Anoplopoma fimbria (sablefish): 129101223
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Entry
129101223 CDS
T09102
Symbol
gle1
Name
(RefSeq) mRNA export factor GLE1
KO
K18723
nucleoporin GLE1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03013
Nucleocytoplasmic transport
afb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129101223 (gle1)
03015 mRNA surveillance pathway
129101223 (gle1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129101223 (gle1)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129101223 (gle1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
129101223
NCBI-ProteinID:
XP_054466906
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All DBs
Position
13:27006373..27017396
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AA seq
719 aa
AA seq
DB search
MPSENLRWETLQALKNSPKGNITYDPYWSERGEDILAGCKDPLSLSSHSGLILERLGPVP
LQKSCFLSSSSGGSSPGLSEENSASVSSSGSIPDLNARHSALSAAPSLNAEREQAVSDEV
KDEDPEEDVSNVPTPASLPSISLLSPKAMETAGRIIKFEEEQRGKAKMALKRRQEMHEKL
VAVVASSESEQLKRFEEFMELKQRQEFQSMRDMMDRETKESIGRQEKLKEEQRHRLKILN
LRLREAEQQRLREAELERQRQTDGRERLRNLNTIQEEILQLNQLMEPSTQSRTDLHPASL
SSYCTRGNQLCSQLSEVVRKTAEGEFPSVEDMTVAERALHEMRALIRLMQEEVAKAQDKK
KKDEEDEEQRRKQEELQAQQEAQKKAAESAKEKAKRKGLQNSAEDGTLKWYKELQESAAR
CAQSFEQLNAAKDAQTKKLKLELQKSASIPVSQISSNSGSQLREIFEKIDKLLSGRAVVS
GGRNVSTSQHPQGLDFVSFKLAEKFVKQGEEEVASHHEAAFPIAVVASGVWELHPQVGDL
ILAHLHKKCPYAVPHYPPMKDGTAVEDYQRILGYRVDDSGVEGQDSFLKRMSGMIRLYAA
VIQLRWPYGSKQGSPPHGLSNGWRWLAQMLNMEPLADITATLLFDFLEVCGNALMKQYQS
QFWKLILLLKEEYFPRIEAVTSSGQMGSVIRLKQFLDTSLQSRQIRPPKGQLNSMFWGS
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgccctccgagaacctacgatgggaaacgttgcaggctctgaagaactctccgaagggg
aacatcacgtacgacccgtactggtcggagcggggggaggatatcttggccggctgcaaa
gatcccctcagcctgtcctcgcactctgggctcatactggagcgtctgggccccgtgccc
ctgcagaagtcctgcttcctgagctccagctccggaggatccagccccggactctctgag
gagaactcggcctcggtgtcctcctcgggatccatccccgacctcaacgccaggcacagc
gcgctctctgcagccccgtctttgaacgctgagcgtgagcaggctgtcagtgatgaggtg
aaggatgaagatccagaggaagatgtcagcaacgttcccactccggcatcacttccttcc
atttcccttctgtcgcccaaagccatggagacggcggggcgcattatcaagtttgaggag
gagcaacgaggaaaggccaagatggcgctcaaacggcggcaggagatgcacgagaagctg
gtggccgtggtggcgagctccgagtcggagcagctgaaacgcttcgaggagttcatggag
ctgaagcagaggcaggagttccagagcatgagggacatgatggacagagaaactaaagag
agcatcgggcgtcaagagaagctgaaggaggagcagcggcacagattgaagatcctcaac
ctgcgtctgcgggaggcggagcagcagcgtctgcgggaggcggagctcgagcgtcagcgg
cagacggacggccgcgagcgtctgcgaaacctcaacaccatccaggaggagatcctgcag
ctcaaccagctgatggagccgtccacccagagcaggacggacctccacccggccagcctc
agctcctactgcacccgcgggaaccagctgtgctcccagctgtcggaggtggtgcggaag
acggcggagggagagtttcccagcgtggaggacatgacggtggccgagcgagccctccac
gagatgagggcgctgatccggctgatgcaggaggaggtcgccaaggcccaggataagaag
aagaaggacgaggaggacgaggagcagcgcaggaagcaggaggagctgcaggcgcagcag
gaggcgcagaagaaggcggcggagtcggccaaagagaaggcgaagaggaaaggtctgcag
aacagcgctgaagacggcactctgaagtggtacaaggagctgcaggagtcggctgctcgc
tgtgctcagtcctttgaacaactcaacgccgccaaagacgcccagacgaagaagctgaag
ctggagctgcagaaatccgccagcatccccgtcagtcagatctccagcaactccgggtcg
cagctccgagaaatcttcgagaagatcgacaagctgctgtcgggccgggccgtggtgtcg
ggggggaggaacgtctccacctcccagcatcctcaggggctggactttgtcagcttcaag
ctggctgagaagtttgtgaaacaaggagaggaggaggtggcgtctcaccacgaagccgcc
ttccccatcgccgtggtggcgtccggcgtctgggagcttcaccctcaggtgggcgacctc
atcctcgctcacctgcacaagaaatgtccgtacgccgtcccgcactacccgcccatgaag
gacggcacggcggtggaggactaccagaggattcttgggtaccgcgtggacgactccggg
gtcgaaggtcaggacagtttcctgaagaggatgtcggggatgatccggctctacgccgcc
gtcatccagctgaggtggccctacggctccaagcaggggtctcctcctcacggtctgagc
aacggctggcgttggttggctcagatgctgaacatggagcctctggccgacatcacggcc
acgctgctgttcgacttcctagaggtttgtggaaacgctttgatgaaacagtatcagagt
cagttctggaaactcatcctgctactaaaggaggaatacttcccgaggattgaagcggtg
accagcagtggacagatgggctcagtcatcagactcaaacagtttctagacacatcgctg
cagagccgacagatccgtcctcccaaaggacaactgaactccatgttctggggctcctga
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