Anoplopoma fimbria (sablefish): 129100914
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Entry
129100914 CDS
T09102
Symbol
smarcad1a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129100914 (smarcad1a)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129100914 (smarcad1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
CUE
DEAD
ERCC3_RAD25_C
HHH_3
Toprim_3
Motif
Other DBs
NCBI-GeneID:
129100914
NCBI-ProteinID:
XP_054466432
LinkDB
All DBs
Position
13:7000872..7014014
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AA seq
1064 aa
AA seq
DB search
MFNLDRFRFDKKAATTANKEQENGSESPESEKENKPAQMKPVKATPKSHARGVVFEEVLT
IDLEEDELLSETKTKTTLTRKSKNPIEKSSKNVASDHTDEEDNELDDKMSVILEMFPQLT
RKELLEVIGSTSTLDGAVAACLLRFGDKEASDQGRKRKQDGSSSSQDSGDIQTSKRSKMV
TVVSDEDDREPSWEKQEAMVRRLQKKFPDQDKEELRMVLQEHDWNVEDALQVLQMFSDPD
DTSFSSPDAEEKKSSKSKSKDKSSQDNRKLKRHKDHRDSKSRINLKDHRNNSETEEESKD
DTDATKDSDGSDSDHSEAANNRSSTSTLSTWLKKSSDSVSSSSSSFVKKTTTSSSLKPSS
SSSTAQMLSRFASGTSIAKNQAAERKKKARASNEQVSSEEENDDEEEAVSSEFEDSDEEL
DCKGGMTDLKKEMLAFFRDASIDELSLIAGCSVKKAQKIVELRPFDDWQSLINVFIKDKG
LSDSLLLGCRVVLKERKVVLGLMSKCKTISSRMVKQVTEVMERGTRSMKQPSLLNSQNQL
KPYQLIGLKWLLLLHEHKLSGILADEMGLGKTIQAIAFLAQLYEKGIDGPHLITVPASTL
DNWVRELKLWCPSLKILVYCGSVEDRRYLRHDLLSDGADCNVIVTTYNMAIGNDSDRGLF
RKLRLKYAVFDEGHMLKNMNSLRYRHLMAINAEHRLLLTGTPLQNNLLELMSLLNFIMPS
MFSSSTTQLSKMFSMKSHEEQSRFERDRISQAKLIMKPFILRRVKSEVLKQLPAKEDKVE
SCPMSEKQQVLYQTLFKKLKASTNGEKRELCNVMMQLRKMANHPLLHRQYYTTEKLKAMS
KLMLKEPTHFDADAALIQEDMEVMSDFELNRLCQQYSSLSSYQLEKNLLLDSGKFHHLTE
LLASHKSKGDRVVLFSQFTMMLDIVEVLLKHLKHRYVRLDGSTPIADRIGLIDEYNTDPD
IFVFLLSTRAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKIVKVIKLISKG
SIEDCMLQLSHKKLKLEQDMTAAEGGEGTIPEDMASLLKASLGL
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacttagaccgttttcgttttgataagaaggcagccacgacagcaaataaagag
caggaaaacgggtccgaaagcccggagtctgagaaggagaacaagccagctcaaatgaaa
cctgtcaaagccacaccaaagtcccatgcccgtggagtggtttttgaggaagtccttaca
attgacttggaggaagatgagctcctctctgaaacaaagaccaaaacaacattaaccagg
aagtccaaaaatcctatagagaagtcatccaaaaatgtggcatcagatcacacagatgag
gaggacaacgaattggatgataaaatgagcgtaatactggagatgtttcctcagttgacg
aggaaggagctgctggaggtcattgggagcacaagcacattggatggtgccgtagctgca
tgccttttaaggtttggtgataaagaagcctcagaccaaggcaggaagagaaagcaagat
ggatccagcagttctcaggacagtggtgatattcaaaccagcaagaggagtaagatggta
acagtggtttctgatgaggatgacagagagccaagctgggagaagcaggaagccatggtc
cgaagactgcagaaaaagtttcctgaccaggacaaagaggagctgaggatggttctgcag
gaacacgactggaatgttgaggatgctctgcaggttctacaaatgttctcagacccagat
gataccagtttcagctcacctgacgcagaagaaaagaaatccagtaaatcgaagagtaaa
gacaagtcaagccaggacaacaggaagttgaagcgccacaaagatcacagagacagtaaa
tccaggataaatctaaaggaccacagaaataatagtgaaacagaggaggagagtaaagat
gatactgacgctacaaaggacagcgacggttcagattcagaccacagtgaagctgcaaac
aacagaagtagcacttccactttgtctacatggcttaaaaaaagttctgactcggtatcc
tcatcctcatcctcttttgtcaagaaaacaactacctcttcctccctgaagccatcctct
tcgtcctctactgctcagatgctgtccagatttgccagtgggaccagtatagctaagaat
caggcagcagagagaaagaagaaggcacgtgcctcaaacgaacaagtcagctctgaggag
gaaaacgacgatgaagaggaagcggtgagcagcgagtttgaggactctgatgaagagctg
gattgtaaaggcggcatgacagatctgaagaaagagatgctggcttttttccgggatgca
tcgatcgatgagctgtctctaatcgctgggtgctctgttaaaaaggcccagaagattgtg
gagctgaggccctttgatgactggcaaagcctgattaatgtcttcattaaggacaaagga
ttgtcggactcattactgctgggctgcagagtcgtcctcaaagagcggaaggtcgtcctg
gggctgatgtccaaatgtaaaaccatttcctcaagaatggtcaaacaggtcactgaggtg
atggagaggggcacaaggtccatgaaacagccaagccttctgaacagccaaaaccagctg
aaaccctatcagctgattggtctaaagtggctgctgcttctgcatgagcacaaactgagt
ggtatcctcgctgatgaaatgggtttggggaaaactatccaggctatagcgtttctggcc
cagctttacgagaagggaatagacggtcctcacctcatcactgtgccggcctcgacattg
gataactgggtcagagagctgaagctgtggtgtccaagcctcaaaattctcgtctattgt
ggatctgtggaagatcgccgctacctcagacacgacctcctcagtgatggtgctgattgc
aacgtcattgtgaccacgtataacatggccatcggaaacgatagcgaccgcggtcttttc
cgtaagctgcgtctgaagtatgctgtgtttgatgaaggtcacatgctgaagaacatgaac
tctctgcgctaccgccacctcatggctattaacgcagagcatcgcttgctgctgacagga
actcctttacagaacaacctcttagagctgatgtctcttctgaacttcatcatgccttct
atgttctccagctccactacacagctctccaaaatgttttctatgaaatcccatgaggag
cagagccgctttgagagggatcgtatttctcaggccaaactcatcatgaaaccttttatc
ctcagacgagtcaagagcgaggtcctcaagcagctgccagccaaggaagataaggtagag
tcctgcccaatgagtgagaaacagcaggtcctctaccagaccctctttaaaaaacttaag
gcttccaccaatggcgagaaacgtgagttgtgtaatgtgatgatgcagttgaggaagatg
gccaaccacccactgcttcatagacagtactacaccacagaaaagctcaaagccatgagt
aaactcatgcttaaggagccaactcactttgatgcagacgctgctctgatccaggaggac
atggaagtgatgtcagactttgagctgaatcgtctttgccagcagtactcctccctcagc
tcctaccagcttgaaaaaaatctcctgcttgactctgggaagttccaccacctcacggag
ctgctggcctcacataaaagcaagggagaccgggtggtgttgtttagtcagttcaccatg
atgctggacattgtggaggtgctgctgaaacatcttaagcatcgttacgtcagactggat
ggatccactcccatagcagacaggattgggttgattgatgagtacaacacggatcctgac
atatttgtgttcctgttgtcaacgcgtgctggtggcctgggcatcaacctcacctccgct
aacgttgtcatcctacatgacattgactgcaatccctacaacgacaaacaggcagaggac
agatgtcaccgtgtaggccagaccaagattgtaaaggtgattaagctgatcagtaagggc
agcatagaggactgcatgctgcagctgagccacaagaaactaaagctggagcaggacatg
actgctgctgaaggtggtgaggggaccatacctgaagacatggcgtctttgctcaaagcc
tcactgggactgtga
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integrated database retrieval system
