Anoplopoma fimbria (sablefish): 129101444
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Entry
129101444 CDS
T09102
Name
(RefSeq) scavenger receptor cysteine-rich type 1 protein M160-like
KO
K06545
CD163 antigen
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
afb04090
]
129101444
CD molecules [BR:
afb04090
]
Proteins
129101444
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRCR
SRCR_2
Motif
Other DBs
NCBI-GeneID:
129101444
NCBI-ProteinID:
XP_054467250
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All DBs
Position
13:complement(29073901..29121798)
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AA seq
982 aa
AA seq
DB search
MRPSEQRDRQRDRRAERQTGRETVYLDVMDHLLMLLLLLLLWSSGLQAEGLHTSTESIRL
VGRDSRCAGTLELKHERSWKPVKGSGVTLKAASIACRALDCGSAVSVGWRKESSERAVWW
IKSDCVHSGNDLRECLTTDDSTFMLDVTCSDSRPVRLVNGTSLCSGRLEVKSNHSNQSNQ
SNQRWSSVCEDDFDQQDAEVVCRELGCGAPSVLQGALYGEVEAPMWTKEFQCGGHESALL
DCRSSGSDRNTCSPGKAVGLTCSEPVRLVGGASRCAGTLEVKRVFWKPIEYSDWNLKKAS
VVCRDLDCGSAVDVRRRESSNRYVWRIDYNCDKTVSDMRECLVSYSSSSIVYLTCSDSVR
LVEGTSLCSGRLEVKSNQRWSSVCEDDFDQQDAEVVCRELGCGAPSVLQGALYGEVEAPM
WTKEFQCGGHESALLDCRSSGSDRNTCSPGKAVGLTCSEPVRLVGGDSRCAGTLELKHEG
DWSPVYGYGWTLKTASVACRDLDCGSAVDVEWRKSLERSVWRIDYNCVQSGSTLKECSTS
YSSSSIVYLTCSDSRPVRLVDGTSLCSGRLEVKSNHSNQSNQSNQRWSSVCEDDFDQQDA
EVVCRELGCGAPSVLQGALYGEVEAPMWTKEFQCGGHESALLDCRSSGSDRNTCSPGKAV
GLTCSEPVRLVGGASRCAGTLELKYQGDWRPVYGPGWTLKAASVACRDLDCGSAVSVEER
KSLWGSVWWIIINCVHSGSALRECLISYSYTFILDLTCSDSVRLVEGTSVCSGRLEVKSN
HSNQSNQSNQSNQRWSSVCEDDFDQQDAEVVCRELGCGAPSVLQGALYGEVEAPMWTKEF
QCGGNESALLDCRSSGSDRNTCSPGKAVGLTCSEPVRLVGGASRCAGTLELKYLGDWRPV
AAIGTVTLKAASVACKDLDCGSAVSVGNNEKSSLRSVWFMKRRCVHPGSALRECLISTSY
SYILDLTCSGQKGEEAGQTGEH
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgagaccatcagagcagagagacagacagagagacagacgggcagagagacagacgggc
agagagacagtctacctggacgtcatggatcacctgttgatgctgttgctgttgctgttg
ctgtggagctcaggactccaggctgaaggacttcacacatcaacagagtctatcaggttg
gtgggaagagacagtcgctgtgcaggaacactggagctgaaacatgaaagatcctggaaa
ccagtaaagggctctggcgtgaccctgaaggcagcatctattgcctgtagagctctggac
tgtggctctgctgtttctgtaggatggagaaaggagtcctcagagagagctgtgtggtgg
atcaagtctgactgtgttcattcaggaaatgatctgagggagtgtttaacaacagatgac
tctaccttcatgctggatgtcacctgctcagactccagacctgtcaggctggtgaatggg
actagtctgtgctcaggtagactggaggtgaagtccaaccactctaaccagtccaaccag
tccaaccagaggtggtcctcagtgtgtgaagatgactttgaccagcaggatgcagaggtg
gtctgtagggagcttggctgtggggctccttcagtcctccagggggcgctctatggagaa
gtggaggctccaatgtggaccaaagagttccagtgtggaggccatgagtctgctctcctg
gactgtagaagctcaggctcagatagaaacacctgctcacctggcaaagctgttggactc
acctgctcagaacctgtcaggttggtgggaggagccagtcgctgtgcaggaacactggag
gtgaaacgagtattctggaaaccaatagaatactctgactggaacctgaagaaagcatct
gttgtctgtagagatctggactgtggctctgctgttgatgtaagacggagagagtcctca
aacagatatgtgtggaggatcgactataactgtgataagactgtatctgatatgagggaa
tgtttagtatcatattcctcttcctccatcgtgtatctcacctgctcagactctgtcagg
ctggtggaagggactagtctgtgctcaggtagactggaggtgaagtccaaccagaggtgg
tcctcagtgtgtgaagatgactttgaccagcaggatgcagaggtggtctgtagggagctt
ggctgtggggctccttcagtcctccagggggcgctctatggagaagtggaggctccaatg
tggaccaaagagttccagtgtggaggccatgagtctgctctcctggactgtagaagctca
ggctcagatagaaacacctgctcacctggcaaagctgttggactcacctgctcagaacct
gtcaggttggtgggaggagacagtcgctgtgcaggaacactggagctgaaacatgaagga
gactggagtccagtatatggctatggctggaccctgaagacagcatctgttgcctgtaga
gatctggactgtggctctgctgttgatgtggaatggagaaagtccttagagagatctgtg
tggaggatcgactataactgtgttcagtctggatctactctgaaggagtgttcaacatca
tattcctcttcctccatcgtgtatctcacctgctcagactccagacctgtcaggctggtg
gatgggactagtctgtgctcaggtagactggaggtgaagtccaaccactctaaccagtct
aaccagtccaaccagaggtggtcctcagtgtgtgaagatgactttgaccagcaggatgca
gaggtggtctgtagggagcttggctgtggggctccttcagtcctccagggggcgctctat
ggagaagtggaggctccaatgtggaccaaagagttccagtgtggaggccatgagtctgct
ctcctggactgtagaagctcaggctcagatagaaacacctgctcacctggcaaagctgtt
ggactcacctgctcagaacctgtcaggttggtgggaggagccagtcgctgtgcaggaaca
ctggagctgaaatatcaaggagactggagaccagtatatggccctggctggaccctgaag
gcagcatctgttgcctgtagagatctggactgtggctctgctgtttctgtagaagagaga
aagtccctatggggatctgtgtggtggatcatcattaactgtgttcattctggatctgct
ctgagggagtgtttaatatcatattcctataccttcatcctggatctcacctgctcagac
tctgtcaggctggtggaagggactagtgtgtgctcaggtagactggaggtgaagtccaac
cactctaaccagtctaaccagtccaaccagtccaaccagaggtggtcctcagtgtgtgaa
gatgactttgaccagcaggatgcagaggtggtctgtagggagcttggctgtggggctcct
tcagtcctccagggggcgctctatggagaagtggaggctccaatgtggaccaaagagttc
cagtgtggaggcaatgagtctgctctcctggactgtagaagctcaggctcagatagaaac
acctgctcacctggcaaagctgttggactcacctgctcagaacctgtcaggttggtggga
ggagccagtcgctgtgcaggaacactggagctgaaatatctaggagactggagaccagta
gcagctatcggtaccgtgaccctgaaggcagcatctgttgcctgtaaagatctggactgt
ggctctgctgtttctgtaggaaataatgagaagtcctcattgagatctgtgtggtttatg
aagcgtcgctgtgttcatcctggatctgctctgagggagtgtttaatatcaacttcctac
tcctacatcctggatctcacctgctcaggccagaagggggaggaagccgggcagacggga
gaacattga
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