Anoplopoma fimbria (sablefish): 129101012
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Entry
129101012 CDS
T09102
Symbol
msi1b
Name
(RefSeq) RNA-binding protein Musashi homolog 1b
KO
K14411
RNA-binding protein Musashi
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129101012 (msi1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129101012 (msi1b)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
129101012 (msi1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_PARP14_1
PHM7_cyt
NID
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
129101012
NCBI-ProteinID:
XP_054466565
LinkDB
All DBs
Position
13:complement(18464303..18482260)
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AA seq
349 aa
AA seq
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METEGSQTSLSTTDSPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRS
RGFGFVTFVDQAGVDKVLAQTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNT
TIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE
CKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQTATYTSRSYAGITPGYT
YQFPEFHLERTPLLTSPHPPELTAIPLTAYGPMAAAAAAAAVVRGSNQSRAGGFLGTSSP
GPMADLYGAASQESAVSSYLSAASPAPSTGFSHGLGGPLIATAFTNGYH
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggagacggaagggagccagaccagcctgtccaccacggactcccctcacgacccctgc
aaaatgttcataggtggactcagctggcaaacaacacaagagggcttgaaggagtacttc
tgcaagtacggcgaggtgaaggagtgtatggtgatgcgagatccggttactaagcgctcg
agagggtttggattcgtcacctttgttgatcaggccggcgtggataaagttttggcccaa
accaggcacgagttggactcaaaaacaatcgatccaaaggttgcattccctcgcagagct
cagcccaagttagtgactcgaaccaagaagatctttgtgggaggcctgtcagtgaacaca
accatcgaggacgtgaaacagtactttgaccagtttgggaaggtcgacgatgccatgctc
atgttcgacaagaccaccaacagacacagagggttcggctttgtgacatttgagaacgag
gatgtggtggagaaagtgtgcgagatccacttccacgagatcaacaacaaaatggtggag
tgtaagaaagctcagcccaaggaggtgatgtcccccacgggctcagccagggggcgctct
cgtgtgatgccctatggaatggacgccttcatgctgggcattggtatgctaggttatcca
ggcttccagacagccacctacaccagtcggagctatgctggcatcactcctggatacacc
taccagttccctgagttccacttagagaggactccccttctgacttcaccccacccccct
gagctcacagccattcctctgacagcatatggacccatggcagcagcagcggcagcagca
gcagtagttagaggctctaaccagtctcgcgcagggggatttttaggtaccagcagcccg
gggccgatggcggacctttatggggcagccagtcaggagtcagctgtcagcagttacctc
agcgctgcaagccctgccccaagcactggattcagccacggtttggggggccctttgatc
gccacggccttcaccaacggctatcactga
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