KEGG   Anoplopoma fimbria (sablefish): 129100797
Entry
129100797         CDS       T09102                                 
Symbol
ciao1
Name
(RefSeq) probable cytosolic iron-sulfur protein assembly protein ciao1
  KO
K24730  cytosolic iron-sulfur protein assembly protein CIAO1
Organism
afb  Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:afb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:afb03036]
    129100797 (ciao1)
   03400 DNA repair and recombination proteins [BR:afb03400]
    129100797 (ciao1)
Chromosome and associated proteins [BR:afb03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    129100797 (ciao1)
DNA repair and recombination proteins [BR:afb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     129100797 (ciao1)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_IFT140_1st WDR55 Beta-prop_Aladin EIF3I WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_IFT122_1st WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_EIPR1 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_WDR41 NBCH_WD40 WDR90_beta-prop_4th eIF2A Beta-prop_TEP1_C Beta-prop_HPS5 Tricorn_2nd Beta-prop_DCAF12 B-prop_COPA_B_2nd Beta-prop_NUP159_NUP214 Beta-prop_ELP1_1st WDR54 RMC1_N Lactonase
Other DBs
NCBI-GeneID: 129100797
NCBI-ProteinID: XP_054466263
LinkDB
Position
13:16314804..16317766
AA seq 331 aa
MKEDLALVQTLNAHPDSRCWFVSWSPTGTLLASCGGDKAIRIWGLEGDSWVCKSVLQDGH
QRTVRRVAWSPCGNYLASASFDATTCIWKKKNNEFESLTVLEGHENEVKSVAWAPSGNLL
ATCSRDKSVWVWEVDEEDEYECVTVVNSHTQDVKHIVWHPTQELLASASYDNNVCIYKEE
DDDWECRATLQGHTSTVWSLDFDATGQRLASCSDDRTVKIWKESPNESGQGDLSWKCVCT
LSGYHGRTVYDVAWCRLTGALATACGDDAVRVFKEDESADPDQPVFSLAAQVTKAHSQDV
NCVAWNPKEAGLLASCSDDGEISIWRFKPED
NT seq 996 nt   +upstreamnt  +downstreamnt
atgaaggaggacttggccctggttcagacgctgaacgcgcacccggactcccggtgctgg
ttcgtcagctggagcccgactgggacgctgctggcctcatgtgggggcgacaaggccatc
cggatatggggactagagggtgactcttgggtatgtaagagtgtgcttcaggatggacac
cagcgcactgtgaggagagtggcttggtctccgtgtgggaattacctggcctctgccagc
ttcgacgcaaccacttgcatctggaaaaagaagaacaatgaatttgagagtttgactgtg
ttagaaggacatgaaaacgaggtcaagtctgtggcgtgggccccgtcagggaatctgctg
gcaacatgtagccgagacaagagtgtctgggtctgggaagtggatgaagaagatgagtat
gagtgcgttaccgttgtgaactctcacacacaagacgtcaagcacattgtgtggcaccca
acacaggagctcctcgcttcagccagctacgacaacaacgtttgtatttacaaggaagag
gatgacgactgggagtgtcgggccaccttgcaaggacacacatccacagtctggagtttg
gattttgatgccactggacagcggctggcctcatgcagtgacgaccgcactgtgaagatc
tggaaagagtctcctaatgaaagtggacaaggagacttgtcgtggaagtgtgtttgcact
ctgtcggggtatcatggacgaacagtgtatgatgtcgcctggtgtcggctgactggcgcc
ctggcaactgcctgtggtgacgacgcagtgcgagtgttcaaggaggacgagtccgccgat
ccggaccagccggtcttctcgctggctgctcaggtgaccaaagctcacagccaggatgtc
aactgtgtcgcctggaacccaaaggaggcgggactcctggcctcctgcagcgatgatgga
gagatcagtatctggaggttcaaaccggaagactaa

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