Anoplopoma fimbria (sablefish): 129101064
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Entry
129101064 CDS
T09102
Symbol
pcna
Name
(RefSeq) proliferating cell nuclear antigen
KO
K04802
proliferating cell nuclear antigen
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03030
DNA replication
afb03410
Base excision repair
afb03420
Nucleotide excision repair
afb03430
Mismatch repair
afb04110
Cell cycle
afb04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129101064 (pcna)
03410 Base excision repair
129101064 (pcna)
03420 Nucleotide excision repair
129101064 (pcna)
03430 Mismatch repair
129101064 (pcna)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afb03032
]
129101064 (pcna)
03400 DNA repair and recombination proteins [BR:
afb03400
]
129101064 (pcna)
DNA replication proteins [BR:
afb03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
129101064 (pcna)
DNA repair and recombination proteins [BR:
afb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
129101064 (pcna)
MMR (mismatch excision repair)
Other MMR factors
129101064 (pcna)
TLS (translesion DNA synthesis) factors
Other TLS factors
129101064 (pcna)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_C
PCNA_N
Rad1
Rad9
Hus1
Herpes_UL42
Motif
Other DBs
NCBI-GeneID:
129101064
NCBI-ProteinID:
XP_054466650
LinkDB
All DBs
Position
13:9817489..9821012
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AA seq
260 aa
AA seq
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MFEARLVQGSILKKVLEALKDLITEACWDVSSSGISLQSMDSSHVSLVQLTLRHDGFDSY
RCDRNLAMGVNLSSMSKILKCAGNEDIITLRAEDNADTLALVFETLNQEKVSDYEMKLMD
LDVEQLGIPEQEYSCVVKMPSGEFARICRDLSQIGDAVMISCAKDGVTFSASGELGTGNV
KLSQTSNVDKEDEAVTIEMNEPVQLIFALNYLNFFTKATPLSKTVTLSMSADIPLVVEYK
IADMGHVKYYLAPKIDEEAS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaggctcgcctggtccagggatccatcctgaagaaggtgctggaggctctgaag
gacctgatcacagaagcctgctgggatgtcagctcgtccggcatctccctgcagagcatg
gactcctctcacgtctcgctggtgcagctcaccctgcggcacgacggcttcgactcgtac
cgctgcgacagaaacctggccatgggagtcaacctcagcagtatgtcaaaaatcctgaag
tgtgcaggaaatgaagacatcatcaccctcagagcagaagacaatgcagacacactcgcc
ctggtgtttgagacgctcaaccaggagaaagtctcagattacgagatgaagttgatggac
ctggatgtggagcagctcggcattccagagcaggagtacagctgtgtggtgaagatgccc
tctggggagtttgcccgtatctgccgcgacctttcccagatcggtgacgctgtcatgatc
tcctgcgccaaggacggagtcacgttctctgcctcgggagagctgggcacaggaaacgtc
aagctgtcccagaccagcaatgtggacaaagaggacgaggctgttactatcgagatgaat
gaacccgtccagctgatctttgccctcaactacttgaacttcttcaccaaggcgacgccg
ctgtccaagacggtcaccctcagcatgtctgctgatatccccctcgtggtggagtacaag
attgccgatatgggacacgtcaaatactacttggcacccaaaatcgacgaagaagcttcc
taa
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