Anoplopoma fimbria (sablefish): 129101445
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Entry
129101445 CDS
T09102
Symbol
rapgef1a
Name
(RefSeq) LOW QUALITY PROTEIN: rap guanine nucleotide exchange factor 1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04510
Focal adhesion
afb04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129101445 (rapgef1a)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
129101445 (rapgef1a)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
129101445
NCBI-ProteinID:
XP_054467252
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All DBs
Position
13:complement(29206080..29226630)
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AA seq
939 aa
AA seq
DB search
MSSRPDSKTGSQFVSLTMRLKDKLHPQRIRRSERTKQTLSQRAKPCDLNLQHTLQPKSVC
VLEDQQRAVISSLQYFKALVDRLGVDKLVLDQSVVGGLLGGASGGVLEAVQTLVQLEPHL
HNSKTVSSCLTRLYLSLAQLIRWADQLMLQGVAHGNKDSMASVTVVIRAVLDGVKELVRL
AAERQGDSAPLSPVQSQVTVGQTFGFDDQQTSERTSTSSGAPAEKEEEEQTALAPPKPPM
PLTESLPQVSLPQVSLPQVSPQGVSPPALPPKRRSSSGPALCRVAIVAPMRREPEVDRQV
QKEDECLKRFSTSSADSAAENTHCEDDPDYDFLHTDLSSSETLPPLPHPSSLPPALPEKT
RCSTAGATTYEASASFGFDSAPPHRAAPCEDVVGPDESSSFPLSPSKTPPLPEKKRHIHQ
YLQFCSSYSAQSAAMFYQRPLTFSHHYSSKQRELETTDQLTHTHLDTQTSDSAPSPELPP
APVLPVKKRQQDPFEPDEEERTRDSSQSLQQEAEPKRRGREQHEEQEEVLLTDWEEILHR
ITMKTEDEDGPDVKAASPEILLVHATATPRGPEQVVYCEAFLSTYRSFLSPKDVIIKLQH
RYRHLCERRDPEHITAAKNTFKLLVRVVKELCATELDSDLLLLLMELVFSLLIGGELGSA
LLLRSNILSKMEQKWQLIGSPQSLRPLAARGVAARPGTLLDFRSQDLAEQLTLLDSELFC
KIQLPELLMWSKEQNDEKSPNLTEFTQHFNNVSYWVRSVIILQDKSQDREKLLLKFLKTM
KHLRRLNNFNSYLAILSALDSAPLRRLDWQKNTAEALEEYSSLIDSSSSFRAYRAALAEV
EPPCIPYLGLILQDLTFVHLGNPDTLMTSQGSKVNFSKRWQQFNILDPLRSSQQVTYTLQ
PNDDIISFFNDFSDHLAEEALWELSLRLRPRNAPRANQR
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcccggcctgacagtaagacaggctcccagtttgtgtctctcaccatgaggctg
aaggacaagctccacccacagaggatcagacgctctgagcgaaccaaacaaaccttatca
cagagagccaaaccatgtgatctgaacctgcaacacacactgcaaccaaagtcggtgtgt
gtgttggaggaccagcagcgggccgtcatcagctctctgcagtacttcaaagctctggtg
gacagactgggagttgacaaactggtcctggaccagtctgtggtgggtggtctgctgggg
ggggcatccggcggagtccttgaggcggtccagactttggtccagctggagccacacctg
cacaacagtaagaccgtctcttcctgtctcactcgtctctacctgtctctggctcagctg
atacgctgggccgatcagttgatgctgcaaggcgttgcccatggcaacaaggactccatg
gcaagcgttaccgtggtgatcagggccgtactggacggggtcaaggaacttgtacgattg
gctgcagagagacaaggcgactccgcccccttgtctcctgtccaatcacaggtcaccgtg
ggacagacatttgggtttgacgaccagcagacatcagagaggacgtctaccagctcagga
gctcctgctgagaaggaggaggaggagcagacagctttggctcctcctaagccccccatg
cctctcacagagtcactcccccaggtgtccctcccccaggtgtccctcccccaggtgtcc
ccacagggagtcagtcctccagccctgccgcctaaaagacgatcatcatcaggccccgcc
ctctgcagggttgccatagtagcaccaatgagacgagagcctgaggtcgacagacaggta
caaaaggaggacgagtgtttgaagcgcttctctacctcatctgcagactctgctgctgag
aatacacactgtgaggacgatccagactacgacttcctccacactgacctctcctcctct
gagactctccctcctcttcctcacccctcctccctcccccccgccctgccagagaagaca
cgctgcagcactgcaggagctaccacctatgaggcctcggcctcgtttgggtttgactcg
gcccccccacacagagccgccccctgtgaagatgtcgttgggcctgatgagtcctcgtcc
ttccctctgtctcccagcaagacgccccccctccccgagaagaaacgacacatccatcag
tacctccagttctgttcgtcctacagcgctcaatcagcagccatgttctaccagcgacct
ttgaccttcagtcatcattacagcagcaagcagcgcgagctggagaccactgaccagctc
acacacacacacctggacacgcagacatctgactccgccccctcacctgagctacctcct
gctccagttctaccagtgaagaagagacagcaggatccgtttgaaccggatgaggaggag
cggaccagagacagttctcagagtctccagcaggaggcggagcctaagaggaggggcagg
gagcagcatgaggagcaggaggaggtgctactgacggactgggaggagatcctccacaga
atcacaatgaagactgaggacgaggacgggccggacgtgaaagcagcgtctcctgagatc
ctattggtccacgccacggcgacgcccagaggaccagaacaggtggtgtactgtgaagcc
ttcctctccacctacaggagcttcctcagccccaaggacgtcatcatcaaactccagcac
agatacagacatctgtgtgaacgacgggaccctgaacacatcactgctgccaagaacacc
ttcaagctactggtcagagtggtgaaagagctgtgtgccacagagctggactctgatttg
ctgctgctcctgatggagctggtgttcagcctcctgattggtggagagctcggctcggcc
ctcctgttgcgctccaacatcctgtccaagatggagcagaagtggcagctgattggctct
cctcagtcactccgccccctcgcggccaggggcgtggctgccagaccaggaaccctgctg
gacttcaggagccaggacttagctgaacagctgactctgctggactcagagctcttctgc
aagatccagcttccagagctcttgatgtggtctaaagagcagaatgatgagaaaagtcca
aacctgacagagttcacccaacacttcaacaacgtctcctactgggttcgttctgtgatc
attcttcaggataaatctcaggacagagaaaaactgttgctgaagttcctgaagaccatg
aagcacctgcgaaggctgaacaactttaactcgtacctggccatcctgtcagcgctagac
tctgcccccctgcgacgcctagactggcagaaaaacacagctgaggctctagaggagtac
agctctttgattgacagctcatcatcatttagagcctacagagcagctctggctgaggtg
gaacctccctgtataccctacctggggttgatccttcaggacttgaccttcgtccacctg
gggaatcctgacacgttgatgacatcacagggatcaaaggtcaacttctctaaacgctgg
cagcagttcaacatcctggaccctctgaggagctcccagcaagttacttacactctgcag
cctaatgatgacatcatatcgttctttaatgacttcagcgatcacctggctgaggaagca
ttgtgggaactctcgctgagactccgcccacgaaatgccccacgagccaatcagagatga
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