Anoplopoma fimbria (sablefish): 129101236
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Entry
129101236 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase KCMF1-like
KO
K22376
E3 ubiquitin-protein ligase KCMF1 [EC:
2.3.2.27
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129101236
Enzymes [BR:
afb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129101236
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129101236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
ZZ
zf-C2H2
TFIIA
Motif
Other DBs
NCBI-GeneID:
129101236
NCBI-ProteinID:
XP_054466935
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Position
13:10851720..10864089
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AA seq
417 aa
AA seq
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MSRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTEHPMQCILTRVD
FDLYYGGEAFSVEQPQAFTCPYCGRMGYTEISLQEHVAAEHTETSTEVICPICAALPGGD
PNHVTDDFAAHLTLEHRAPRDLDESSGVRHVRRMFHPGRGLGGPRARRSNMHFTSSTTGG
LSTSQSSSQSSNYSREAMDPIAELLSQLSGVRRSAGGQLSSGPSASQLQQLQMQLQLERQ
QAQAARQQLETARNATRAAAEPMQSSIQIQPARTQTPAPTTTQTPVLTRVHLSPTXQQTA
HSSQFLLSRLSEPRLSEAERQACEAQWADRSLFVTELLLSTLLPDDDASASSSEDEDDCH
GPLRNFADFQSMGCVEVMTLDVALENLNLKEMNPATKTTKTTTKTAPTKKEPPAPPL
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcatgaaggcgtgagctgcgatgcatgtttaaaaggcaacttcaggggacga
cgatacaaatgtttaatctgctacgactacgacctgtgcgcatcttgctacgagagcggc
gcaaccactaccagacacaccacagagcatcccatgcagtgtatattaacccgagttgac
tttgacctgtactacggtggagaggcgttctcagtggagcagccccaggccttcacatgt
ccctactgtggcaggatgggctacacagagatctccctgcaggagcacgtggctgcagaa
cacacagagacctccacagaagtgatctgccccatatgtgcagcgctgccaggcggcgac
ccaaatcacgtgactgatgactttgctgctcatctcacacttgaacacagagcacccaga
gacttggatgagtccagtggggtgcggcatgtgaggaggatgtttcaccctggccgtggg
ctggggggtccacgagcccgcaggtccaacatgcacttcaccagcagcaccacagggggg
ctctccaccagccagagttcctcacagagctccaactacagcagagaggccatggatccc
atagcagagcttctgtcccagttgtcaggggtgcggcgttcggcgggtggacagctcagc
tcgggcccatcggcctcccagctccaacagcttcagatgcaactccagttggagcgccag
caggcccaggcggcgcggcagcagttggagacggcccgaaacgccacccgggcggcggcc
gagccaatgcaatcctcaatacaaattcagccggcgcgaacccaaactccagcgccaacc
acaactcaaaccccagtcctaacccgggtccacctgagtccaacancacagcaaacggca
catagctcccagtttctactcagcaggctgagcgaaccgcggctgtcggaggctgagcgg
caggcgtgcgaggcccagtgggccgacaggagcctgtttgtgacggagctgctgctgtcc
acgctgctgcccgacgacgacgcctcggcctcctcttcggaagacgaggacgactgtcac
ggcccgttgcggaacttcgccgacttccaatccatgggctgtgttgaggtcatgaccttg
gacgtggcactggagaacctcaacctcaaggagatgaacccggctaccaagacgacgaaa
acaacgactaaaacggcaccaacgaagaaagagcctcctgcgccgccactttga
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