Anoplopoma fimbria (sablefish): 129100973
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Entry
129100973 CDS
T09102
Symbol
gtf2h3
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03022
Basal transcription factors
afb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129100973 (gtf2h3)
09124 Replication and repair
03420 Nucleotide excision repair
129100973 (gtf2h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afb03021
]
129100973 (gtf2h3)
03400 DNA repair and recombination proteins [BR:
afb03400
]
129100973 (gtf2h3)
Transcription machinery [BR:
afb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
129100973 (gtf2h3)
DNA repair and recombination proteins [BR:
afb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
129100973 (gtf2h3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
129100973
NCBI-ProteinID:
XP_054466517
LinkDB
All DBs
Position
13:complement(4926726..4930473)
Genome browser
AA seq
300 aa
AA seq
DB search
MATEEEINLLVIVVDVNPIWWGQQAQRETELTLSKCLDAVMVLGNCHMAMARTNRLAVIA
SHCQDSHFLYPSKSWRSGDGSLDDASSSGDGKYELLSVANNLIAEEIRKVMTKTEVMGNS
TDTLLAGTLAKALCYINRVSKEVEAGQDIKSRILVIKAAEDCARQYMNFMNVIFASQKQN
ILIDACVLDSDSGLLQQACDITGGLYLKIPQKVALAQYLLWVFLPDSEQRSQLVLPPPAH
VDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKIQLPQMVKPKKKKLKQTT
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagaggaagaaatcaatttgctggtcatcgttgtggatgtgaatccgatatgg
tgggggcagcaagctcaacgtgagacagagctcaccttgtcgaagtgtctggatgcagtg
atggtgctgggcaactgccacatggccatggccaggacgaacaggctggctgttatcgcc
agccactgtcaggacagtcacttcctgtatcccagtaagagctggagatcgggggacggc
agtttggatgatgcatcctccagtggggatggaaaatatgaactcctgtcagttgcgaat
aacctaattgctgaagagatcaggaaggttatgacaaaaactgaggtgatgggaaattca
accgatactttgttggctgggacacttgccaaagctctctgctatattaacagggtctca
aaagaggttgaagctggacaggacataaaatcaagaatattggttataaaagcagccgag
gactgtgcccgccagtacatgaacttcatgaatgtcatttttgcttcccaaaagcagaac
atcctgattgatgcctgcgtgttggactcagactcaggtctcctgcagcaggcttgcgat
ataactggaggattgtacctcaagataccacagaaagttgccctggcacaataccttttg
tgggtgttcctgcctgactctgagcagcgttcacagctggtgctgccaccgcctgcacac
gtggactacagagctgcatgtttctgccaccgtaacctcattgagattggctacgtgtgc
tcagtttgtctgtcaatattctgcaacttcagccccatctgcacaacctgcgagactgcc
ttcaaaatccaactaccacagatggttaagcccaaaaagaagaaactcaagcaaactaca
tga
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