Anoplopoma fimbria (sablefish): 129100916
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Entry
129100916 CDS
T09102
Symbol
tcf12
Name
(RefSeq) transcription factor 12 isoform X1
KO
K15603
transcription factor 4/12
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129100916 (tcf12)
Transcription factors [BR:
afb03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
129100916 (tcf12)
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GFIT
Motif
Pfam:
HLH
Response_reg_2
CDC45
Motif
Other DBs
NCBI-GeneID:
129100916
NCBI-ProteinID:
XP_054466438
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Position
2:17534796..17607017
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AA seq
593 aa
AA seq
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MNSNIMGKSQRAPFSNYGRSPGASSVQSSSVRSNVSLASPSPVTPSGKSAAPFYSFTAAN
PRRRPLQEPQPIDPLQTKKVRKVPPGLPSSVYAPSPNSEDFNRDSPSYSSPKPSSSMFAS
TFFDGNHSSSDPWNSSNGISQPGYGGMLTGSSSHMQQSGNYSSLHSHDRLNYPAHSVSPD
INASLPPMSSFHRSNNSTSPFVTAAHTSSVNTADGVMAAANRGNATGSSQTGDALGKALA
SIYSPDHNSSSFPSNPSTPVGSPSPLTATAGAASAGSVVTAAGPPSGRPGTNQWPRAGGQ
TPSSPNYENSLHSLSRMEDRLDRLDDAILVLRNHAVGSTTSLPSDIHSLLGQAQNGPIAA
LGANFPASALVPSRTAAMGGAHTDDAASMNNSHGGLTSSGSTSSADLNRQLETFRGLASA
LAGQLPTTLELKVEKQDKDDMNDNLSTDDKSDDDGDRRDMRTQRTGTRTSIADDEDLNPE
QKAERERERRMANNARERLRVRDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILN
LEQQVRERNLNPKAACLKRREEEKASGGSGDTQQAHTGVHPGLTDTSNPMGHL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgaacataatgggtaaatcacagagggctcccttttcaaactacgggaggagt
cctggagcatctagcgttcagtcttcttctgtaaggtcaaacgtatcgttggcaagtcct
agtccagtgactccgtcagggaagtctgcagctcctttctactccttcactgcagccaat
cctagaagacgtcctctgcaagaacctcagcccatcgatcctctacaaacaaagaaggtt
cgcaaggtccctcctggcctgccttcatctgtgtacgcaccatctccaaactcagaagac
ttcaacagagattcaccttcctactcttctcctaaaccctccagcagtatgttcgcaagc
actttctttgatggcaaccacagttcgtccgacccttggaactcgtccaatgggatcagt
cagcccggctacgggggaatgctcaccggatcttcatctcacatgcaacagtcaggaaac
tacagcagcctgcactcacacgaccgtttgaattaccctgcacactcagtctctccagac
atcaatgccagtcttcctcctatgtccagcttccaccgaagcaacaacagcacttcacca
ttcgtcaccgcagcgcacacctcgtccgtcaacacagccgatggggtcatggctgctgca
aatcgggggaacgctactggaagctcacagactggagatgcattgggcaaggctttagcc
tcgatttactctcctgaccacaatagcagtagttttccatccaacccgtcgacacctgtg
ggttctccttcacctctgacagccacagcaggtgctgcctcagcaggctccgtggtgact
gctgccggccccccgtctggaagaccaggtaccaaccagtggccccgcgctggtggacaa
accccctcttccccaaattatgagaactctcttcactcactgtctcggatggaggatcgt
ctggacagactggatgatgcaatccttgttctgaggaaccatgcagtgggctccaccacc
agtctgcccagcgacatacacagtctgctgggacaagcacaaaatgggccaatagcagcc
ctcggagcaaacttccctgcctccgcattggttccaagtcggacagcagcgatgggtggt
gcccacactgacgatgctgccagcatgaacaacagccatggaggtctaaccagctccggc
tccacatccagcgcagatctcaaccgccaattggaaaccttcagaggtcttgcttcagcc
ctggctggccagttgcctactactctggagctgaaggtggagaaacaggacaaggatgac
atgaatgataatctctccactgatgacaagtcagatgatgacggcgacagaagagatatg
agaacacaaagaacaggcacacgcacgagtatcgctgacgacgaggaccttaatccggag
cagaaggccgagcgtgagcgcgagaggaggatggctaacaacgcccgtgagcgcctaagg
gtgcgagacatcaacgaggccttcaaggagctcggtcgcatgtgccagctgcacctgaaa
agcgagaagccccagactaaactgctcatcctccatcaggctgtggctgtcatacttaac
ctggagcagcaagtccgagagcggaatttgaaccccaaagcagcctgccttaagagaagg
gaggaggagaaagcgtccgggggctccggtgacacccaacaagcccacacaggggtccat
ccaggcctgactgacacgtccaaccccatgggccacctctga
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