KEGG   Anoplopoma fimbria (sablefish): 129101223
Entry
129101223         CDS       T09102                                 
Symbol
gle1
Name
(RefSeq) mRNA export factor GLE1
  KO
K18723  nucleoporin GLE1
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03013  Nucleocytoplasmic transport
afb03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    129101223 (gle1)
   03015 mRNA surveillance pathway
    129101223 (gle1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:afb03019]
    129101223 (gle1)
Messenger RNA biogenesis [BR:afb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     129101223 (gle1)
SSDB
Motif
Pfam: GLE1
Other DBs
NCBI-GeneID: 129101223
NCBI-ProteinID: XP_054466906
LinkDB
Position
13:27006373..27017396
AA seq 719 aa
MPSENLRWETLQALKNSPKGNITYDPYWSERGEDILAGCKDPLSLSSHSGLILERLGPVP
LQKSCFLSSSSGGSSPGLSEENSASVSSSGSIPDLNARHSALSAAPSLNAEREQAVSDEV
KDEDPEEDVSNVPTPASLPSISLLSPKAMETAGRIIKFEEEQRGKAKMALKRRQEMHEKL
VAVVASSESEQLKRFEEFMELKQRQEFQSMRDMMDRETKESIGRQEKLKEEQRHRLKILN
LRLREAEQQRLREAELERQRQTDGRERLRNLNTIQEEILQLNQLMEPSTQSRTDLHPASL
SSYCTRGNQLCSQLSEVVRKTAEGEFPSVEDMTVAERALHEMRALIRLMQEEVAKAQDKK
KKDEEDEEQRRKQEELQAQQEAQKKAAESAKEKAKRKGLQNSAEDGTLKWYKELQESAAR
CAQSFEQLNAAKDAQTKKLKLELQKSASIPVSQISSNSGSQLREIFEKIDKLLSGRAVVS
GGRNVSTSQHPQGLDFVSFKLAEKFVKQGEEEVASHHEAAFPIAVVASGVWELHPQVGDL
ILAHLHKKCPYAVPHYPPMKDGTAVEDYQRILGYRVDDSGVEGQDSFLKRMSGMIRLYAA
VIQLRWPYGSKQGSPPHGLSNGWRWLAQMLNMEPLADITATLLFDFLEVCGNALMKQYQS
QFWKLILLLKEEYFPRIEAVTSSGQMGSVIRLKQFLDTSLQSRQIRPPKGQLNSMFWGS
NT seq 2160 nt   +upstreamnt  +downstreamnt
atgccctccgagaacctacgatgggaaacgttgcaggctctgaagaactctccgaagggg
aacatcacgtacgacccgtactggtcggagcggggggaggatatcttggccggctgcaaa
gatcccctcagcctgtcctcgcactctgggctcatactggagcgtctgggccccgtgccc
ctgcagaagtcctgcttcctgagctccagctccggaggatccagccccggactctctgag
gagaactcggcctcggtgtcctcctcgggatccatccccgacctcaacgccaggcacagc
gcgctctctgcagccccgtctttgaacgctgagcgtgagcaggctgtcagtgatgaggtg
aaggatgaagatccagaggaagatgtcagcaacgttcccactccggcatcacttccttcc
atttcccttctgtcgcccaaagccatggagacggcggggcgcattatcaagtttgaggag
gagcaacgaggaaaggccaagatggcgctcaaacggcggcaggagatgcacgagaagctg
gtggccgtggtggcgagctccgagtcggagcagctgaaacgcttcgaggagttcatggag
ctgaagcagaggcaggagttccagagcatgagggacatgatggacagagaaactaaagag
agcatcgggcgtcaagagaagctgaaggaggagcagcggcacagattgaagatcctcaac
ctgcgtctgcgggaggcggagcagcagcgtctgcgggaggcggagctcgagcgtcagcgg
cagacggacggccgcgagcgtctgcgaaacctcaacaccatccaggaggagatcctgcag
ctcaaccagctgatggagccgtccacccagagcaggacggacctccacccggccagcctc
agctcctactgcacccgcgggaaccagctgtgctcccagctgtcggaggtggtgcggaag
acggcggagggagagtttcccagcgtggaggacatgacggtggccgagcgagccctccac
gagatgagggcgctgatccggctgatgcaggaggaggtcgccaaggcccaggataagaag
aagaaggacgaggaggacgaggagcagcgcaggaagcaggaggagctgcaggcgcagcag
gaggcgcagaagaaggcggcggagtcggccaaagagaaggcgaagaggaaaggtctgcag
aacagcgctgaagacggcactctgaagtggtacaaggagctgcaggagtcggctgctcgc
tgtgctcagtcctttgaacaactcaacgccgccaaagacgcccagacgaagaagctgaag
ctggagctgcagaaatccgccagcatccccgtcagtcagatctccagcaactccgggtcg
cagctccgagaaatcttcgagaagatcgacaagctgctgtcgggccgggccgtggtgtcg
ggggggaggaacgtctccacctcccagcatcctcaggggctggactttgtcagcttcaag
ctggctgagaagtttgtgaaacaaggagaggaggaggtggcgtctcaccacgaagccgcc
ttccccatcgccgtggtggcgtccggcgtctgggagcttcaccctcaggtgggcgacctc
atcctcgctcacctgcacaagaaatgtccgtacgccgtcccgcactacccgcccatgaag
gacggcacggcggtggaggactaccagaggattcttgggtaccgcgtggacgactccggg
gtcgaaggtcaggacagtttcctgaagaggatgtcggggatgatccggctctacgccgcc
gtcatccagctgaggtggccctacggctccaagcaggggtctcctcctcacggtctgagc
aacggctggcgttggttggctcagatgctgaacatggagcctctggccgacatcacggcc
acgctgctgttcgacttcctagaggtttgtggaaacgctttgatgaaacagtatcagagt
cagttctggaaactcatcctgctactaaaggaggaatacttcccgaggattgaagcggtg
accagcagtggacagatgggctcagtcatcagactcaaacagtttctagacacatcgctg
cagagccgacagatccgtcctcccaaaggacaactgaactccatgttctggggctcctga

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