KEGG   Anoplopoma fimbria (sablefish): 129101445
Entry
129101445         CDS       T09102                                 
Symbol
rapgef1a
Name
(RefSeq) LOW QUALITY PROTEIN: rap guanine nucleotide exchange factor 1
  KO
K06277  Rap guanine nucleotide exchange factor 1
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb04510  Focal adhesion
afb04910  Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:afb00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    129101445 (rapgef1a)
 09150 Organismal Systems
  09152 Endocrine system
   04910 Insulin signaling pathway
    129101445 (rapgef1a)
SSDB
Motif
Pfam: RasGEF RasGEF_N
Other DBs
NCBI-GeneID: 129101445
NCBI-ProteinID: XP_054467252
LinkDB
Position
13:complement(29206080..29226630)
AA seq 939 aa
MSSRPDSKTGSQFVSLTMRLKDKLHPQRIRRSERTKQTLSQRAKPCDLNLQHTLQPKSVC
VLEDQQRAVISSLQYFKALVDRLGVDKLVLDQSVVGGLLGGASGGVLEAVQTLVQLEPHL
HNSKTVSSCLTRLYLSLAQLIRWADQLMLQGVAHGNKDSMASVTVVIRAVLDGVKELVRL
AAERQGDSAPLSPVQSQVTVGQTFGFDDQQTSERTSTSSGAPAEKEEEEQTALAPPKPPM
PLTESLPQVSLPQVSLPQVSPQGVSPPALPPKRRSSSGPALCRVAIVAPMRREPEVDRQV
QKEDECLKRFSTSSADSAAENTHCEDDPDYDFLHTDLSSSETLPPLPHPSSLPPALPEKT
RCSTAGATTYEASASFGFDSAPPHRAAPCEDVVGPDESSSFPLSPSKTPPLPEKKRHIHQ
YLQFCSSYSAQSAAMFYQRPLTFSHHYSSKQRELETTDQLTHTHLDTQTSDSAPSPELPP
APVLPVKKRQQDPFEPDEEERTRDSSQSLQQEAEPKRRGREQHEEQEEVLLTDWEEILHR
ITMKTEDEDGPDVKAASPEILLVHATATPRGPEQVVYCEAFLSTYRSFLSPKDVIIKLQH
RYRHLCERRDPEHITAAKNTFKLLVRVVKELCATELDSDLLLLLMELVFSLLIGGELGSA
LLLRSNILSKMEQKWQLIGSPQSLRPLAARGVAARPGTLLDFRSQDLAEQLTLLDSELFC
KIQLPELLMWSKEQNDEKSPNLTEFTQHFNNVSYWVRSVIILQDKSQDREKLLLKFLKTM
KHLRRLNNFNSYLAILSALDSAPLRRLDWQKNTAEALEEYSSLIDSSSSFRAYRAALAEV
EPPCIPYLGLILQDLTFVHLGNPDTLMTSQGSKVNFSKRWQQFNILDPLRSSQQVTYTLQ
PNDDIISFFNDFSDHLAEEALWELSLRLRPRNAPRANQR
NT seq 2820 nt   +upstreamnt  +downstreamnt
atgtcgtcccggcctgacagtaagacaggctcccagtttgtgtctctcaccatgaggctg
aaggacaagctccacccacagaggatcagacgctctgagcgaaccaaacaaaccttatca
cagagagccaaaccatgtgatctgaacctgcaacacacactgcaaccaaagtcggtgtgt
gtgttggaggaccagcagcgggccgtcatcagctctctgcagtacttcaaagctctggtg
gacagactgggagttgacaaactggtcctggaccagtctgtggtgggtggtctgctgggg
ggggcatccggcggagtccttgaggcggtccagactttggtccagctggagccacacctg
cacaacagtaagaccgtctcttcctgtctcactcgtctctacctgtctctggctcagctg
atacgctgggccgatcagttgatgctgcaaggcgttgcccatggcaacaaggactccatg
gcaagcgttaccgtggtgatcagggccgtactggacggggtcaaggaacttgtacgattg
gctgcagagagacaaggcgactccgcccccttgtctcctgtccaatcacaggtcaccgtg
ggacagacatttgggtttgacgaccagcagacatcagagaggacgtctaccagctcagga
gctcctgctgagaaggaggaggaggagcagacagctttggctcctcctaagccccccatg
cctctcacagagtcactcccccaggtgtccctcccccaggtgtccctcccccaggtgtcc
ccacagggagtcagtcctccagccctgccgcctaaaagacgatcatcatcaggccccgcc
ctctgcagggttgccatagtagcaccaatgagacgagagcctgaggtcgacagacaggta
caaaaggaggacgagtgtttgaagcgcttctctacctcatctgcagactctgctgctgag
aatacacactgtgaggacgatccagactacgacttcctccacactgacctctcctcctct
gagactctccctcctcttcctcacccctcctccctcccccccgccctgccagagaagaca
cgctgcagcactgcaggagctaccacctatgaggcctcggcctcgtttgggtttgactcg
gcccccccacacagagccgccccctgtgaagatgtcgttgggcctgatgagtcctcgtcc
ttccctctgtctcccagcaagacgccccccctccccgagaagaaacgacacatccatcag
tacctccagttctgttcgtcctacagcgctcaatcagcagccatgttctaccagcgacct
ttgaccttcagtcatcattacagcagcaagcagcgcgagctggagaccactgaccagctc
acacacacacacctggacacgcagacatctgactccgccccctcacctgagctacctcct
gctccagttctaccagtgaagaagagacagcaggatccgtttgaaccggatgaggaggag
cggaccagagacagttctcagagtctccagcaggaggcggagcctaagaggaggggcagg
gagcagcatgaggagcaggaggaggtgctactgacggactgggaggagatcctccacaga
atcacaatgaagactgaggacgaggacgggccggacgtgaaagcagcgtctcctgagatc
ctattggtccacgccacggcgacgcccagaggaccagaacaggtggtgtactgtgaagcc
ttcctctccacctacaggagcttcctcagccccaaggacgtcatcatcaaactccagcac
agatacagacatctgtgtgaacgacgggaccctgaacacatcactgctgccaagaacacc
ttcaagctactggtcagagtggtgaaagagctgtgtgccacagagctggactctgatttg
ctgctgctcctgatggagctggtgttcagcctcctgattggtggagagctcggctcggcc
ctcctgttgcgctccaacatcctgtccaagatggagcagaagtggcagctgattggctct
cctcagtcactccgccccctcgcggccaggggcgtggctgccagaccaggaaccctgctg
gacttcaggagccaggacttagctgaacagctgactctgctggactcagagctcttctgc
aagatccagcttccagagctcttgatgtggtctaaagagcagaatgatgagaaaagtcca
aacctgacagagttcacccaacacttcaacaacgtctcctactgggttcgttctgtgatc
attcttcaggataaatctcaggacagagaaaaactgttgctgaagttcctgaagaccatg
aagcacctgcgaaggctgaacaactttaactcgtacctggccatcctgtcagcgctagac
tctgcccccctgcgacgcctagactggcagaaaaacacagctgaggctctagaggagtac
agctctttgattgacagctcatcatcatttagagcctacagagcagctctggctgaggtg
gaacctccctgtataccctacctggggttgatccttcaggacttgaccttcgtccacctg
gggaatcctgacacgttgatgacatcacagggatcaaaggtcaacttctctaaacgctgg
cagcagttcaacatcctggaccctctgaggagctcccagcaagttacttacactctgcag
cctaatgatgacatcatatcgttctttaatgacttcagcgatcacctggctgaggaagca
ttgtgggaactctcgctgagactccgcccacgaaatgccccacgagccaatcagagatga

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