Anoplopoma fimbria (sablefish): 129101054
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Entry
129101054 CDS
T09102
Symbol
ddx31
Name
(RefSeq) probable ATP-dependent RNA helicase DDX31
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
afb01009
]
129101054 (ddx31)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afb03009
]
129101054 (ddx31)
Enzymes [BR:
afb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129101054 (ddx31)
Protein phosphatases and associated proteins [BR:
afb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129101054 (ddx31)
Ribosome biogenesis [BR:
afb03009
]
Eukaryotic type
Pre-60S particles
Helicases
129101054 (ddx31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
DUF2481
Motif
Other DBs
NCBI-GeneID:
129101054
NCBI-ProteinID:
XP_054466627
LinkDB
All DBs
Position
13:28944164..28955229
Genome browser
AA seq
741 aa
AA seq
DB search
MMMSSADDQLCLNICSNSSSSSSSRRKPLTAQQRWARKKQTAEKRRIDSSEEEKKKKRGS
SNQRLDDSEEEEQEEEQEDTQPDDDDHRTPPKKKKKKDTGKDAVKETRSIQTSSLFKHNP
EILEILRPVVSQLKEKIFTSDSFSDMDLHPHLVATLNKVLNVSTVTSVQKQTIPVLLSGR
DAVVRSQTGSGKTLSYAVPVVQSLQAVQQKVSRSDGPLAVVIVPTRELAQQTFQIFQKLL
KPFTWIVPGVLMGGEKRKSEKARLRKGINILVSTPGRLVDHIKNTLSIAFSGVRWLILDE
ADRTLDMGFEKDLTVILNSLNSTGPSRQNVLLSATLTHGVTRLADVCLNDPVNIHVSGTA
SSDLTTTSSAVTSDPSTAGQSESFALPEALKQYVVVVPSKIRLVCLAAFILDKCKFSQNN
KLIVFTSSCEAVEFLHGLFSSVLSGPSTNQKPRLSFLRLHGNMKQEERSEVFQKFSVSQS
GVLLCTDVAARGLDLAQVTWIIQYTPPTTAAEYVHRVGRTARIGGTGSSLLFLTPAETAF
ITELANHNISLSELKLQDILSSLMIDDTYKGRGRYHSQTSSKALEQETRERATVLQTEFE
NFVHSDVESVQNAKRALQSFLRAYTAYPARLKHIFHIRSLHLGHTAKSFGLRDAPQGLKA
AAGPGTRTHNKNHDKNQNHDKNQNHDKGTGSQTAGAKRFSTRQLLHSEFSSGLEDAKKKK
KKKTKKTKTFGRSGEEEEEEE
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgtcatcagccgacgaccagctgtgtctgaacatctgcagcaactcttcctcc
tcctcttcctccaggaggaagcctctgactgctcagcagagatgggccagaaagaaacag
acggcagagaagaggaggatcgactcctcggaggaggagaagaagaagaagagaggctcc
tccaatcagaggctggatgactcagaggaggaggagcaggaggaggagcaggaggacact
cagcctgatgatgacgaccacaggacaccaccgaagaagaagaagaagaaggacacaggg
aaggacgcagtgaaggaaacgaggagcatccagacttcctctctgttcaaacacaaccca
gaaatcctagagatactcagaccagttgtctcccagttaaaggagaagattttcaccagt
gactcattttcagacatggaccttcatccacacctggtggcgacactgaacaaagtcctg
aatgtttccacggtgaccagtgttcagaaacagactattccagttcttctgtcggggcga
gatgctgtggttcgttctcagactggttcaggtaagaccctgtcctacgcggtccccgtg
gtccagagtctgcaggcggtccagcagaaggtcagccggtctgatggtcctctggccgtc
gtcatcgtccccaccagagagctggcccagcagacgttccagattttccagaagctcctg
aagccgttcacctggatcgtccctggagtcctgatgggaggagagaagaggaagtcagag
aaggccaggcttcgtaaaggaatcaacatcctggtgtcgactcctggacgtctggtggat
cacatcaaaaacacgctgagcatcgccttcagcggcgtccgctggctcatcctggacgag
gccgaccggacgttggacatgggttttgagaaggatctgaccgtcatcttaaacagtctg
aactctactggaccgagcagacagaatgtcctgctgtcagctacgttaactcacggtgtg
actcggttagcagacgtttgtcttaacgacccggtcaacatccacgtctctggcaccgcc
tcctctgacctcaccaccaccagctctgctgtgacctctgaccccagcacagccggccaa
tcggagagctttgctctgcccgaggctttgaagcagtacgtggtggtggttcccagtaag
atccgactggtctgtctggctgctttcatactggacaaatgcaagttttctcagaacaac
aaactcatcgtcttcacttcgagctgcgaggccgtcgagttcctccacggactcttcagc
tccgtcctctccgggccctccaccaatcagaagcctcggctcagcttcctgcgtctccat
ggcaacatgaagcaggaggagcgctcggaggtcttccagaagttttcagtgtctcagagt
ggagttctgctgtgtacggacgtggcagccagaggtctggaccttgcacaggtcacctgg
atcattcagtacactcctccaacgacggcggcggagtacgttcatcgagtgggtcggacg
gctcgtattggaggaacaggaagcagcctcctcttcctcactcctgctgagaccgccttc
atcaccgagctggccaatcacaacatcagcctgtcagagctgaagctgcaggacatcctg
tccagtctgatgattgatgacacctacaaggggcggggcagataccacagccagacctcc
tctaaggctctggagcaggagaccagagagcgggcgacggttctccagacggagtttgag
aactttgttcactctgacgttgagtcggttcagaacgctaagagagcgctgcagtccttc
ctgcgggcgtacaccgcctaccccgcccgcctcaaacacatcttccacatccgctcgctc
cacctgggacacacggccaagagcttcggcctgagagacgctccgcagggcctcaaggcc
gccgcgggacccgggaccaggacccacaacaagaaccacgacaagaaccagaaccacgac
aagaaccagaaccacgacaaggggaccggcagccagactgctggagcaaagaggttctcc
acccgtcagctgctgcactccgagttctccagcgggttggaagacgccaagaagaagaag
aagaagaagacgaagaagacgaagacatttggtcggtcaggagaggaggaggaggaggag
gagtag
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