Anoplopoma fimbria (sablefish): 129101043
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Entry
129101043 CDS
T09102
Symbol
poli
Name
(RefSeq) DNA polymerase iota isoform X1
KO
K03510
DNA polymerase iota [EC:
2.7.7.7
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
129101043 (poli)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afb03400
]
129101043 (poli)
Enzymes [BR:
afb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
129101043 (poli)
DNA repair and recombination proteins [BR:
afb03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
129101043 (poli)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IMS
IMS_C
UBM
IMS_HHH_1
IMS_HHH
DNA_pol_lambd_f
Cdd1
Motif
Other DBs
NCBI-GeneID:
129101043
NCBI-ProteinID:
XP_054466614
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All DBs
Position
13
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AA seq
714 aa
AA seq
DB search
MDNSEDEMEEDETEWHNSFVDSVPDPSLNKTSGPTPAHRVILHFDLDCFYAQVEMIRNPA
LREVPLGIQQKYIIVTCNYVARDLGVTKLMAVTAAKEKCPQLVLVKGEDLTHYREMSYKL
TELLMSYCPLVERLGFDENFMDVTKMVDRRLAETPESDSLSFKGHVYNHCSADVKASDHP
RLALGSHIAAELREAMHSKLGLTGCAGIATNKLLAKLVSGSFKPNQQTTLLPENVDDIMG
CLSGVRKVPGVGHQTAKRLQALGLVSVKDLQLFPLSDLEKEFGGPSAQRLKNLALGVDES
PVAPTGAPQSLSDEDSFKKISSTKEVLEKIQELLSSLAERMHKDGRQPQTFRLTIRRYSA
TNKWFSRESRQCPIPNHIGQKITSDSSDDAVVQLVSLAMKLFHKMVDSSAAFHLTLINVC
FSNLQTRGAAVSGKGSITSFFTHSTSPKKTQIFSSQSQDASSQSGNTDHRFSPHSVITQL
TPPQKTVTTESPCSSGASLYGFKRKQRPFVAAEDPRLQKESRSTTRSEPEITVTHRLPPN
VDPEVFRLLPEEIQKELLSPAYTNSLPGLSTSSPAVDDVPYVRKNKSPQSFSHSQNIKDT
KEAVEKIDSSDRPTSVDKRPEGTSAFQGEMVMEEGSLSFPRSADCEFPGNVDPKVFSELP
PDVQEELMSGWKQQKPVLKTPSSRKPARSLMTKDRKAAGKGSQANNLLKYFKPS
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggataacagcgaggatgagatggaagaggatgagactgagtggcataacagtttcgtg
gattcagtccctgatccaagcctcaataaaacatcaggaccaacacctgctcacagagtc
attctgcattttgacctggactgcttctatgctcaggtggaaatgatcagaaaccctgca
ctgagagaggtccctttaggtattcagcagaaatacatcatagtcacctgcaactatgtg
gcaagagatctcggcgtcaccaagttgatggctgtgactgctgctaaggagaaatgtcct
cagctggtgctggttaaaggagaagacctgacacactacagagagatgtcgtataaactg
acagagctgctgatgtcctactgtccactggtagagaggcttgggtttgatgaaaacttc
atggacgtcacaaagatggtagatagaaggctagcagagacaccggagtccgacagcctt
tcatttaaaggacacgtctacaaccattgcagtgcagatgttaaagcaagtgatcatcca
cggttggctttaggttcacacattgcagcagagctaagagaagccatgcacagcaaactg
ggtctgaccggctgcgctggaatcgccacgaacaagctactggccaaactggtgtcgggc
tcctttaaacccaatcagcaaaccaccctgctgcccgagaacgttgatgacatcatgggc
tgtctgagtggtgtccgcaaagtgccgggggtcggtcaccaaactgctaagcgacttcaa
gccctgggattggtcagtgtgaaagatctccagctcttcccgttgagcgacttggagaag
gagtttggaggtcccagtgcccagcgcctgaagaatctggccctcggtgttgatgaatcg
cctgtcgcccccaccggggcccctcagtctctcagtgacgaagactccttcaagaaaata
tcgtcaaccaaagaagttttggaaaagattcaagaactcctgagcagtctggcggagagg
atgcacaaagatggcaggcagcctcaaaccttccggctgaccatccgcagatactcagcg
accaacaagtggttcagtcgggagagccgacagtgtccgatccccaaccacataggacag
aagatcacctctgacagcagtgatgatgccgtggtacagctggtctcgttggccatgaag
ctcttccacaagatggtggacagcagcgccgccttccacctcaccctcatcaacgtctgc
ttcagtaacctgcagaccaggggagctgccgtcagcggaaagggctccataacgtcattc
ttcacacacagcacgtctcccaaaaaaacacaaatcttctcatcgcaaagccaggatgct
tcctctcagagtgggaacacggatcatcggttcagcccacacagcgtgattactcaactc
acccctcctcaaaagacagtaaccactgaaagcccttgtagctccggggcatcattatat
gggtttaaaagaaaacagaggccttttgttgctgcagaagaccctcggcttcagaaagaa
tcccgcagcacaacgaggtcggagccagaaatcacggtgacacatcgattgcccccgaac
gttgaccccgaagtgttcaggcttctccctgaggaaatccagaaggagctgttatctccc
gcctacacaaactctctccccggtctttcaacgagctcacctgcagtcgacgatgtcccc
tacgtaagaaaaaacaagtctccacagtcatttagtcactcacaaaatattaaagacact
aaagaggctgtggagaaaattgactcatccgacaggccgacgagcgtggataagaggcct
gagggcacaagtgcctttcaaggggagatggtcatggaagaagggagcctgtcattccct
cggtctgctgactgtgagttcccgggaaatgtggaccctaaggtgttttctgagcttccg
cccgacgttcaggaggagttgatgtcgggatggaagcaacagaagccggtcctgaagacg
ccctcgtccaggaaaccagcgagaagcttgatgaccaaagacagaaaagctgcaggaaaa
ggcagtcaggcaaacaatctgttaaagtatttcaaacccagttag
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