01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
129100721 (gldc)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
129100721
NCBI-ProteinID:
XP_054466139
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Position
13:complement(22027493..22042647)
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AA seq
899 aa
AA seq
DB search
MQSCAKSWGIFLAKSVNPSAPCRHLSDKSRVVWKLQCRIRTSGASSTTAARGLRTSAAVS
SRQIERILPRHDDFAERHIGPGEREKREMLDALGVESLEQLIDNTVPSSIRMQRSMKMDD
PICESDVLDTLQKIASKNKVWRSYIGMGYYNCMVPPPIQRNLLENSGWVTQYTPYQPEVS
QGRLESLLNYQTMICDITGMPMANASLLDEGTAAAEAMQLCHRQNKRRTFYIDPRCHPQT
IAVVQTRANYIGVKTVLKLPHEMDFSGKDVSGVLFQYPDTDGRVEDFTALVDRAHQGGAL
ACCATDLLALCVLRPPGEFGVDIALGSSQRFGVPLCYGGPHAAFFAVKDSLIRMMPGRMV
GVTRDAAGKEVYRLALQTREQHIRRDKATSNICTAQALLANMAAMFALYHGPQGLKHIAE
RTHNAALILAEGLKRAGHRLHSEMFFDTLKINCSVAAKDILERAVQREINLRVYTEGVLG
VSLDEMVTERDLDDLLWVFGCESSAELIAEKMGERVKGIMGSPFKRTSKYLTHQVFNSYH
SETNIVRYMKRLENKDISLVHSMIPLGSCTMKLNSSSELMPITWREFANIHPFVPLDQAD
GYQMLFKQLEKDLCEVTGYDRISFQPNSGAQGEYAGLAAIKAYLNSKGENARTVCLIPKS
AHGTNPASAQMAGMKVQVVEVDKDGNIDMAHLKALVDKHKASLAAMMVTYPSTFGVFEEQ
IGDVCELIHKNGGQVYLDGANMNAQVGLCRPGDYGSDVSHLNLHKTFCIPHGGGGPGMGP
IGVKAHLAPFLPSHPVVPMHAVNMGSSLGTISAAPWGSSAILTISWAYIKMMGSKGLLHA
TEVAILNANYMAKRLESHFKILFRGRKGFVAHEFILDVRPFKKTANIEAVDVAKRLQED
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgcagagctgcgccaagtcctgggggattttcttggccaagtcggtgaatcccagcgca
ccatgcaggcatctgagtgacaagagccgcgtggtttggaaacttcagtgcaggatccga
accagcggtgcatcctccacaacagcagcccgaggtctgaggacgtccgcagccgtctcc
tccaggcagatcgagaggatattacccagacacgatgattttgcagagaggcacattggt
ccaggtgagagggagaagagagaaatgctggatgctctgggagtcgagtctctcgaacag
ttgatcgacaacacagtcccgtcctccatccgaatgcagaggagtatgaaaatggatgac
ccaatctgtgagagtgatgttctggacactctacagaagattgcatcaaaaaacaaagta
tggaggtcctacatcggaatgggctactacaactgcatggtaccaccgcccatccaacgt
aatctcctggagaattcaggctgggtgactcagtacacaccctaccagcccgaggtctct
caaggtcggctggagtcgcttctcaactaccagaccatgatctgtgacatcactggcatg
cctatggccaacgcctccctgctcgacgagggaacggctgctgctgaggccatgcagctc
tgccacagacagaacaaaagaagaaccttctacattgacccacgctgccatccccagacc
attgctgtggtgcagaccagagccaactatatcggggtgaagacggtgctgaagcttcct
catgagatggacttcagcgggaaagacgtgagcggtgtgctcttccagtacccagacact
gatggcagggtggaagatttcacagctcttgtggaccgggcgcaccagggaggggctctg
gcttgctgtgccacagatctgttggccctctgtgttctgcgtcctcctggggagtttggc
gttgatatcgcactgggcagctcccagaggtttggggttcctctctgctacggtgggccc
cacgctgccttcttcgctgtcaaagacagcctgatccggatgatgcctggaagaatggtt
ggagtcaccagggatgcagctggtaaggaggtttatcggcttgctttgcagaccagagag
cagcacattcgcagagacaaagcaaccagcaacatctgcactgcacaggctctgctggcc
aacatggctgctatgtttgcgctgtatcatggtcctcagggactgaaacacattgctgag
aggacacacaatgctgctctgatccttgccgaaggtctgaagagagcgggacaccggctg
cacagtgagatgttctttgatactctgaagatcaactgtagcgtggcagccaaagacatc
cttgaaagagccgtgcagagggagattaacctgagggtttacactgagggagtgttgggt
gtctctctggatgagatggtgactgagagggacttggatgacttgctctgggtctttggt
tgtgaatcttcagcagagctgatcgctgagaagatgggtgagcgagtgaaggggatcatg
ggaagtcctttcaagaggacgagcaagtacctgacgcaccaggtctttaacagttatcac
tctgagaccaacattgtgcggtacatgaagcgcctggagaacaaggacatttccctggtg
cacagcatgatacctctgggctcctgcaccatgaagctaaacagctcttcagagctcatg
ccaatcacctggagggagtttgcaaacatccacccctttgtgcctctggatcaggctgat
ggctaccagatgctcttcaaacagctggagaaggacctctgtgaagtgacgggctatgat
cgtatctccttccagccaaatagtggtgctcagggagaatacgctggcctggcggccata
aaagcctacctgaactcaaagggagagaatgcaagaactgtctgtctgatccccaagtca
gcccacggcaccaacccagcgagcgctcagatggctggcatgaaggttcaggtggtggag
gtggacaaggacggcaacatcgacatggcacacctcaaggcgctggtggataaacacaag
gcgagtctggcagccatgatggtcacctacccttccacctttggtgtgtttgaggagcag
atcggagacgtatgtgagcttattcacaagaacggaggccaggtgtacctggatggggcc
aacatgaacgcccaggttggtctgtgtcgtcctggagattacggctctgacgtgtctcat
ctcaacctgcacaaaaccttctgtattcctcatggtggaggaggacctggcatggggcca
attggagtgaaggcacacctcgcccccttcctgccgagccaccctgtagttcccatgcat
gcagtcaacatgggcagctcgctgggcaccatcagcgccgccccctggggctccagcgcc
atcctgacaatctcctgggcttacatcaagatgatgggatccaaaggacttcttcacgct
acagaagtggccatcctcaatgccaactacatggccaagaggctggaaagtcactttaag
atcctcttcagaggcaggaaaggttttgtagcccacgagttcattctggatgtgaggcca
ttcaagaagacggccaatattgaggctgtcgacgtggccaagaggctgcaagaagattaa
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