Anoplopoma fimbria (sablefish): 129101087
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Entry
129101087 CDS
T09102
Symbol
zfr
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger RNA-binding protein
KO
K13203
zinc finger RNA-binding protein
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afb03041
]
129101087 (zfr)
Spliceosome [BR:
afb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
129101087 (zfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_C
DZF_N
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
129101087
NCBI-ProteinID:
XP_054466683
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All DBs
Position
13:complement(11393449..11413594)
Genome browser
AA seq
1084 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHGAAAQYSQQPGAGVAYTHPTTVASYTV
HQAPVAAHTVAAAYAPTAATLAVARPAPVAVAAATASAYGGYQPTHAATDYGYPQRQQEV
PPPPPPVTSQNYQDTYSYVRSTAPAVAYDSKQYYQQATATAAVAAAQPQPSVADSYYQTA
PKPGYSQGVTSYTQSQQSRQVTVIKPAAPNPASSTFSIYPVTSAVQPVAAAAVPSYSQSP
TYSTNAVTYSGTSYSGYEAAVYSAASSYYHQQQQQQQQQQQQQQQKQAVAAVAATAAWTG
NTFTKKPPFQSKQLRPKQPPKPPXIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKVS
QSSSSTSSGSGGGALARNAQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKP
IPSTEPSMVTQTSSSTTAAPSKTTTATLSSSGTSGSLCMSATSSSSASNTSSSASYLKPV
NIVNSGMAGVKNPLTNSLSAANSVSVGKKVNAPKINFVGGNKLQTTAKMDESKVEASKPA
TPSSATHDPKTDVSDSLSTSALAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFN
DPNAKEMHLKGRRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEE
ERWRMEMRRYEEDMYWRRMEEEQHHWDDRRRMPDGGYPQGPPGPPGLLGVRPGMPGLQPQ
GPVPPRRPDSSDDRYVMTKHAAIYPSEDELQSIQKIVSITERALKLVSDIITDQDKAKDG
EEKEEKEPAKDRALKGVMRVGVLAKGLLLRGDKNVNLVLLCSEKPTKSLITRIVEHLPKQ
LTVVTPEKYEVSGSAQEAAIILTSCTDPKMRVTITLTSPLIREEGCRDGDVTSGMVKDPA
DVLDRQKCLDALAALRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSPFPGWAMELLV
EKAISSASAPLSPGDALRRVFECISSGILLPGGPGLVDPCEKRPVDTLTTMGEQQREDIT
SSAQFALRLLAFRQIHKVLGMDPLPQINPRFNVRNSRKRRRDNSDGTDSFEGEGKKDKKD
YENF
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgattcctatatgtccagtagtgtccttcacctatgtgcccagccggctcggtgaagat
gccaaaatggctaccggcaattactttggatttacccatggtgctgccgcccagtacagt
cagcagccaggtgctggggtggcatacacgcaccccaccacggtggccagctacactgtc
catcaagcacctgtggcggcacacaccgtggcggcggcctatgctcccactgcagccaca
cttgcagtagctaggcccgcgcccgtcgcagtagcggccgctactgcctcggcctatggg
ggataccagccaacccacgctgcgactgactacggctaccctcagcgccaacaggaagtc
cctccacccccgccaccggtcacctcacaaaactaccaggacacctactcctatgtccgt
tccacagctcctgctgtagcctacgacagtaagcagtactaccaacaggccactgctaca
gcagcggtcgctgctgcacagccacaacccagcgtggcagattcctactaccagacagcc
cccaaaccaggatatagccagggggtaacatcttacacccagagccagcagagtcgacag
gtgaccgtgataaagccagctgctcccaatccagcctcatccaccttctccatctaccca
gtgacttccgctgtccagcctgtggccgctgccgcggtcccgtcttactcccaaagccca
acctacagcaccaatgccgtcacctactctggaacctcgtactccggctacgaggcagca
gtttattctgcagcttcaagctactaccaccagcagcagcagcagcagcagcagcaacaa
caacaacaacaacaaaagcaggcagtggcagctgtagcggcaacagcggcgtggacgggg
aacactttcaccaagaaacccccttttcagagcaagcagcttcggcccaagcagccgccc
aaacccccanngatccactactgtgacgtctgtaagatcagctgtgccggaccgcagact
tacaaggagcatcttgaaggccagaagcacaagaagaaggaagcggcactgaaggtttcc
caaagcagcagcagcaccagcagtggtagcggcggaggggcgctggcccgaaacgctcaa
aaccagctccgctgtgaactttgcgatgtttcctgtactggcgcagatgcctacgctgca
catatccgcggagccaaacaccagaaggttgtgaagcttcacaccaaactcggtaagccc
attccctctacggagcccagtatggtcactcagacatcgtcctccaccacggctgctccc
agcaagaccaccacagcgaccctgagcagctccggcaccagcggctctctgtgcatgtct
gccacctcctcctcctccgcctcgaacaccagttccagcgcttcatatctgaaacccgtc
aacatagtcaacagtggtatggcaggtgtcaagaacccattaaccaacagcctctctgct
gccaactcggtctcagtcgggaagaaagtcaacgcccccaagatcaattttgttggtgga
aataaattgcagaccacagcgaagatggacgaatccaaagtggaggcttctaagcctgca
acgccctcttcagccactcatgaccccaagactgacgtctccgattctctgtccacatcg
gccttggctgcactgcagagcgacgtccagcctgttggtcatgactacgtcgaggaggtc
cgaaatgacgaaggcaaggtcatccgcttccattgcaagctttgtgaatgtagcttcaac
gatccaaatgcaaaggaaatgcatctaaaaggacgaaggcatcgcctgcaatacaagaaa
aaggtgaacccagatctgcaagtggaggtcaagcccagtatccgagcccgaaaaattcag
gaagagaagatgaggaagcagatgcagaaagaggagtactggaggagaagggaggaggag
gagcgctggagaatggaaatgcggcgttacgaagaagacatgtactggagacgtatggag
gaggagcagcaccactgggacgaccggcgacgtatgccggatggagggtatccacagggg
cctcctggccctcctggtctactcggagtccggcccggcatgcctggcctgcagcctcag
ggtcctgtgcctccccgtcggcccgactcttcagacgaccgctacgtcatgaccaagcat
gcagccatctacccctcggaggatgagctccagtccatccagaagatcgtgtcgatcaca
gagcgcgccctcaaactggtgtcggacatcattacagaccaggacaaggccaaggatgga
gaagagaaagaggagaaggaacctgctaaagacagagccctgaagggagtgatgagggtc
ggtgtcctggccaaaggcttgctgcttcgcggggacaagaatgtcaacctggtcctgctc
tgctccgagaagcccaccaagagcctcatcacccgcattgtggagcacctgcccaaacaa
ctaacagtggtaacgcccgaaaaatacgaggtcagcggatccgcccaggaagcggcgatc
atcctgacatcctgcaccgatcccaagatgcgagtgacgatcactctgacttcgcccctc
atcagggaggaaggctgccgggacggagatgtaacctcgggtatggtgaaagacccagcg
gacgtcttggacaggcaaaaatgccttgacgctctggctgctctgcgccacgctaagtgg
ttccaggctagagccaacggccttcagtcctgcgtgatcatcatccggatcctgagagac
ctctgccagagagttcccacgtggtcgcccttcccgggatgggccatggagctgctagta
gagaaggccatcagcagcgcctccgcccccctgagcccgggtgatgccctgagacgggtc
tttgaatgtatctcttctgggattttactccctggtgggccaggattggtagatccttgt
gaaaagaggcccgtggataccctcacaaccatgggagagcaacagagagaggacatcacc
tccagtgcccagtttgctctgagactcctggcgttccgtcagatccacaaagttctgggc
atggaccccctgccgcagataaacccccgcttcaacgtccgcaacagccgcaagcgtcgc
cgcgacaacagcgacgggacggacagcttcgagggcgaaggcaagaaggacaagaaggat
tacgaaaatttctaa
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