KEGG   Anoplopoma fimbria (sablefish): 129101254
Entry
129101254         CDS       T09102                                 
Symbol
polb
Name
(RefSeq) DNA polymerase beta
  KO
K02330  DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    129101254 (polb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:afb03400]
    129101254 (polb)
Enzymes [BR:afb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     129101254 (polb)
DNA repair and recombination proteins [BR:afb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     129101254 (polb)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     129101254 (polb)
SSDB
Motif
Pfam: DNA_pol_B_palm HHH_8 DNA_pol_B_thumb DNA_pol_lambd_f HHH_5 NTP_transf_2 HHH_2 Cdd1 DUF4806
Other DBs
NCBI-GeneID: 129101254
NCBI-ProteinID: XP_054466963
LinkDB
Position
13:complement(10153890..10159866)
AA seq 336 aa
MSKRKAPQESPNEGITDFLVELANYEKNVNRAIHKYNAYRKAASTISKYPNKIKNGEEAK
KLEGVGAKIAEKIDEFLQTGKLRKLEKIRNDDTSSSINFLTRVTGIGPAAARKFFEEGVK
TLEDLKKIEHKLNHHQQIGLKYFEEFEKRIPRAEMEQMETLILGELKEIGTEYIGTICGS
YRRGAASSGDIDILLTHPDYTSDTQKQPKLLHAVVDHLESIGFVTETMSKGDTKFMGVCQ
LQRTDEDEEEYLHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTIR
PLGVTGVAGEPLMVDSERDIFEYIHYKYREPKERSQ
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgagcaagaggaaagcgccacaggaatccccaaatgagggaataacagactttcttgtc
gagctggccaattacgagaaaaacgtcaacagggcgatacacaagtacaacgcttacagg
aaagcagcatcgaccatctccaagtaccctaacaaaatcaaaaatggcgaagaggcaaag
aaactggaaggtgttggagctaaaatagcagaaaagattgatgagttcctacaaactggc
aagctacggaaactggaaaagatccgtaacgatgacacaagctcttccatcaatttcctc
accagagtcaccggaattggccctgctgccgccaggaagttttttgaagaaggggtgaag
acattagaagatttgaaaaagattgagcacaagctgaatcatcatcaacagattggactc
aagtactttgaggaatttgagaagaggattccacgtgctgaaatggaacagatggagact
cttattcttggagagttgaaggagatcggcacagaatatattgggacaatctgtggaagc
tacaggagaggtgcagcatcgagtggtgatattgatattttgctgacccacccagactac
acctctgatactcagaagcagcccaagctccttcatgcagtggttgaccatttggagtcc
attgggtttgtgaccgagaccatgtccaaaggagacactaagttcatgggagtctgccag
ctgcagcggactgatgaagatgaggaagaataccttcacaggcgtattgatattaggtta
attcccaaggaccagtactactgtggagttctgtatttcactggaagtgacatcttcaat
aaaaacatgagaactcatgcgctggagaagggcttcactcttaatgagtacaccatacgg
ccactcggggtcactggtgtggcaggggagcctctgatggtggatagtgagagagacatc
tttgaatacatccactacaaatacagagagccaaaggagcgcagccagtga

DBGET integrated database retrieval system