Anoplopoma fimbria (sablefish): 129101080
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Entry
129101080 CDS
T09102
Symbol
tars1
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
129101080 (tars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
afb01007
]
129101080 (tars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afb03016
]
129101080 (tars1)
Enzymes [BR:
afb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
129101080 (tars1)
Amino acid related enzymes [BR:
afb01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
129101080 (tars1)
Transfer RNA biogenesis [BR:
afb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
129101080 (tars1)
Prokaryotic type
129101080 (tars1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
129101080
NCBI-ProteinID:
XP_054466678
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All DBs
Position
13:11227604..11252049
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AA seq
762 aa
AA seq
DB search
MLHQNRNIRQRHHPLPRTSTVLPGLAKVISQSEVNFSLVMADQAVVEKMSELKVDEKKKG
GNEGAKDGGKKKTKGAAGDSGSRAELTPAPQYIDERLTLYTKLKAEHEALMAERAAKDSR
AIKVTLPDGKVVDAESWKTTPYQVACGISQGLADNTVIAKVNNGVWDLDRPLEEDCSLQL
LKFDDEEAQAVYWHSSAHILGEAMEKVYGGCLCYGPPIESGFYYDMFLENEGVSSNDFPC
LETLCKKIIKEKQPFERLEIKKETLLEMFKYNKFKCRILNEKVTTPTTTVYRCGPLIDLC
RGPHVRHTGKIKALKIHKNSSTYWEGKADMETLQRIYGISFPDSKMLKEWEKFQEEAKNR
DHRKLGREQDLFFFHDLSPGSCFFLPKGAFIYNTLIEFIRSEYRKRGFQEVVTPNIYNSK
LWQTSGHWQHYSDNMFSFEVEKETFALKPMNCPGHCLMFDHRPRSWRELPIRMADFGVLH
RNELSGALTGLTRVRRFQQDDAHIFCTMDQIEEEIKGCLDFLRTVYEVFGFTFKLNLSTR
PEKFLGDPEVWVQAEKQLENSLNDFGEKWVLNPGDGAFYGPKIDIQIKDAIGRYHQCATI
QLDFQLPIRFNLSFVSQDGDDKKRPVIIHRAILGSVERMIAILTENYGGKWPLWVSPRQV
MVVPVGPTCEEYAQKVKQEFHNSGFMTDVDLDPGCTLNKKIRNAQLAQYNFILVVGEKEK
TSNTVNVRTRDNKVHGERTVEECIERLKQLKTCKSRNAEEDF
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgttgcatcagaatcgcaatatccggcaacgtcatcatcctttaccccgcaccagcact
gtactgccgggacttgcaaaagttatctctcaaagtgaggtgaacttttcacttgttatg
gctgaccaggctgtcgtggagaaaatgagcgaattgaaagtggacgagaagaaaaagggg
gggaatgaaggcgctaaagatggaggaaagaagaagactaaaggtgctgctggggattct
ggaagcagggctgagctgacaccagcaccccagtacattgatgagcgacttactctctac
actaagctgaaagccgagcatgaagctctcatggcagagagggctgcgaaggacagccga
gccatcaaggtgactctgcccgacggaaaggtggtggacgccgagtcctggaagaccaca
ccataccaggtggcctgtggaatcagccaaggcctcgccgacaacacagtgattgctaag
gtgaacaacggcgtgtgggacctggacagacctttggaggaagactgcagccttcagctg
ctcaagtttgatgatgaggaggctcaagctgtttactggcactccagcgcccacatcttg
ggtgaagccatggagaaggtgtacggaggctgcctctgctacggcccccccatcgagagc
ggcttctactacgacatgttcctggagaacgagggcgtatcgagcaatgactttccgtgt
ctggagaccttgtgcaagaaaattatcaaggagaagcagccgttcgagaggctggagata
aagaaggaaactctgttggaaatgttcaagtacaacaagttcaagtgccgcattctgaat
gagaaggttaccactcccaccaccacagtttacaggtgtggtcccttaattgacctctgt
cgtgggccccatgtgagacatacaggaaagatcaaggcacttaagatccacaagaattcg
tcgacatactgggagggtaaggcggacatggaaaccctccagaggatctacggaatctcc
ttccctgactccaaaatgctgaaagagtgggagaagtttcaggaggaagccaagaacaga
gatcaccgcaaactgggccgggagcaggacttgttcttcttccacgacctgagtccgggg
agctgcttcttcctccctaagggtgccttcatctacaacaccctgatcgagttcatcaga
agtgagtacaggaagaggggtttccaggaggtggtgacgcccaacatctacaacagtaag
ctgtggcagacctccggccactggcagcactacagtgacaacatgttctccttcgaggtc
gagaaggagaccttcgccctcaaacccatgaactgcccgggacactgtctgatgtttgat
caccggccgcgctcctggagagagctgcccatccgcatggccgactttggcgtcctgcac
aggaacgagctgtcaggagccctgacgggcctcacccgggtccgccgcttccagcaggac
gacgctcacatcttctgcaccatggaccagattgaggaggagatcaagggctgcttggac
ttcctgcggactgtgtacgaggtgttcggcttcacgttcaaactcaacctttccaccaga
ccagagaagttcctgggggacccggaggtctgggtccaagcagaaaagcaactggagaac
agcttgaatgactttggggagaaatgggtcctgaaccccggtgacggagcgttctacggg
ccgaagatcgacatccagatcaaggacgccatcggccgctaccatcagtgtgccacgatc
cagctggatttccagctgccgatccgcttcaatctctcctttgtcagccaagatggcgac
gacaagaagagaccagtgatcatccacagagccatcctgggatcagtagagaggatgatt
gcaattctgactgagaactacggaggcaaatggccgctgtgggtctctcctcgtcaggtg
atggttgtacccgtgggcccgacctgtgaagaatatgctcagaaggtcaagcaggagttc
cacaacagcggcttcatgaccgacgtggatctggaccccggctgcactctgaacaagaag
atcagaaacgcacagttggcgcagtacaacttcatcctggtggtgggagagaaggagaag
acgagcaacaccgtgaacgtacgcacccgggacaacaaagtccacggcgagcgcactgtg
gaggagtgcatcgagcgcctgaagcaactcaagacctgcaagagtcggaacgctgaagag
gacttctga
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