Anoplopoma fimbria (sablefish): 129101315
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Entry
129101315 CDS
T09102
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
129101315 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
afb01002
]
129101315 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129101315 (usp30)
04121 Ubiquitin system [BR:
afb04121
]
129101315 (usp30)
Enzymes [BR:
afb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129101315 (usp30)
Peptidases and inhibitors [BR:
afb01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129101315 (usp30)
Membrane trafficking [BR:
afb04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
129101315 (usp30)
Ubiquitin system [BR:
afb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129101315 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
129101315
NCBI-ProteinID:
XP_054467059
LinkDB
All DBs
Position
13:complement(3898329..3904338)
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AA seq
503 aa
AA seq
DB search
MLWCRPESSDKLVGEFLGTGPIVRNKMMKNWGVIGGIAAAIAAGVYVLWGPITERKKKKR
GMVPGLLNIGNTCFLNSLLQGLAACPSFIRWLEMFSGSSMIQSCKDNQLSTTLLQLLNAL
SSDQPGEEDVLDAGCLLDVLRLYRWHISSFEEQDAHELFHVLTSSLEEERNHQPKVAHLF
DMQSLESIPDQDEKSMICRSRAPLHPIPSPWKSQHPFHGRLTSNMSCKRCEQQSPVRYDS
FESLSLSIPLPQWGRPISLDQCLQHFISSETIKEVECQNCTKLQQGNTVNGQVLESQRTT
FVKQLKLGKLPQCLCIHLQRLTWSSEGTPIKRQEHVQFTEHLSMDRYKHNAATHRSQRIR
CVQNPIKAENSDSMEKPSANGTETEQRHNNNRPFSNGTCSSVFLQSPGVNPQLGLTYDFR
PTEYLFQLNAVLVHHGDMHSGHFVTYRRSPSSPRTSSPISSQWLWVSDDSVRKASQHEVL
SSNAYMLFYERVRRPNPALHSEE
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgttgtggtgcagaccagaaagctctgataagcttgtcggggagttccttggcactgga
cccatagtcagaaacaagatgatgaaaaactggggagtcattggtgggatagctgccgcg
attgcagctggagtatacgtcttgtggggcccaattacagagagaaagaagaaaaagaga
ggtatggttcctggtctgttgaatataggcaacacctgcttcctgaactctttgcttcag
ggtttggcagcatgtccgtccttcatccggtggctggagatgttttcaggttcctctatg
atccagtcatgcaaggacaaccagctgtccacgacactgcttcagcttctcaatgctcta
tccagtgatcagccaggggaggaagatgtactcgatgccgggtgcctcctggatgttctc
cgactctaccggtggcacattagttcatttgaagagcaggatgcgcatgaactctttcat
gtcctcacatcttctctggaggaggagcggaatcatcaacccaaagtcgctcacttgttt
gacatgcagtccctcgagagcatccctgatcaagatgagaaaagcatgatctgcagaagt
cgtgcacctcttcatcctataccaagtccttggaagtctcagcatccttttcatggtcgt
ttaacaagcaatatgtcatgcaagcgctgcgaacaacaaagtccggtgcggtatgactca
tttgagagcctctccctgtccatccctttacctcagtggggtagacctatttcgctggat
cagtgtcttcaacattttatctcctctgaaaccatcaaagaagtggagtgtcaaaactgc
accaagcttcaacaagggaacacagttaacgggcaagttctggaaagccagaggacaaca
ttcgttaaacagctaaaactgggaaagctcccccagtgcctctgtatccatttacaaaga
ctgacgtggtccagtgaaggaacccccatcaaaagacaggagcatgtgcagttcacagag
catctatcgatggaccgctacaaacacaatgctgccacacacagaagtcagcgaatcaga
tgtgttcagaaccccataaaggctgaaaattcagattccatggaaaagccctctgctaat
ggcactgaaacagagcaacggcacaacaacaacagacctttttccaacggcacatgttcg
tctgtatttcttcagtctcctggagtgaacccacagctcggcctcacatatgacttcaga
cctacagagtatttgttccagctcaacgctgtgctggttcaccacggtgacatgcactca
ggacatttcgtcacgtaccgtcgcagcccttcctcaccgcgcacctcttcacccatcagc
tcccagtggctgtgggtgtcagacgactcggtacgaaaagccagccagcacgaggtgctg
tcgtccaacgcctacatgctcttctacgagagagtccgaagaccgaacccggctctgcac
tcagaggagtaa
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