Anoplopoma fimbria (sablefish): 129101174
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Entry
129101174 CDS
T09102
Symbol
ark2cb
Name
(RefSeq) E3 ubiquitin-protein ligase RNF165 isoform X1
KO
K17821
E3 ubiquitin-protein ligase RNF165 [EC:
2.3.2.27
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129101174 (ark2cb)
Enzymes [BR:
afb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129101174 (ark2cb)
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129101174 (ark2cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
U-box_ZFPL1
zf-ANAPC11
zf-RING_Vps41
zf-RING_16
Prok-RING_4
RINGv
zf-RING_10
zf-RING-like
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
129101174
NCBI-ProteinID:
XP_054466822
LinkDB
All DBs
Position
13:complement(8807778..8817122)
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AA seq
356 aa
AA seq
DB search
MVLVHVGYLVLPVFGSVRNRGSHFNRQQQQQQHSHATSCRHFQLGPQAPLPMDFPMPHPG
QPQSGINPHLAPPGHQHGPPLHPPLNPLPAPQFQDIPAPPFLPQALHQQYLLQQQILEAQ
HRHILPPSSRRTPERVPHQPHRLRPGYEFAPPLHVPPQPVVQQPRYLAEGTDWDLSVDAG
LPPHQYHIHPLPQHYQHYLTSPRMHHFPRNNASTQVVVHEIRNYPYPQLHLLALQSLNPS
RHASAVRESYEELLQLEDRLGSVNRGAVQTTIERFTFPHKYKKRIPQDLKMCLDDEELDT
DEKCTICLSMLEDGEDVRRLPCMHLFHQGCVDQWLATSRKCPICRVDIETQLTPDS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggtcttagtgcatgtcggatatctggttcttcctgtattcggctcagtaagaaacaga
ggatcccatttcaaccggcagcagcagcagcagcagcacagccatgctacctcttgccgg
cacttccagttaggtcctcaggccccgctgcccatggacttccccatgccccacccaggg
cagccgcagtcaggcattaacccccacctggcccctcccggccaccagcatggccctccg
ctccacccgcccctcaaccccctgccagctccccagttccaggacatccctgcccctccc
ttcctacctcaggcattacaccagcaatacctcctccagcagcagatcctcgaggcccag
caccgacacatcctgccaccctccagtagacgcaccccagagagagttcctcaccagccc
cacagactgcggcccggctatgagtttgcgccccctcttcatgtccctcctcagcctgtg
gtgcagcagccacgctacctggctgagggcacagactgggatctaagtgtggatgctggg
ttgcccccccaccagtatcacatccatccgctcccgcagcactatcaacactacttgacc
tctcctcggatgcaccacttccctagaaacaatgcctcaacacaagtggttgtccatgag
atcagaaactacccatatccccagctgcacttgctggctctgcagagtctcaacccctcc
cgccacgcgtctgccgttagagagagctacgaggaacttttgcagctggaggacaggctg
ggtagtgtaaaccgtggagcagtccaaaccaccatagagagattcaccttcccccataag
tacaagaagagaataccccaggacctgaagatgtgtctggatgatgaggagctggacacg
gatgagaagtgcaccatctgtctgtcgatgctggaggatggagaggatgttaggagatta
ccctgcatgcacctcttccaccaggggtgtgtggaccagtggctggccaccagcaggaag
tgccccatctgtagagtggacattgagacccaactgactcccgacagttga
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