KEGG   Anoplopoma fimbria (sablefish): 129100999
Entry
129100999         CDS       T09102                                 
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03022  Basal transcription factors
afb03420  Nucleotide excision repair
afb04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    129100999 (cdk7)
  09124 Replication and repair
   03420 Nucleotide excision repair
    129100999 (cdk7)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    129100999 (cdk7)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:afb01001]
    129100999 (cdk7)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:afb03021]
    129100999 (cdk7)
   03019 Messenger RNA biogenesis [BR:afb03019]
    129100999 (cdk7)
   03400 DNA repair and recombination proteins [BR:afb03400]
    129100999 (cdk7)
Enzymes [BR:afb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     129100999 (cdk7)
    2.7.11.23  [RNA-polymerase]-subunit kinase
     129100999 (cdk7)
Protein kinases [BR:afb01001]
 Serine/threonine kinases: CMGC group
  CDK family
   129100999 (cdk7)
Transcription machinery [BR:afb03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     129100999 (cdk7)
Messenger RNA biogenesis [BR:afb03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     129100999 (cdk7)
DNA repair and recombination proteins [BR:afb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     129100999 (cdk7)
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr Seadorna_VP7 ABC1 Kinase-like APH
Other DBs
NCBI-GeneID: 129100999
NCBI-ProteinID: XP_054466553
LinkDB
Position
13:complement(3085838..3092833)
AA seq 343 aa
MAHDVKSRNKRYEKLDFLGEGQFATVYKARDKTTDTIVAIKKIKVGHRTEAKDGINRTAL
REIKLLQELHHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDTSLVLTPANIKAYILM
TLQGLEYMHHHWVLHRDLKPNNLLLDGSGVLKLADFGLAKAFGSPNRVYTHQVVTRWYRS
PELLFGARMYGVGVDMWAVGCILAELLLRIPFLAGDSDLDQLTKIFEALGTPTEETWPGM
SSLPDYVSFKIFPGTPLEHIFSAAGDDLLELLQGLFTFNPSTRTTATQALKMRYFSNRPG
PTPGQQLPRPNCSAEALREKDTIGLKRKCEGLETTVMKKKLIF
NT seq 1032 nt   +upstreamnt  +downstreamnt
atggcgcatgatgtgaaatccagaaacaaacgatacgagaaactggatttcctgggagag
ggtcagttcgccacagtgtacaaagccagggacaaaaccactgataccatagttgccatt
aaaaagattaaggttggccacagaactgaggctaaagatggtattaataggactgctctt
cgagagatcaaactgctgcaggaactgcatcatccaaacatcattgggctgctggatgcc
ttcggacacaaatctaacatcagcctggtgtttgatttcatggaaacagacttggaggtg
atcatcaaagacaccagcctagtcctgactccagccaacatcaaagcctacatactcatg
actcttcagggattagagtatatgcaccaccactgggtcctacacagggatctgaagccc
aataatctgctgttagacggtagtggagtgttgaagttggctgattttggtttggccaaa
gcatttggcagccccaacagagtctacacacatcaagttgttaccagatggtaccgctcc
cctgagctcctgtttggtgccagaatgtatggtgtgggtgtcgacatgtgggcagtagga
tgcatcttggcagagttactccttcggataccattccttgctggagactccgatctggac
cagctgacaaagatctttgaggctcttgggacgcctacagaagagacatggcctggaatg
agtagtctaccagattatgtgtccttcaaaatatttcctggcacaccactggaacatata
tttagtgcagctggagacgacctactagagctgctacagggtctgttcacctttaacccc
tcgacgaggaccacagctacacaggctctgaaaatgaggtacttcagtaatcgacctggt
cccacacctggtcaacaactcccccgacccaactgttcagctgaggctctgagggagaag
gacacaatcgggctcaagaggaaatgcgagggcctggagacaactgtgatgaagaagaag
ctcattttctga

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