Anoplopoma fimbria (sablefish): 129101270
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Entry
129101270 CDS
T09102
Symbol
cacna1ba
Name
(RefSeq) calcium channel, voltage-dependent, N type, alpha 1B subunit, a
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04010
MAPK signaling pathway
afb04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129101270 (cacna1ba)
04020 Calcium signaling pathway
129101270 (cacna1ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129101270 (cacna1ba)
Ion channels [BR:
afb04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
129101270 (cacna1ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
129101270
NCBI-ProteinID:
XP_054466984
LinkDB
All DBs
Position
13:complement(13397429..13523531)
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AA seq
2382 aa
AA seq
DB search
MARFEDGLSSRYGGSCPAGPTRGASRPPGQSMAQRARTMAIYNPIPVKQNCLTVNRSLFT
FSEDNIIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPASDKTPMSERLDDTEPYF
IGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGADFDLTTLRAVRVL
RPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLDFYMGKFHRTCFRID
TDVKAADFPCGLEAPARTCANGTTCKEYWTGPNYGITNFDNILFAVLTVFQCITMEGWVD
ILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEKRQEFLKLRRQ
QQIERELTGYLEWICKAEEVMLAEEDKNAEEKSLDGAWYKKKHNNSVLKRAKKSKNDLIN
AEEAEDHFTDISSVGSPFTRTSLKSKNESSSYFRRKEKRMRFTIRRLVKSQSFYWTVLCL
VGLNTLCVAIVHYDQPDWLTFALYLAEFVFLGLFLAEMSMKMYGLGPQNYFHSSFNCFDF
GVIIGSIFEVVWAVIKPGASFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIIS
LLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDTFPAAILTVFQILTGEDWNAVMYH
GIESQGGVHRGMFSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEQEEAINK
KIALQKAKEVKEVSPMSATNISITAFLTRSRGNAHSSSSSICSVNSLSYVCTPVHHYLSK
EQQKSLKTMSVWEQRANKLRWNNQASCKALHSEMELEDRLRLSPALHIRSDMKTHLDRPL
VVEPREGPLLAGHQHHHHKPCMPEAAVTATDPPPPVPHQPRRHHRHRDRDRTKARQDTND
NSGASKDGGHHVHHSHSKDHEGIRGQEGKSERSRSREGGRRHNHQSSVDDSGGGGVKSER
EHRHHHSHRQSRGGNGTVNSGGRAERRSRHKDGRSSNRDGDGHSRGDSGATGEKRRHRGH
GSRGQSVEGEESNDREKTNNHRDRFVDSEGESLAFSPQQGSGGASWPPDQPEDSDNQRNV
KRTGQSSVQIPPVTITSPPGDTTFIQMSSLACETMPMNESGPKPILPYSSMFIFGQSNPV
RRLCHYIVTLRYFEMSILVVIAMSSIALAAEDPVWTNAPRNNVLKYLDYAFTGVFTFEMV
IKMVDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSSFMGRSQQGVTRGTKGKDISTI
KSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYILFMFIFAVIAVQLFKGK
FFYCTDESKGLEKDCKGQFLDYDQDEVAAMPREWKKYEFHYDNVLWAFLTLFTVSTGEGW
PTVLKHSVDATFEDTGPSPGYRIEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKAL
SECSLEKNERACIDFAINARPLTRYMPQNTQSFQYRMWKFVVSPPFEYSIMIMIALNTVV
LMMKFHGAPDFYEAMLKNLNIVFTTLFSLECVLKIIAFGPLNYLKDAWNVFDFVTVLGSI
TDILVTEINTTDRLLNLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIA
MLFFIYAIIGMQVFGNIDMNEDTAINHHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSH
RACDERSGNHGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHH
LDEFIRVWAEYDPAACGRIKYLDMYQMLLHMSPPLGLGKKCPPRVAYKRLVKMNMPIADD
NSVHFTSTLMALIRTALEIKLASGMVAQRLSDAVLKKDLSTVWPSLSQKTMDLLVTPHKH
NELTVGKVYAALMIFDYYKQNRARRQQQQQGVSGSKCKVGALFKPLLPLTHMQEKDLHRV
EPPSMHQPHAKSQPQTRPSSNSLNNGGTLPGHDHTIKESSSWVMEKPKEAPRAKTKRTMS
RGPSEDKPDIAVIQESVEMRKMETSASSTLPVPESGLENQGRAASMPRLNAELQRSHSGH
SPGIHLATVPDVSPMKRSASTVAPQRPQEVNLRDYTLEKPSQDRPHHHHHHHHHRCHHRR
DRDRDKDREKRQRSLDTPLGGQPPSSAGAPGEPESDPAASRDRGHDRGRSHDRKHHSSAD
KQRYYSCDRYCSREHCHTKSAAASCAASPSEGQEPSNKQGSGWVKGSPMALSSSSSTPSR
GRRQLPQTPLTPRPGVAYKTANSSPVHFESSQASLSPGRLSRGLSDHGALQHSTHHFPCP
VTRISSEPFLGRGHGEALGSLYSSLRDQLDVFQDAVSLTPSPRAERSSRTALPRMMGALL
PAPQQNLGVPNGYHFSFRGSTSPGSGVRAHRYYQEAEEDEWC
NT seq
7149 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcttcgaagacgggctgtctagccgctatggaggcagctgtcccgcgggcccg
accagaggggccagccggccgccggggcagtcgatggcccagagagccaggaccatggcc
atttacaaccccatcccggtcaaacagaactgcctcaccgttaaccgctccctgttcacc
ttcagtgaggataatatcatacggaaatatgccaaaaggatcacagaatggcctccattt
gagtacatgatcctggccaccatcatagccaactgcattgtgctggccctggagcagcac
ctaccggcctcagacaaaacaccgatgtcagagcgtttggacgacacggagccctacttt
attggaatattttgtttcgaggctggcatcaagatcatcgccctgggcttcgcctttcac
aaaggctcctacctgcgtaatggctggaatgtaatggactttgtggtggtcctaacaggg
atcctggccactgtgggggccgactttgatctgacaacactgagggcggtcagagtgctg
cggccgctcaaattggtctccggcattccaagtcttcaggtggtattgaagtccattatg
aaagccatggtgcctctgctgcagatcggcttgctgctcttcttcgccatcctcatgttc
gccatcatcggcctcgacttctacatgggcaagttccaccgcacctgcttcagaatcgac
acagacgtgaaggcagcggatttcccctgtggcctggaggctccagcgaggacctgcgcc
aacggcaccacctgcaaggagtactggaccggacccaactatggcatcaccaactttgac
aacatcctctttgctgtgctcaccgtcttccagtgcatcacaatggagggatgggtggac
attctctacaacgccaacgatgcttcagggaacacgtggaactggctctacttcatcccc
ctcatcatcatcggctccttcttcatgctcaacctggtgttaggtgtgctgtcaggggag
tttgccaaggagagagagcgggtggagaagaggcaggaattcctgaagctccgcagacaa
cagcagatagaaagagagttaactgggtacctggagtggatctgtaaagcagaggaggta
atgctggctgaggaagacaagaacgcagaggagaaatctctggatggagcgtggtacaaa
aagaaacacaacaactctgtgctgaaaagagccaagaagagtaagaatgacctcatcaat
gcagaggaagctgaggaccacttcactgacatctcatctgttgggtccccgttcacccgg
accagcttgaagagcaagaacgagagctcgtcttacttcaggaggaaagagaagaggatg
cgcttcaccatccgccgtctggtcaagtcccagagcttctactggactgtgctgtgtctg
gttggcctcaacacgttgtgtgtagccatagtacactatgaccagcctgattggctcacc
tttgccctctacctagcagagtttgtcttcctgggcctgttcctggctgagatgtccatg
aaaatgtacggcctcgggccccagaactacttccactcatcattcaactgctttgacttc
ggggtgatcattggcagtatttttgaggtggtctgggccgtcatcaaacccggggcctca
tttgggatcagtgtcctgcgggctctgaggctgctcaggatcttcaaagtcacaaagtac
tggaactccttgaggaacctggtcgtatcccttctcaactccatgaagtctatcatcagc
ctgctgttcctcctcttcctcttcatcgtggttttcgctctgctgggcatgcagctgttt
gggggccaatttaattttgaagacgaaacgcccacaaccaactttgacacattcccagca
gcgattctcaccgtgttccagatcctaaccggggaggactggaatgcagtcatgtaccac
ggcatcgagtcacaggggggcgtccacaggggaatgttctcctccatttatttcatcgtc
ctcactctctttggaaactacacgcttctcaacgtattcttggccatcgctgtcgataac
ctcgcaaatgcccaggagctcaccaaggatgaagaggagcaagaggaggccatcaataag
aagattgcgctccagaaggccaaggaggtaaaggaggtcagccccatgtcagccactaac
atttccatcacagcttttctaacacgcagtcgaggtaacgcgcactctagcagctcatcc
atctgcagcgttaactcactgagttatgtctgcaccccagtccatcactacctgagtaag
gagcagcagaagtcgttgaagaccatgtcagtgtgggagcagagggccaacaagctgagg
tggaacaaccaggcaagctgcaaggccctccacagtgagatggagctggaggaccgtctc
cgcctgtccccggcgctccacatccggtcagacatgaaaacccaccttgaccggccgctg
gttgttgagcctcgcgaagggcctttgcttgctggccaccagcaccaccatcacaagccc
tgcatgccagaggcagcagtgactgccaccgaccctcctcctcctgtgcctcaccagcct
cgccgccaccaccgccacagagacagagaccgaacgaaggcgagacaggatacgaatgat
aacagtggcgccagtaaggacgggggccatcatgtccatcacagccactccaaagaccac
gaaggcatccggggccaggaggggaaaagcgagaggtcccgcagccgagagggaggcagg
agacataaccatcagagctcagtggatgacagcggagggggaggagtcaagagcgagaga
gagcatcggcatcatcattcacaccggcagtccagagggggcaacgggacggtaaacagc
ggaggcagggcagagcgaagatcccgccacaaagatggacgatcgtctaacagggatggg
gatggacattccagaggagacagtggagccactggagagaagaggagacatcggggtcat
ggatccaggggccaatcagttgaaggagaggagtcaaacgacagagagaagacaaacaat
cacagggacaggtttgttgactcagagggggagtccctcgccttctccccccagcagggc
tctgggggggccagctggcctcctgatcaaccagaagactcagacaaccagaggaacgtc
aaaagaactggccaatcctccgtccaaattcctcctgtgacgatcacctccccacctgga
gacaccaccttcatccaaatgagcagtcttgcctgtgagaccatgcccatgaatgagagt
ggacccaaacccatcctgccttacagttctatgttcatctttggacaatccaatccggtg
aggcgcttatgtcactacattgtgactctgcggtattttgagatgtccatcctggtggtc
attgctatgagcagtattgccttggctgcagaggaccctgtgtggacgaacgcccctcgc
aacaatgtactcaaatatctggactacgccttcactggtgttttcacatttgaaatggtg
atcaagatggtggaccttggcctgttgcttcatcctggagcctacttcagagacctgtgg
aacattctggacttcatagtggtcagtggggcgctggtggcttttgcattttcgagcttc
atgggtagatcgcaacaaggtgtgaccagggggaccaaaggcaaagacatcagcacaatc
aagtcactgagggttctcagagtgctcaggcctctcaagaccatcaaacgcctgccaaaa
ctcaaggcggtgttcgactgtgtggtcaattctttgaagaatgtgctgaacatcctcatt
gtttacatcctcttcatgttcatctttgctgtcatcgcggtccagctcttcaagggaaaa
ttcttctactgcacagacgagtctaagggcctagagaaggactgcaaagggcagttccta
gactacgaccaagacgaggtggccgccatgcccagagagtggaagaaatatgagttccat
tatgacaatgtgctgtgggccttcctgaccctcttcacggtctccaccggggagggctgg
ccaactgtcttgaagcactctgtggatgctacctttgaagacacgggtcccagtccaggc
tacaggatagaaatgtccatcttctatgtggtctacttcgtggtcttccctttctttttt
gttaacatcttcgtcgctctcatcatcatcaccttccaggagcagggagacaaggccttg
tctgagtgcagcttggaaaagaatgagagggcttgtattgactttgccataaacgccaga
cctctgacccgctacatgccccagaacacgcagtccttccagtacaggatgtggaagttt
gtggtctcacctccattcgagtactccatcatgatcatgatcgctctcaatactgtagta
ctcatgatgaagttccatggagctccagacttctatgaagccatgcttaagaacctgaac
atagtgttcaccactctcttctctctggagtgtgtcctcaagatcattgcttttggtccg
ttgaactacttaaaggatgcctggaacgtatttgactttgtcacagtgctgggcagcatc
accgacatcctggtgactgaaatcaatactacggacaggctgctgaacctgagcttcctg
aggctgttcagagccgctcggctcatcaagctgctgagacagggctacaccatccgcatc
ctgctgtggaccttcgtccagtccttcaaggccctgccttatgtttgccttctgattgct
atgctgttcttcatctatgccatcattgggatgcaggtgtttggcaacatagatatgaat
gaggacacagctatcaatcaccacaacaacttccgtacttttctccaagctctcatgctg
ctgttcaggagtgcgactggcgaggcctggcatgagatcatgttatcctgtttgagtcac
cgagcctgtgacgagcgctcagggaaccatgggaaagagtgtggcagtgactttgcctac
ttctactttgtgtccttcatcttcctctgctccttcctgatgctgaacctgtttgtggcc
gtcataatggataactttgagtacttaaccagagactcctccatcctggggcctcatcac
ctggatgagttcatccgggtttgggccgagtacgacccggctgcatgtggccgtatcaag
tacctcgatatgtatcagatgctgctccacatgtccccacccttaggtttgggaaagaaa
tgtccaccaagagtcgcctacaagcgcctcgtcaaaatgaacatgcccatcgctgatgac
aacagcgtccattttacctccaccctgatggccctgattcgcactgccctggagatcaaa
ttggcctcaggcatggtagcccagcgcttatctgacgctgtgttaaagaaggatttgtct
acagtgtggcccagtctctctcagaagaccatggatctgttggtgacaccacataaacac
aatgaactgaccgtagggaaggtttatgcggccctgatgatcttcgactactataagcag
aatcgagcacggaggcagcagcagcaacagggcgtgtcaggctccaagtgcaaggtcggg
gctctgtttaagccattgctgcctctgactcacatgcaggagaaagatctgcacagagtg
gagcctcccagcatgcatcagccccatgccaagtcccagccacagaccagacctagctcc
aactccctcaacaatggaggcacgctgccaggtcatgaccacaccatcaaggaatcatcc
tcctgggtgatggagaaacccaaggaagcgccccgagctaagacaaagagaaccatgtcc
agaggtccatcagaggacaaaccggacattgccgtcatccaggaatcggtggagatgagg
aagatggagaccagtgccagcagcactttaccagtccctgagtcaggtctggagaaccag
ggcagagcagcttctatgcctcgactcaatgctgagctgcagcggagccattcaggccac
tctccagggatccatctggctactgttcctgatgtcagtccaatgaagcgctctgcctcc
accgtggccccacagcgaccccaggaggtcaacctgagggactacaccctggagaaaccc
agccaggaccggccccaccaccatcaccaccaccaccaccaccgctgccaccatcgccga
gacagggacagagataaagacagggagaagaggcagaggtctttggatacacctctgggt
ggacagccacctagctctgctggtgcaccaggagagcctgagtctgacccggctgcctcc
agagaccgaggccatgaccgcggacgctcccacgacaggaaacaccactcctcagcggat
aagcagcgctactactcctgcgaccgctactgcagccgggaacactgccacaccaaatct
gccgctgccagctgtgccgcctcccccagcgaggggcaggaacccagcaacaagcagggc
agtggttgggttaaaggcagcccaatggcactgagttcatcttctagcacgccaagccgc
ggacgtcggcagctcccccagacccccctcaccccgcggcctggggtggcctacaagact
gccaattcatcccctgtgcactttgagtccagccaggcctctctgagtcctggccggctg
agccgcggcctgtcagaccatggcgccctccagcacagcacccaccactttccctgcccc
gtcactcgtatcagctccgagcccttcctgggccggggccacggcgaggctctgggcagc
ctctacagcagcctccgggaccagctggacgtctttcaggatgcggtgtcactgacgccc
agcccccgtgccgaacgctcatctcggaccgcactgcctcgtatgatgggagccctgctt
cctgctccgcagcagaaccttggggtgcccaacgggtaccacttcagcttccggggaagc
accagcccaggctctggtgtcagggcacacaggtattaccaggaggcagaggaggacgaa
tggtgctag
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