Anoplopoma fimbria (sablefish): 129101413
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Entry
129101413 CDS
T09102
Name
(RefSeq) rho guanine nucleotide exchange factor 28-like
KO
K21072
A-kinase anchor protein 28
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129101413
Membrane trafficking [BR:
afb04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
129101413
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
C1_1
PH
C1_2
Ank_2
PHD_2
PHD
Motif
Other DBs
NCBI-GeneID:
129101413
NCBI-ProteinID:
XP_054467201
LinkDB
All DBs
Position
13:10433719..10474155
Genome browser
AA seq
1850 aa
AA seq
DB search
MSVLMSTFARSGWELEMKLSRRRVPLYGQAKVFALLEGLDSVPEYSEVYVVLEGSTLVHV
TKAQSDVMLCFIVPGHNLAEVVSVQAYLCSETTPVTWVGGASLEYVQDDAQDLAEHLVIH
GHCLSSADHKELSSLFNLGQESSRWAMDRRVALAMANLDIPRSWNVLGSHGGDEPTLRES
PLHLAVRWGLCRLAELLLCQPGGLMAVSLPNEEGVTPLQLARTAANTELLELLTHPPNPL
ATPPAGLSQVWADRSRLLRFCHDTGNLTLTVRQNLRWSSEVSRHADILLLRDRLRDEDFL
REIKALRRERVETILGKEELVDDPTENALYSDINGAAVEEIDCEEPRMFCLNEEDEEEDD
PSQFDSEKSQSIRESQAASPTLAAAARLSAMIHGKDRVYANAMLVDQVDDADIKYRSPEE
EEVSPEPRLGSPCWDSFSTTPPALGNCSQNRLPSSPRGRERGIREPQGPENGKEPSPRTS
PPSPFASSPSFPSSPLASAFRLFEGAQRRLTQPCLPVSPALDHRGRSLTEASRGLSPSLE
CDSGEEDILGHTYPRSSAKKQSILRSSSGEERDSFDASPDFNRTHSDSTDTPAKNPEEAE
VRLRSYSYSSPKAKPSWPLLNREATITDPAEDDAFSSGRSLLQALSLSKSLSRLNQVKQR
AFSLTESTREKRVLGFRKRAQSAEEESGASLQHLTLTEFLKEIEDEEWDKYIIPSKVESE
KYKVSRTFSFLKSRMSSTRNKTKVKGKEVKEGKEKTGASNGHQFVPTSPSGPALCVACDK
SVSGKELLQCSSCFLNVHKSCRESVAACGKKPQERNALLMKSKTLSLPHMKDNSPASIFS
SSSTLPTTTREKRETIPPFSKSLSISIDSRRLSDTAGADSEFGVTACTNSSLSDEGTPVT
ATPPSAEQPITTQDAVNAPLMSGLSADLLGLEVESWSLVVSPEFCRQHDRHTIKRQEVIY
ELMQTELHHIQTLTVMSGVFRRGMLEELQLDWDCVARIFPCLDPLLLFHKNLFGALLERR
QAAAQPENPRNYLIHRIGDILLQQFSDEYAEKMKQVYGEFCSHHTEAVNVFKELQQQNKK
LQNFVKQQSNNTLVRRREVPEFILLVTQRITKYPVLLERILHYTLEGSQEHSDLSRALAQ
IRDVIAAVDLTVNRYERCQELQEVLARLENKSFAKLKNDKVFRKQDLHSKHRDLQYKGLV
YWKTATGRLKDTLALLLTDVLVFLQEKDQRFVFAAVDQKPPVIPLQKLIVREVANEERGM
FLISASSVGPEMYEVHTTTRDERNAWMRHIRQAVESCPEEEEEEERIAETEEARRVAEVR
VQKIAKFQETLSAQDQQICNSLEEKLQLYAELTELTLRSPEPVPLRHLLVQPDNDAETPR
QASSLLTAALREAENLITILQSRDGLNVKGTSSPVRGPECCSYNSHGSSIQESPSEPDYL
STLSMSSTSPGSDSELTGLDAALWSPALELRRGDAKGTLLKVAESVQSLTQLLYSLQAAV
TLQDSCYEVQKLLLQEGERPQLRTLTSLQNSLEQEKQRSVEKKKDEVEKKGLERKKEEVD
EVKKLHVKLKQVQQRWDKEVLAREKQQCEQESVLEQREQQCLMEAERLRCEREELEAQLL
EYQHNLDRLREGQRSVEREKEKIETQQRLLQRWKHHRQSSLPVTIPLDGYKVSSHSRSGS
LDGNCSQYENEAVLLASLQQNHLHRPASNNQHQHQCLLSAAPTKNHDSPLLSSSYPANLG
LSASLYNSLNTLLSQAHGKQTPDGRTYPNPIQPFSSRVSAQPHGTNSTDFSPPFDRRSPG
PWRSEVTGDRLYEDSYSSSPSLTPLLPTQAYLSLQGQNGEEGGEENIVYL
NT seq
5553 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttttaatgtccacctttgcccgcagtggctgggagctggagatgaagctgagc
aggaggagagtgcctctgtatggccaggcgaaggtattcgcactgctggagggtttagac
tctgtgccagagtactccgaggtctacgttgttctggaaggatccactctggtccatgtc
accaaggctcagagtgacgtcatgctctgctttatagtgcctggacacaacctggctgag
gtggtctctgtccaggcctacctgtgctctgaaaccacacctgtcacctgggtgggcggg
gcttcactggagtatgtccaagatgacgctcaggacctcgcagaacacctggtaatccac
gggcattgcctgagctccgcggatcacaaggagctgagcagcctcttcaacctgggccag
gagagctctcgctgggcaatggatcgccgcgtggccctggccatggccaatctggatatc
ccccgaagctggaacgtgcttgggagccacggaggagacgagcccactctcagggagtct
cccctccacctggctgtgcggtggggtctgtgtcggctggcagagctactgctttgtcag
ccggggggtctgatggctgtcagtctgccaaacgaagagggagtcacaccgctgcagctg
gcacggacggcggccaacaccgagctcctggagcttctcacacacccacccaacccttta
gccacgcctccagcaggtctgtcccaggtgtgggcggaccggtcccgcttgctgaggttc
tgccacgatacggggaacctgactctgactgtccgacagaacctgcggtggagctcagag
gtgagccggcacgctgacatccttcttctcagggaccggctcagggatgaggacttcctc
agagagatcaaagctctaaggagggaacgcgtggagaccatcttagggaaggaagagctg
gtggatgatcccacagaaaacgcactgtattctgatatcaatggagctgctgtcgaggaa
attgactgcgaggagccgcggatgttttgcctgaacgaagaggacgaggaggaggacgac
ccatcgcagtttgactctgagaaaagccagtccataagagagagccaggccgcgtccccg
actctggctgccgctgccagactgtcagcgatgatacacggcaaagacagagtgtacgct
aacgccatgctggtggaccaggtggacgacgctgatataaaataccgttctccagaggag
gaggaggtgagccctgagccccgtcttggcagcccatgctgggactccttctccacgact
ccccctgccttggggaactgttcccagaaccgtctcccgtcctcaccccgcggcagggag
agggggatccgagaaccccaaggcccagagaatggcaaggagccgtcccctcgcacgtct
cccccctctcccttcgcgtcctccccgtcttttccttcctcccccctggcttccgccttc
cgcttgttcgagggagcacagaggcgtctgacacaaccgtgcctgccagtttctcctgct
ttggaccacagaggacgcagcttgaccgaggcgagccggggcctgagtcctagtctcgag
tgtgacagtggagaggaagacatcctgggacacacttacccccgctcgtctgcgaagaag
cagtccatcctgcgatccagctcaggggaggagagggactctttcgacgcgtctccagac
tttaaccgcacgcactctgacagcacggacacgcccgccaagaacccggaggaagccgag
gttcgcctgcgctcctactcctattcctcccccaaagcgaagccgtcgtggcctctgctg
aaccgagaagccaccatcaccgacccagcagaagatgatgcgttcagcagcggtcgctct
ctgctccaagctttatctctctctaaatccctctctcgtctcaaccaagttaagcagaga
gcattcagcctgactgagagtaccagagaaaagagggttttgggtttccgtaagcgggcc
cagtcagcggaggaggagagcggcgcatcgctccaacacctcaccctcacagagttcctc
aaagagatcgaggacgaggagtgggacaagtacataatcccgtcgaaggtcgagtcggag
aagtacaaagtcagccggaccttcagcttcctcaagagcaggatgtccagcactcggaac
aagacaaaggtgaaggggaaagaggtgaaggagggaaaggagaagacaggagcctctaac
ggacaccagtttgtccccacgtctccatccggtcccgctctctgtgtggcctgcgacaag
tctgtttctgggaaggagctgctgcagtgctccagctgtttcctgaatgtccataaaagc
tgtcgagagtctgtggcagcctgtgggaagaagccgcaggagaggaatgcgttgctgatg
aaaagcaagaccttgtctctcccacacatgaaagacaactctccggcctccattttctcc
tcctcgtctacacttcccacgacgaccagggagaagagagaaacaatcccccctttctcc
aaaagcctctcaatctctatagacagcagacggctgagtgacacagcgggggccgacagt
gagttcggcgtgacagcttgcaccaacagctcgttgtctgatgagggaacgccggtcaca
gcgactcccccatccgccgagcagccaatcaccacacaggacgccgtcaacgctcctctc
atgagcggcctgtcagctgacctgctgggactcgaggtggagtcgtggagtctggtggtc
agcccggagttctgcaggcagcatgacaggcacaccattaaacggcaggaagtcatctac
gagctgatgcagacggagctgcaccacattcaaaccctgacggtcatgtctggggtgttc
cggagaggcatgctggaggagctgcagctcgactgggactgcgttgcccggatcttcccc
tgcctggaccccctgctgctctttcacaaaaacctttttggagcgctgctggagcgccga
caggccgcggcccaacccgagaacccccgaaattacctcattcatcggatcggagacatt
ctgctccagcagttctcagatgaatatgccgagaagatgaagcaggtgtacggagagttc
tgcagccatcacaccgaggctgtcaatgtctttaaagagctgcagcaacagaacaaaaaa
ctacaaaactttgtcaaacaacagagtaataacactctggtgagacggagggaggtgcca
gagttcatcctgctggtcactcagcgcatcaccaagtacccagtgctgctggagaggata
ttacattacactctggagggaagtcaggaacactctgacctgtcgagggccctcgcccag
atacgagacgtcatcgctgcggttgacctgactgtgaacaggtacgagaggtgtcaggag
ttgcaggaagtgctggcccggctggagaacaagagcttcgccaagctaaagaacgacaag
gtgtttcgcaaacaggacttgcacagcaagcacagggatcttcagtataaagggctggtc
tactggaagaccgccacgggacgtctgaaagatactctggctctcttgctcacagacgtt
ctggtttttctacaagagaaagatcaacgctttgtatttgctgccgtggaccagaagccc
cccgtaatccctctgcagaagctcatcgttcgagaagtagccaacgaggagagagggatg
ttcctcatctccgcctcctcagtgggaccggagatgtacgaagtccacaccaccactaga
gacgagaggaacgcgtggatgagacacatacgacaagctgtggagagttgtcctgaggaa
gaggaggaggaggaacgcattgcagagacagaggaggctagacgagtggcagaagtgaga
gttcagaagatcgccaagttccaagagacgttgtcggctcaggaccagcaaatctgcaac
agcctggaggagaagttacagctctatgctgagctcacagagttaaccctccgctcgcca
gagccagtaccactacgccatctgctggtacaaccggacaacgacgctgagacaccgcga
caggcctcgtcactgctcacagctgcactcagagaagcggagaacctgatcaccattctg
cagagtcgtgatggcctcaacgtaaagggtacgagctctccggtccgaggaccagagtgc
tgcagctacaacagccacggcagcagcattcaggagtctccctctgagccggactatctg
agcacgctcagcatgagctccacctctccaggatcggacagcgagctgacggggctggac
gccgctttgtggagcccggctctggagctgagaagaggagacgccaaagggacgctgttg
aaggtggcagagagcgttcagagtctgactcagctcctctacagtctgcaggctgccgtg
accctccaggacagctgctatgaagtccagaaactcctcctccaggagggagaaagacct
cagctccgaaccctcacgtccctccaaaacagtctggagcaggagaagcagaggagcgtt
gagaagaagaaagatgaagtagagaagaagggtttagagaggaagaaagaggaggtggat
gaggtgaagaaactccacgtgaagctgaagcaggtgcagcaacgttgggacaaagaggtt
ctggccagagagaaacaacagtgtgagcaggagagcgtgctggagcagcgggagcagcag
tgcctcatggaagcagagcgtctgcgctgcgagcgggaggagctggaggctcagctgctg
gagtaccagcacaacctggaccgtctgagggagggccagaggagcgtggagagggagaag
gagaagatcgaaacccagcagaggctgctgcagcgctggaaacaccaccgccagagcagc
ctgcccgtgacgataccactggatggatataaggtgtccagccacagccgctcaggcagc
ctcgacggtaactgttcgcagtacgagaacgaagccgtccttcttgcctccctccagcag
aaccacctccaccggccagccagcaacaaccagcaccagcaccagtgtctgctctccgcc
gcgcctacaaagaaccacgacagcccgctgctcagctccagctaccccgccaacctcggc
ctcagcgccagcctctacaacagcctcaacaccctgctgagccaggcgcacggcaaacag
actccggatggtcggacgtatccaaaccccatccagcccttcagcagcagggtcagcgca
cagccgcacgggaccaacagcacagacttcagcccgccgtttgacaggcgctccccgggt
ccctggaggtcagaggtcaccggtgacagactctacgaggacagctactcctcgtctccc
tctctcacccccctccttcccacgcaggcctacctctctctccaaggacagaacggggag
gagggaggcgaggagaacattgtttatctctaa
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