Anoplopoma fimbria (sablefish): 129101335
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Entry
129101335 CDS
T09102
Name
(RefSeq) DNA repair protein XRCC4-like
KO
K10886
DNA-repair protein XRCC4
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
129101335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afb03400
]
129101335
DNA repair and recombination proteins [BR:
afb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
129101335
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
XLF
DUF7783
Motif
Other DBs
NCBI-GeneID:
129101335
NCBI-ProteinID:
XP_054467086
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All DBs
Position
13:complement(2624118..2649389)
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AA seq
320 aa
AA seq
DB search
MESSSDLSVIQTCLRLDVAVVSPYCTVMSGTVRQITVATDPGSPYFLRVDWAFDLVSGVK
LALTDGSSAWIGEVSEDDVTREANNLGATRERYVEDLLQALTGGEGGRKGGDKEVYSFHV
TPDHCHLSYQKICNDISLHLGSVELKPAPDPLELNREMIGQSLKRSTDLESKNCHLLKEN
RRLKQEHHRILRELEQQVEDKEMLEGELYSHFVTVLNEKKAKIRGLQDAVRQLQQTEGQQ
RDEEGRQSDDDTTQGEDNSQDKREETVPSIHPPQQPTILLRGDSLVCHGISVDRTFSDEE
DEQPRRKPSLLHSPEPSDQE
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggagagcagtagtgatttgagtgtcatacagacatgccttcgtttggacgtcgcagta
gttagcccatactgtaccgtcatgagtggtacagtccgacagattactgtagctactgat
ccaggctccccttacttcctgcgagtggactgggctttcgacttggtgtctggggtcaaa
ttagctctcactgatggcagctcggcgtggatcggagaggtttcagaagatgacgtgaca
agggaagccaacaatctgggagccacaagagaaagatatgttgaggatcttctccaagcg
ctaacaggaggtgaaggaggaaggaaaggaggcgacaaggaggtgtattctttccacgtc
actccagatcactgtcatctctcatatcagaagatctgtaatgacatctcgttgcacttg
ggttccgtggagctaaagccagctccagacccgctagagctgaaccgggagatgattggc
cagtccctaaagcgcagtacagatctggagtccaaaaattgccatctgttgaaggagaac
cgtaggctgaaacaggagcaccacagaattctcagagagctggagcagcaggttgaggat
aaggagatgttggagggcgagctgtactcccattttgtcacagtgctgaatgagaagaag
gccaagatcagaggcctgcaggatgctgtccgccagctccaacagactgaaggccagcag
agagatgaggaagggagacaaagtgacgatgacacaacccagggtgaagacaacagtcag
gacaaaagagaggagaccgttccgagcatccatccacctcagcagccaaccattctcctc
aggggtgatagtctggtgtgccatggcatctctgtggaccggaccttttcggatgaggaa
gatgaacagccgagacggaagcctagtttgcttcacagcccagaaccttctgatcaggaa
tag
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integrated database retrieval system
