Anoplopoma fimbria (sablefish): 129100952
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Entry
129100952 CDS
T09102
Symbol
adamts13
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 13
KO
K08627
a disintegrin and metalloproteinase with thrombospondin motifs 13 [EC:
3.4.24.87
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
afb01002
]
129100952 (adamts13)
Enzymes [BR:
afb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.87 ADAMTS13 endopeptidase
129100952 (adamts13)
Peptidases and inhibitors [BR:
afb01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
129100952 (adamts13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
ADAMTS_CR_3
TSP_1
ADAMTS_CR_2
Reprolysin
TSP1_spondin
TSP1_CCN
Adt-1
Reprolysin_3
Reprolysin_5
Reprolysin_4
Reprolysin_2
CUB
Peptidase_M10
Motif
Other DBs
NCBI-GeneID:
129100952
NCBI-ProteinID:
XP_054466491
LinkDB
All DBs
Position
13:17399998..17411611
Genome browser
AA seq
1367 aa
AA seq
DB search
MIFTTVLCLLLLRPGFAALMSSPLEEHFHHSPSQRDIVSSPDASGNRRLRRWALMPDITH
LELLVVVGPDVQQVHKQDTERYILTNLNIASELLRDMALGANMRVHLVRMIILSEPEPEI
QMSPNITSSLRSLCDWGRRINPSNDTDPLHADLLLYITRYDLVLPNGNNQVRGVAQLGGA
CSSEWSCVITEDTGFDLGITITHEIGHSFGINHDGVGNTCSRSGFMMASDGGYNSVDLTW
SPCSRQQLLTFFSEGKAECVKDLPVLGGSLQDWKPGLYYGVDDQCRIAFGSTARACSFTN
PDLPACRVLSCHINPDDNSSCKRLLVPLLDGTECAPNQWCLKGRCVSLDELSSSVVVHGS
WSNWSGFSHCSRTCGGGVTSRTRKCNNPRPAFGGNDCEGSDIEAELCHQQPCELTQLDFM
AEQCSDTDRHPLYLRPNTASFYTWIPAIGFAKGNEQCRYLCQSKGENFIVSRGSQFVDGT
RCESESPPPFGSTAACLRGKCQLFGCDGMLHSGKVRDVCGVCGGDESSCTLTSDSYTGGQ
ARDYTTFLSLPVNATQVHIVNRAPLFTHMAVMVGDRYIVSGTGSMALTTTHPSPLDDNRL
EYHLHLTPDLLPEMEELLLPGPLSEEINIQVYRKYGKEYGEKTNPNISYHFYVPIRNSDL
TDISPNGKWAVFTTPCSVSCGSGVQKQVYVCVNEDTNNHLEEHYCETTPPPVPLHTTCQL
SLCPPRWDTGTFGSCSASCGGGERVRPVRCVQVHGADVVKVSDSECPPESAPDTVEKCNL
QHCPARWRVSEPGECSAVCGPGEAKRVVSCVWPENGQDVEVDQSVCSLQNKPTDSVPCVV
DVCPIGWQSKGEDQPVLRSGVSPRSKQAPVYVWSPVISQCSKTCGNGTRQVWFSCVDHQT
ILQVMDIHCDASTKPPPQSEACNTSPCPRMWRSKQGVCSVTCGGGVANRVLYCAVETEEE
EEEEVVEDSECSEFLKPTAVVSCNDHSCPARWKVFSASPCSASCDLGVAQRTVSCVQFVH
SKESVVPEESCHAAVRPATTVPCLVQICTFRWEVKPWSQCSVPCGYGIQSRAVSCMGPSK
PEPLSPLFCMHMPKPITIQGCYLGGCVLPTSDVTTKVTPQHPSDHLSPSPTEQTAVPQAT
TTTIPTLEPSACGQLLLEESGTVDLKDVTGRCTVSIGRPLDEIIHIKVQNGSLNCRKKEY
VAFFDRLVFVRRCEQVVGSELTTRTNVLLVRQKLLTPGNGVVFTYNSQKNTKKSHHQDCD
IQLFSPTGVFENPTTSNTNHTCRVLINAPPSVKISIQALHIGLVFNATNSHSTYIMIRDM
DVLKTNVFKGGQLFQWHSSGNMAEIEFHGDYMHAKGSFRAEYSFMRL
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atgatttttacgactgtgctctgtctgctgttactgcggcctggcttcgccgctctaatg
agttctccattggaagagcattttcatcactcccccagtcaaagagacatagtttcatct
ccggatgcctcagggaacaggcggctgcgtcgctgggctctgatgcctgatatcacacat
ctggagctgctggtggtggtcgggcctgatgtccagcaggtccacaagcaggacacagaa
cgatacatcctcaccaacctcaacattgcctcagagctgttgagagacatggccctgggc
gccaatatgagggtgcacctggtccgcatgatcatcctgtcagagccagagccagagatc
caaatgtctcccaacatcacctcctctctcagaagtttgtgtgactggggccgaaggata
aacccctcaaacgatactgacccactacacgctgatctcctgttatacattacacggtac
gacctggtgttgcccaacgggaacaatcaggtcaggggtgtagcgcagctgggaggggct
tgctccagtgaatggagctgtgtgatcacggaggacacgggctttgacctggggatcacc
atcactcatgagattggccacagttttggaatcaaccatgacggagtaggaaacacgtgc
agcaggagtgggttcatgatggcctctgacggaggctacaacagtgtggatctcacctgg
tctccctgcagcagacagcagctgctcacattcttcagtgagggtaaagctgagtgtgta
aaggacctgcctgtacttggaggctccctacaagactggaagcctggtctatactacgga
gttgatgaccagtgccgcatagcttttggtagcactgcaagagcctgctctttcaccaac
cctgacctgccagcttgtcgtgtcctgtcctgtcacattaaccctgatgataacagctcc
tgcaaacgtctccttgttccactgctggacgggacagagtgtgcacctaatcagtggtgt
ctgaaggggcgttgtgtgtctttagatgagctcagctcttctgtggtggttcatggctct
tggtccaactggtctgggttttcccactgctcacggacatgtggtgggggagtcaccagc
cgcacacggaaatgcaataacccaagacctgcttttggagggaatgattgtgagggatcg
gatattgaggctgaactttgtcaccagcagccttgtgagctcacccagctggatttcatg
gcagagcagtgttccgacacagaccgccaccccctctacctgcgaccaaacactgcctcc
ttctacacctggatccctgctataggctttgcaaaagggaatgagcagtgcagatatttg
tgccagtcaaaaggagagaacttcatagtgagtcgtggctctcagtttgtggacgggact
cgctgtgagtcagagagcccgcctccctttggctccacagctgcttgtctaagagggaaa
tgccagctgtttggctgtgatggtatgctgcactctgggaaagtgagggatgtgtgcggg
gtgtgtggtggagatgaatcttcctgcactttgacctctgactcctacactggcggccag
gccagagattatacaactttcctgtctctgcctgtgaatgccacgcaggttcatattgtc
aacagggcacctctcttcactcacatggctgtaatggtgggggatcggtacattgtgtcg
gggacgggcagcatggcactgactacgacccacccctccccactggatgataaccgccta
gagtaccacctccacctgacccctgaccttttgcccgagatggaggagctgctgctgcca
ggacctctgtcagaagaaataaacatacaggtctatcgcaaatatggtaaagaatatgga
gagaaaactaatccaaatattagctaccacttctatgtacctatcagaaacagtgacttg
acagacatctcacctaatggaaaatgggctgtcttcacaacaccctgctctgtctcctgt
ggatcaggtgtacagaagcaggtatatgtctgtgtcaatgaagacaccaacaaccatttg
gaggaacactattgtgaaacaactcctccacccgtaccgctccacacaacctgtcagctg
tccctctgtccccccagatgggatacagggacatttgggtcttgtagtgcctcctgtggt
ggaggagagagagtgcgtcctgtaagatgtgttcaagtacatggagccgacgtggtaaag
gtttcagattctgaatgcccacctgaaagtgctccagatactgttgaaaaatgtaacctg
caacactgtcctgcaagatggcgagtgtcagagccaggggagtgttcagcagtgtgtggg
ccaggagaagcgaaacgcgtcgtgtcatgtgtctggccagaaaatggtcaagatgttgaa
gtggatcaaagcgtttgttctttgcagaacaaaccgactgattctgtgccctgtgtggta
gatgtttgtcccattggatggcaatctaagggagaggaccagcccgtgctcaggtcaggt
gtgtcgccacgctctaaacaggctcctgtgtatgtctggagtcctgttatcagccagtgc
tcaaagacctgtggcaatggaacccggcaggtgtggttctcctgtgtggaccaccagacc
atactccaggtgatggacatccactgcgatgcttctaccaaacctcctcctcagtctgag
gcctgcaacacatctccctgcccccgcatgtggcgctctaagcaaggagtctgcagtgta
acgtgtggaggaggggtggccaacagggtgctgtactgtgctgtggaaacagaagaagag
gaggaggaggaggtggtggaggattcagagtgcagtgagtttctcaaacccacagcagtg
gtttcatgtaacgaccacagctgcccagcaaggtggaaggtgttcagtgcatcgccctgc
tcagcgtcctgtgatttgggggtagctcagaggactgtgtcttgtgtccaattcgttcac
agcaaggagagtgtggtgccggaggaaagctgccatgcagctgtgagaccagccaccaca
gtgccctgcctggtgcagatctgcacctttagatgggaggtgaaaccatggagccagtgt
tcagtaccgtgtggatacgggatccagtccagagccgtgtcctgcatgggcccctctaag
ccggagcccctcagccctctgttttgtatgcacatgccgaaacccataaccatccagggc
tgctatttgggcggctgcgttctgcccacctcagatgtcaccaccaaagttacaccacag
cacccatcggaccatctctctccaagtccaacagagcaaaccgccgttccacaggccaca
acaaccaccatcccaacacttgaacccagtgcatgtggacagctactcctggaagaatca
ggcacggtggatttgaaagacgtgactggccgctgcacagtatccataggtcgacccctt
gatgagatcattcacattaaagtgcaaaatggctctttgaactgcagaaaaaaggagtat
gttgcattttttgaccgactggtatttgtgaggaggtgcgagcaggtagtcggtagtgaa
ctgacaaccagaaccaacgtcctgctggtgcgccaaaaactgctcacccccgggaacggg
gttgtgtttacctacaattcacagaaaaacacgaagaagagccaccatcaggattgtgac
attcagctgttttccccgactggtgtctttgagaatccaacaacgtccaacaccaaccac
acctgtcgagtgctcatcaacgcccctccatcagtcaagattagtatccaagcgctacac
ataggattagtattcaacgccaccaactcccactctacatacattatgatccgggacatg
gatgtcttaaagaccaatgtgtttaaaggcggacagctgtttcagtggcactcctctgga
aatatggctgagattgaatttcatggagactacatgcatgccaaaggaagcttcagagct
gaatattcatttatgcgtctttga
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