Anoplopoma fimbria (sablefish): 129101049
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Entry
129101049 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: far upstream element-binding protein 3-like
KO
K13210
far upstream element-binding protein
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129101049
03041 Spliceosome [BR:
afb03041
]
129101049
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
129101049
Spliceosome [BR:
afb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
129101049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
FUBP_C
Secretin_N
Motif
Other DBs
NCBI-GeneID:
129101049
NCBI-ProteinID:
XP_054466623
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All DBs
Position
13:complement(28696603..28717804)
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AA seq
542 aa
AA seq
DB search
MMAELVQGQASMSQPGLKADGLADVLQRARQMVGKMGGEAMSHLNSSSGGVEPSLYYQGQ
KRPGEDGVGNQLAAMGHQSRVITEDYKVPDRMVGFIIGRGGEQITRIQLESGCKIQIAAD
SGGLMERPCSLTGTPESIEQAKRLLVQIVDRCRNGPGFHGDGEGGASVQEMLIPASKVGL
VIGRGGDTIKQLQERAGVKMMMIQDGPMPTGADKPLRISGDPYKVQAARELVLEVIREKD
GDFRSGRNDFSARLGGASLDVPVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKADDGISP
ERVAMVMGQPDRCQHAVHLINELIQTAQERDGFGSALRSGRVRGRGDWTMGSPGPLQEVT
YTIPADKCGLVIGKGGETIKSINQQSGAHVELQRNPPPXTDPNTRVFTIRGTAQQMDLAR
QLIDDKIGGSGIMSNGGFGFSPFTQGPAAHQNCGSGQTFLTGVWGNTYQTSWQNPGQQDP
GQQNQPQSLMADYSKAWEDYYKKQSQSSQQSSVPDYSAALAEYYRTQPYLWNAAQIQNDE
QQ
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggagctggtgcagggacaggcctccatgagccagccggggctgaaggccgac
ggcctggccgacgttctccagagggcccggcagatggtcggtaagatgggcggagaagcc
atgtctcacctcaacagctcctcaggaggtgtggagccatcgctgtactaccagggccag
aaacgacccggagaggacggagtaggtaaccagctagcagccatggggcatcaaagcagg
gtaatcacagaggattacaaggtccccgacaggatggtcggcttcattatcggacgagga
ggtgaacagatcaccaggatccagttggagtctggctgcaagatccagattgctgctgac
agcggcggtctgatggagcggccatgttccctgactggaactccagagagcatcgagcag
gcgaagcgtctgttggtccagatcgtggatcgctgcagaaacggtccgggtttccacggc
gacggtgaaggcggagcctctgtgcaggagatgctgatcccagccagtaaggtggggctg
gtgattggccgaggaggagacaccatcaaacagctgcaggagcgagcgggggtgaagatg
atgatgatccaggacggtccgatgccgaccggagccgacaaaccgctccgcatctctgga
gacccgtacaaagtccaggcagcgagggagctggtgttggaggtgatccgggagaaggac
ggagacttcaggtcgggacgcaacgacttcagcgcccgcctgggaggagccagcctggac
gttccagttccacggttcgctgtcggcatcgtgatcggcaggaacggagaaatgatcaag
aagatccagaacgatgccggagtccgaatccagtttaaagcagatgatggcatcagtcca
gagcgtgttgccatggtgatgggtcagccagaccgctgccagcatgctgtccacctcatc
aacgagctgatccagaccgcacaggagcgtgacggcttcggctcggccctgcggagtggc
agggtcagaggtcgtggagattggactatgggttctccaggtccgctacaggaagtgacc
tacaccatccccgctgacaagtgtggcctggtcatcggcaaaggtggagaaaccataaag
agtattaaccagcagtctggagctcacgtggagctgcagaggaaccccccccctnccacc
gaccccaacacccgggtcttcaccatcagaggcaccgcccagcagatggacctggcccgc
cagctcatagacgacaagatcgggggttcagggatcatgagtaacggaggttttggattc
agtcccttcactcagggccctgctgcacaccagaactgtggcagcggtcagaccttcctg
accggcgtttggggaaacacctaccagaccagctggcagaaccctggacaacaagaccct
ggtcaacagaaccaacctcagagcctgatggccgactacagtaaggcctgggaggactac
tacaagaaacagagtcagtcttctcagcagagttcggttccagactactctgcagcatta
gcagaatactacagaactcagccctacctgtggaacgccgcccagatacagaacgacgaa
caacaatga
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