Anoplopoma fimbria (sablefish): 129100778
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Entry
129100778 CDS
T09102
Symbol
clip1a
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
129100778 (clip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129100778 (clip1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
afb04812
]
129100778 (clip1a)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
129100778 (clip1a)
Cytoskeleton proteins [BR:
afb04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
129100778 (clip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
CCDC39
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
129100778
NCBI-ProteinID:
XP_054466232
LinkDB
All DBs
Position
13:4851762..4877769
Genome browser
AA seq
2236 aa
AA seq
DB search
MSTAKPSGIKGPSKIARPPGTAAPKTNPSTAGAKVNAADKSAASGGDAEGAGESFEIGER
VWVNGNKPGYIHFLGDAQFAPGQWAGIVLDEAIGKNDGSVAGVRYFQCDALRGIFTRPSK
LSRTEGEANGTQTAPPSRAASPTPSVGSVASHTPATKSTLPSTTTPTNKASSAASATPAT
PSSNLARTNSESVSNLSETGSVKKGERELKMGDRVLVGGTKAGVVRFLGETDFAKGEWCG
VELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTRIGFPSTTPAKAKTTVRKVVATPS
GLKRSPSASSISTMSSVASSVSAKPSRTGLLTETSSRYNRKISGTTALQEALKEKQQHIE
QLMAERDMERAEVAKATGHVGEMEQEIGLLREDQEQVSSPSGSMESKMDQLRALVGAADK
DKVELLNQLEEERRKVEDLQFRVEEACITKGDLETQTRLEHVHIKELEQSLLFEKTKAEK
LQRELEDTRVATVSERSRIMDLEKDLSLRAREVTDLQLRLGTQQGSEDSSLSPLLEEINS
LRDQLASQEVKQQEELTKYKEKLEAQEKTHSEAAAQLQASSVKLSGDNEQLQMRISQAEK
ENAELIEQWRSKYEAAIASHQQAIEELKVSFSKGAGAQTTELIETKSALESLKMEHKLAL
EEAGAKHEADAAALTREMQALKAQQFSLIEDKERLEDSLRSSVEKVEEQHLVEMEDVLGK
LHNAELQVKELEEKESMLAQQAQDKDRETKEQISEMVALRSQVAQANQELVTLKSQLEVV
QSQGNNQGAKVGELSSLLEGRQQEVLSLQQSLTSVQQEKDALEQELGVLKQNLAESTEEQ
TTSSNTMQETLEKLRKKEEQCTSLTTESESLRSQLAGLERKVKAADEKLGQLSKDKCKLE
NDISDMMKTSGDSSVQLTKMNEDLIQKERRLEELQSHLSEEKEKVAHLNEQLQQEQSRKE
QELIETRDTHQSQISGLQEKIANLEKTVEQGETLVEEFKASQEKSITQVSELHVKELEVL
QSQVDKLKQELSSNKDKNLELEKLVSELQPYKEQAQCLSAELDSYKHDVQHLTKKLEKHS
LDLENTCKEREDVKVEKGKLEKQLSDVQTKLSALEITHQELSVQKEELLITRDKLSKNLE
HLLANNKCSDEEKITLNKELEKLKDLLQDVQTENKNLKHAEGEHQAQIEELQRQNAEKTD
YLLKYQQDIQQIETKKKQLHEDYENVCKEKTRIEDDFNESRSKFTSEKENLILERDSARN
AKKSIDAKNTELQAKLKSLNLEKEDLTMRNTQLQALTETLTKEKVEMSSEISAALLDKKS
LETVKEELQNKLSIAKKDLENSVRECEELKASKMSLAQMLEEFKTSSQVTDSDRLHLLQE
KEDLLAIQRKVCNEKEELLREIQELKEKFQVSTEQLSKSNEKFKEALSSFEQEKQALRLQ
NSEIEMALHVIRKEKMSLDSALEQQKMDYERLAGEMGELEEKHTKTTSENNALSLERDKL
ASDIRTNKDQLDSYSRANDIFIQEKSLITTKLEETKRQKDEVEAEMTSLKREKADLQKEQ
QKHTIDVEVLEKGNAELVQEHSKLKRDFEKANSELVQQVDNLTKDCQRLQSLQTAADNNV
QSLQKENQSLLQEIQELKCQTESMSGAKHLLETQLQAESSDRNKVLSDKDGLSKQIEELQ
RTLSKVTQENKDISSNLKNADEQKKAFMMDMDDLKTQLKQREQETSQLTEDKGQLLSKIE
EINKQITFLTTEKEDLIAEHGKLEQNISSLHTSQEKSLVERSKLLGEIENLHATQKELEV
NLKGLKSEKELLEMQCKNAVAEVSASAVVKEEISSSISNLTAEKGALQVERDEATQKVRQ
LESQLKNAISKQLEATEASGKTAETLEQLTKENASLMQEKNKAQSSLEELLSSKQKMEAQ
LKTLKKNISKYQEDMNVCKEQLCIETQRTESQSHDIEELKAAVSVKTQSLQMLQDENNKL
TLDIENNHKALSDLVKLKDEHSKLKKQLKQSDSTLKEQFDKEKAVLQKSIHQSSALISEK
EQQVENLRSELVGLRGESDSVKTLQGKIQALERDKANLQDRVQSLEKDLAAGPDTINKSS
GDAVLDQLREDKETSESQIEFLNSVIVELQRKNEDLKDKLETMAAAALNGNNPSELDNYD
SHDKVPTKKKLPPRLFCDICDCFDLHDTEDCPTQMQMPDSPQHTTYHGSKGEERSYCDIC
EVFGHRTESCNDDQTF
NT seq
6711 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagccaagcccagtgggatcaaagggcccagcaagatagcaaggccacctggg
acagcagcccccaagaccaaccccagcacagcgggagctaaagtaaatgcggccgacaaa
tcagctgccagtggaggagatgccgagggtgctggggagagcttcgagataggggagcgt
gtatgggtaaatgggaataaaccaggctacatacactttttgggagatgcacagtttgcc
ccaggacagtgggcagggattgttctagatgaggcgattgggaagaacgatgggtcagtt
gcaggggtgcgctacttccagtgtgatgccctgcgaggaatattcacccgcccatccaag
ttgtctcgcacagaaggggaggctaatggaactcagacggcacccccctcacgtgctgca
tcacccactccttcagttggcagcgtagcctcgcatacacctgccacaaaatcaacatta
ccctcaactaccacgccaaccaataaggcctcctccgctgcatcagctacgccagctaca
ccatcctccaacctcgcacgcacaaacagtgaatctgtctctaacctctccgaaactgga
tcagtcaagaagggggaacgggaactgaagatgggcgaccgagtattggttggtggtaca
aaggcaggagtggtacgtttccttggagaaactgattttgctaaaggcgagtggtgtggt
gtggaattggatgagcccttaggaaagaatgacggggcagtggcaggcacaagatatttt
cagtgccaacccaagtatggcttatttgctccagtgcacaaagtcacccgcattggcttc
ccttccaccacgccagccaaagcaaaaacaacggttcgtaaggtagtggctacaccatca
gggctaaagcgaagccctagtgcctcttccatcagcaccatgagctctgtggcatcatct
gtcagcgccaagccaagccgtacaggcctgctaacagagacatcatcccggtataatcgc
aagatttcaggcaccacagccctgcaggaggcgctgaaggagaagcaacagcatattgag
cagcttatggctgagagggacatggagagagctgaagttgccaaggctactggccatgtt
ggagagatggagcaagagattggcctgctcagagaggatcaggagcaggtcagctcccca
agtggttcaatggagagcaagatggatcagttacgtgccttggtaggagctgcagacaaa
gacaaagtcgagctgctgaatcagctggaggaggagcgtaggaaggtggaggaccttcag
ttccgcgtagaggaagcttgcattaccaaaggagacctggagacgcagaccagactggag
catgtccacattaaggagcttgaacagagcctactctttgaaaagaccaaagctgagaaa
ctccaaagagagttagaagacactagggttgctactgtgtcggaaagatcccgcattatg
gaccttgagaaggatctttctctgcgtgcaagagaggttactgacctgcagctgcgtctt
gggacccaacaaggctctgaggactcttctctttctccccttctggaagagataaactct
ctgagggatcagttagcgtcccaagaagttaagcagcaagaagagctaacaaagtacaag
gagaagctagaagctcaagaaaagacccacagtgaggcagctgcacagctccaggcttca
tctgtaaagctctctggtgacaacgaacagttgcagatgcgtataagccaggctgagaag
gagaatgctgaacttattgaacagtggcgttccaagtacgaagctgccattgcctctcac
caacaagccattgaggagctgaaggtgtccttcagcaaaggcgcaggtgcccagacaaca
gaacttattgaaaccaaaagtgcactagagagtctgaaaatggagcacaagttggctcta
gaggaggctggagccaaacatgaggctgatgctgcagctttgactcgggagatgcaggca
ctgaaggcacagcagttttctttgattgaggacaaggagcgactggaggattcgctacgg
tccagcgttgaaaaagtagaggagcagcaccttgtggagatggaggatgttcttggaaaa
ctccataatgctgaacttcaggtgaaggagcttgaggagaaagaatcaatgttggcacaa
caggcccaagacaaggaccgagaaaccaaagagcagatttcagaaatggttgctctgcgc
agccaagtagcacaagctaaccaggagcttgtgaccctgaagagtcaattagaggtggtt
cagagtcaagggaacaaccagggtgccaaggtcggtgaattgagctcactgttggaaggc
cgacagcaggaagtcctctcattacagcagagtctgacctctgtacagcaggagaaggat
gccctggaacaggagcttggagttctgaaacaaaatttagctgaaagcacagaggagcag
actacatcatcaaacactatgcaagaaacacttgagaagcttcgtaagaaggaagagcag
tgcacatcgctgaccacagaatcagagtctctaagaagtcaacttgctgggctcgagagg
aaagtgaaggctgctgatgaaaagcttgggcagctctcaaaggacaaatgcaagctagaa
aatgatatttcggacatgatgaagacatctggtgatagttcagtacagctgaccaaaatg
aatgaagatctcatacagaaagaaaggaggcttgaggagttacagagtcacctatcagag
gagaaggagaaggtggcgcacttgaatgaacaactccagcaggaacaatcccgcaaagag
caagagctgatagagaccagggatacacatcagtctcaaataagtggcctccaggagaag
attgccaacttggagaagaccgttgaacagggtgagaccctggttgaggagttcaaggcc
tcacaagagaaatccatcactcaggtttcagagcttcatgtgaaggaacttgaggttctg
cagagtcaggttgacaagttgaagcaggagctctcctccaacaaggacaaaaacctggag
cttgagaagttggtgtctgagctgcagccatacaaggaacaggctcagtgtctttctgct
gagcttgactcctacaagcatgatgttcaacatttgaccaaaaaactggaaaagcacagt
ctagatctggaaaatacgtgtaaggaaagagaagatgttaaggttgagaaaggcaaattg
gagaaacagctttcagatgtgcagactaagctatctgcccttgagattacacaccaggag
ctttcagtccagaaagaagaactgctaataactagagataagctttccaaaaatctagag
catctacttgccaacaacaagtgctcggatgaagaaaagattacattgaacaaagagttg
gagaagctcaaagatcttcttcaggatgttcagactgaaaacaagaacctgaagcatgct
gaaggtgaacaccaggcccagattgaggagcttcaaagacaaaatgcagagaagactgac
tatctcctaaagtatcagcaggacattcagcaaattgagactaaaaagaagcaactacat
gaggattatgaaaatgtctgcaaagagaagacccggattgaagatgacttcaatgaaagc
aggtcaaagttcacaagtgagaaggaaaatctaattttagagagagattctgctagaaat
gccaaaaaatccattgatgctaagaatactgagttgcaggcaaaacttaaatccttaaac
ttagaaaaagaagatcttacaatgaggaacacccagctgcaggccctcacagaaacactg
acaaaagaaaaggtggagatgtcttctgaaatcagtgctgctttgttggataaaaagagc
cttgagacagtgaaggaggagctccagaataagctcagtattgccaagaaagatctggag
aactctgtccgtgaatgtgaagaacttaaagcctccaaaatgagccttgcccagatgctt
gaagagttcaagacaagcagtcaggtgactgattctgataggcttcaccttctacaggag
aaagaagacttacttgcaattcaaagaaaagtctgtaatgagaaggaagagctcctcaga
gagatacaagaattaaaggagaagtttcaagtctcaacagaacaattgtcaaagtccaac
gagaagtttaaagaagcattatcatcttttgagcaagagaagcaagcattacgccttcag
aattcagaaattgagatggctttacatgttatacgcaaagaaaagatgagcctggattca
gcactagagcagcagaaaatggattatgagcgtttggcaggggagatgggagaattagaa
gaaaagcacaccaaaacgacttctgagaataatgctctttctcttgagcgtgataagcta
gcaagtgatattagaacaaataaggaccagttggatagttactcaagagctaatgacatc
tttattcaagagaaatctcttataacaacaaagcttgaggaaaccaaacgccaaaaagac
gaagttgaagcagagatgacctctttgaaacgagagaaggctgacctacaaaaggagcag
cagaaacacaccattgatgttgaagttcttgaaaagggcaacgctgaacttgtgcaagag
cacagtaaactaaaaagggattttgagaaggctaattcagaacttgttcaacaggttgat
aacctgacaaaagattgtcagcgtttgcaatcgttgcagactgcggctgacaacaatgta
cagtccctgcagaaagagaaccaaagtctgcttcaggagatccaggagttaaaatgtcag
acggaatcaatgtcaggggccaagcaccttcttgaaacccagttacaggccgagtccagt
gatcgaaataaagttttatctgacaaggatggtctatccaaacaaattgaggagctgcag
agaacgttgtccaaagttacacaagaaaataaagatatttcttctaaccttaagaatgct
gatgagcaaaagaaggcttttatgatggatatggacgatttaaagactcaattgaagcag
cgagagcaagaaactagtcagttgacagaagataaagggcagctattatctaagatagag
gaaataaacaaacaaattaccttcctgaccacagagaaggaagaccttatagctgaacat
ggtaaattggagcagaacatttcttctctccacacaagccaagaaaagtcgctcgtagaa
cgctcaaaactccttggagagatagaaaacttgcacgctacccagaaagaactagaggtc
aatctcaagggcctaaaatctgaaaaagaacttttggaaatgcaatgcaagaatgctgtc
gcagaggtttcggcttctgccgttgtgaaagaggagatttcttcgagcatctcaaatctc
acagctgagaagggtgccctgcaggtggagagagatgaagccacccagaaagtcaggcag
ctggagtcccaactaaaaaatgccatttctaagcagcttgaggctacagaggcctctggc
aagactgctgagaccctggaacagctgacaaaggagaacgctagtttgatgcaggagaag
aacaaagcccaatcttcattggaagaactgctgagctccaagcagaagatggaggcacag
ctgaaaacactgaagaagaatatttccaaatatcaagaagatatgaatgtatgcaaagag
cagctttgcatagagactcagaggactgagagtcagtcccatgacattgaggagcttaaa
gcagcagtttctgtaaagacgcagtccctgcagatgctgcaagacgagaacaacaagctg
acgctggatattgaaaacaatcacaaagccctgagtgatctcgtgaagctcaaggatgag
cactcaaaactcaaaaaacagttgaagcaaagtgacagtaccttgaaggagcagtttgac
aaggagaaggcagtcctccaaaagtccatccatcaaagcagtgccttaatatcagaaaaa
gaacaacaggtggaaaacctgaggagtgagctggttggactgcgtggggaaagtgactcc
gttaagacactgcaaggtaaaattcaggccttggagcgggacaaggctaatctacaggac
cgtgttcagagtctggagaaggacctggctgcagggcctgacaccatcaacaagtcctca
ggtgatgcagttttggaccaactaagggaggataaggagacttctgagagtcagattgag
ttcttaaattcagtcatcgttgagctccagaggaaaaatgaggatcttaaggacaaattg
gagacaatggcagctgctgctctgaatgggaataatccaagtgagctggataactatgat
agccatgacaaggtacccacgaagaagaagcttcccccaaggctgttctgtgacatatgc
gactgcttcgaccttcatgacaccgaggactgtcccacccaaatgcagatgcccgactct
cctcagcacaccacctaccacggcagtaagggcgaagaacggtcctactgcgacatctgt
gaggtctttggccacaggaccgaatcctgtaatgatgaccagaccttttaa
DBGET
integrated database retrieval system
