Anoplopoma fimbria (sablefish): 129101521
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Entry
129101521 CDS
T09102
Symbol
cux2b
Name
(RefSeq) LOW QUALITY PROTEIN: homeobox protein cut-like 2
KO
K09313
homeobox protein cut-like
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129101521 (cux2b)
Transcription factors [BR:
afb03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
129101521 (cux2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
DUF6236
Motif
Other DBs
NCBI-GeneID:
129101521
NCBI-ProteinID:
XP_054467342
LinkDB
All DBs
Position
13:20752252..20842582
Genome browser
AA seq
1538 aa
AA seq
DB search
MAADVGSMFQYWKKFDLRRLQRELNSVASELAGRQEESEHSHKHLVELSREFKRNVPEEV
REMVAPVLKSFQAQVVALNKRSKEAESAFLGVYKQLIEAPDPAPVLEASHTLEERLQHLH
SSAPDSEALVREISGHWKKHLECLEKTDSSEDSPAVSGAAVTEEAPGSSSPASLMTPNST
PAPGAPGXPQQNYQDRAENRGEGEESANAGLADRLSEAEEKIKVLHSSLDTAQTELLELR
CKYNQEMTNKAEEVDAIMANLEKANQRAEKAQREVERLKEQIASGQRATTGSCHPAEGTS
REKSEKCEVLPSQLEAALLAKDREILRLLENIQRLQYTLQEVQETSANQILELERQLAYK
AEAIERLEAKLQSQMDYEEIKTELSILKVMKMASANGSSSQNSAKAAEAILLDKEAFLPS
HKYLVDKARILHSIDDDHSEDAGRETGRPPGSHSSSSNADGRASPSPGPPTLDGSSSSQD
LPRPFSVSPCSGDRLSGDHILHRQLLSPHFKKEGLVAFPSTLYAAKVALMSATQGSVGSG
SVDAGLPSDQSESGSSTAGDDDQVDTAEIAYQVKEQLLKHNIGQRVFGHYVLGLSQGSVS
EILARPKPWRKLTVKGKEPFIKMKQFLSDEQNILALRTIQVRQRGSITPRIRTPETGSDD
AIRNILEQAKKEIQSQRGGEGKSSLNSSSGRSSNGPGSSSDETIKNILDQARREMEAQQH
ALMEMEACGRAPTASSGPQVERLGPPERSRGLPLPISIKQEEGGCVTVCMANPISSPQTP
LSVLSPAAFVQNIIRKVKSEIGEVGTYFDQHWSHERGSMVLSGGGSSLPFNSVSPSLSSS
SSGPSALPRPWPRLENGECLPNSEEASAAEDELGLGRPVEVKVESDTSVSGESPGPGPGR
LSYYPAYIPRALKPTVPPLTPEQYEMYMYREVDTLELTRQVKEKLAKNGICQRIFGEKVL
GLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLLDQLGQSLSQPPNHSHALDKSPVTA
HSSPSPPPSPAESHPSPLVEPVSLSLESSKENQQPESLGLGLPPHPEGGKSTPGLMALHQ
PTNPLGIQEIVAMSSELDTYAITKKVKEVLTDNNLGQRLFGETILGLTQGSVSDLLSRPK
PWHKLSLKGREPFVRMQLWLNDPHNVDKLRAMKKMEKKAYLKRRYGLLSTGSDSDSPSTR
SECVSPSLSSLDLCPYSQAKKPRVVLGAEEKESLRKAYLLEPYPSQNTIEILASQLKLKT
NTVINWFHNYRSRMRREVLMEGLLDNDTDAEHQSYSPSMTRSPNSDGEERRMQQLSGHIH
SSFPLSANTALPHVKQEAMDREDEGREGSVKQSRVQCFSTAVQFPQLKSEHDDSIAGCRE
PHSAGQSLRQEEGMSSQAQGLYPGSVSIDGPQRTIQSRHEGEDSGKSPVDPVSFKASSEP
CRSSLEVSLNSPSAASSPGLMMSVSPVPSSSAPISPSLPNPPSTSTNHSLDPNQLPPFQS
PKLNRSSQRRNEKMANLNNIIHRLERAANREETLEWEF
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgatgtaggatcgatgtttcaatattggaagaaatttgatctacggcggctc
cagagggagctaaactctgtggcgtctgagctggctggtcgacaagaggagagcgaacat
tcccacaagcacctggtagagctgagcagggagttcaagagaaatgtccctgaggaagtc
cgggagatggtggcacctgttctcaagagtttccaggcccaggtggttgctctgaacaag
cgcagcaaggaggccgagtctgcgttcctgggagtctacaaacagcttatcgaggcccca
gatccagcacctgtgctggaggcctcacacaccctggaggaaaggctgcagcaccttcac
agttcggccccagacagcgaggccctggtacgagagatcagcgggcactggaagaaacac
ctggagtgccttgaaaagacagattcatcagaggacagtccagcagtctcaggggcagca
gtgacagaggaggccccaggatccagctctccagcctccctgatgacgcccaacagcaca
ccggcccccggggccccaggcntcccgcagcagaactaccaggaccgagctgagaaccga
ggggaaggggaggagagcgccaatgctggtttggctgacagactatcagaggccgaggag
aagatcaaggttctgcattcatctttggacacggcacagacagagctgctggaactgcgg
tgtaaatacaaccaggagatgacgaacaaggcggaggaggtcgacgccatcatggccaat
cttgagaaagcaaaccagagagcggagaaggcccagagggaagtggagaggctaaaggag
cagatagccagtggccagagagccaccacagggagctgccatccagcagagggcaccagc
cgggagaagagcgagaagtgcgaggtgttgccctcccagctggaggctgccttgctggct
aaagatcgcgaaatcctccgacttcttgagaacattcagcggctgcagtacacgctacag
gaagttcaagagacctcggccaatcagatcctagagctggagcgccagctggcctataaa
gcggaagctatcgagagattagaagctaaactgcaatcccagatggactatgaagagatt
aaaactgagctcagtatcctaaaggtcatgaaaatggcttcagcaaacggcagctcatcc
cagaattctgccaaggctgcagaggctattttgctggataaagaggcctttcttccatct
cacaaatacctggtggataaggcccgaatattgcacagcattgatgacgaccattctgag
gatgcaggtagggagactggcaggccgcccggctcccactcgtcctcctcaaatgcggac
ggccgtgcatcccccagccccggcccccccaccctggacggctcctcctccagccaagat
ctaccccgtcccttttccgtgtcgccctgctccggggacagactgtcaggagaccacatc
cttcacaggcagctcctctccccacactttaaaaaggagggcctcgtggcttttcccagc
accctctatgcagccaaagtcgctctaatgtcagccacccaagggtccgtggggtcgggc
agcgtggacgccggcctgccaagcgaccagtcagaaagcggcagctcgactgcgggagac
gacgaccaagtggacacggcggagatcgcctaccaggtgaaggagcagctgctgaagcat
aacattggccagcgtgtgttcggccactacgtgctgggcctctcccagggctcggtcagt
gagatcctggcaagacccaaaccctggaggaagctgactgtgaaaggcaaagaacctttc
attaagatgaagcagttcctctctgatgaacagaacatcctagcacttaggaccatccag
gtccgacagagagggagcatcactccgcgcatccgaactccagaaactgggtcagacgac
gccatcaggaatatcctggagcaggccaagaaggagatccagtcccagaggggaggtgaa
ggcaagtcgtctctgaacagctcatcaggcagaagcagtaacgggccaggcagcagctct
gacgaaaccataaagaacatcctagatcaggccaggagggagatggaggcccagcagcac
gccctgatggagatggaggcctgcgggagggccccgactgccagctcaggacctcaggta
gagcgtctggggcccccggagcgctccaggggcctgcctctacccatctccatcaaacag
gaagagggaggctgcgtcacggtctgcatggccaaccccatcagcagcccccagacgccc
ctcagcgtcctctcccccgccgcctttgtccagaacatcatccgcaaagtcaagtcggag
attggtgaagtgggcacctacttcgaccagcactggtcccatgagcgagggtcaatggtg
ctcagtggcggaggtagctctctgccattcaactcggtctctccctccttgtcttcctcc
tcttccgggccctccgccttgccccgcccgtggccccgtctggagaacggcgagtgtctc
cccaacagcgaggaggcctctgctgctgaggacgagctggggctgggccggccggtggag
gtgaaggtggagtcggacacatcggtaagtggagagtcccccgggcccggcccaggaagg
ctgtcctactacccagcgtacatcccccgtgccctgaagcccaccgtgccaccgctgact
ccagagcagtacgagatgtacatgtaccgagaggtggacaccctggagctgaccagacag
gtgaaggagaagctggcgaagaacggcatctgtcagaggatctttggtgaaaaggtgctg
gggctttctcagggcagtgtgagcgacatgctgtctcggcccaaaccctggagcaagctg
acccagaaaggcagggagcccttcatccgcatgcagctgtggttactggaccagttaggc
cagagcctcagccagcccccaaaccacagccacgctctggacaaaagcccagtgacggcc
cattcctcgccctccccgcctcctagcccggcggagagccacccaagtcctctggttgag
cctgtcagcctctccctggagagcagcaaggagaaccagcagcctgagagcctgggcctg
ggtttgcccccccacccagagggagggaaatccacccccggcctcatggccctgcatcag
cccacaaacccactgggtatccaggagatagtggccatgtcttcggagctagacacctac
gccatcaccaagaaggtcaaggaggtgctaacagacaacaacctaggccagcgtcttttt
ggggagaccatcctgggcctgactcaaggctcggtgtctgacctgctctccaggcccaaa
ccttggcacaaactcagcctgaaaggcagggagccgtttgtccgcatgcagctgtggctc
aatgatcctcacaacgtggacaagctgagggccatgaagaagatggagaagaaagcctat
ctgaaaaggcggtacgggctgctgagcaccggctcggacagcgactcgcccagcactcgc
tctgagtgtgtgagtccgtccttgtcctcgctggacctgtgcccatacagccaggcgaag
aagcctcgggtggtactgggagctgaggagaaagaatccctgaggaaggcctacctcctg
gagccctacccctctcaaaacaccatcgagatactggcatcccagctcaaactcaaaaca
aacactgtcatcaactggttccacaactacaggtccaggatgcgacgggaggtgctgatg
gagggtctgctagacaatgacaccgatgcggagcaccaaagctactccccctccatgacc
cggagccccaactctgacggagaggagaggaggatgcagcagctctcaggacacatccac
tccagctttcctcttagcgccaacaccgcactgcctcatgtcaaacaggaggcgatggac
agggaagacgagggaagggagggctccgtgaaacagtccagagtccagtgtttctccaca
gcggtacagttcccgcagctgaaaagcgaacacgacgattccatcgctggctgccgcgag
cctcactcggccggccagagcctgaggcaggaagaagggatgagcagccaggctcagggg
ctctaccccggctcagtctccatagacggcccccagagaaccatccagtccaggcacgag
ggggaagactccggaaagtcccccgttgaccccgtcagcttcaaggcctcgtcggagccc
tgccgcagcagcctggaggtctccctcaactccccctctgccgcatcctcgcccggcctc
atgatgtcagtctcccccgtcccctcctcctctgctcccatatcgccctcgctgcccaat
ccgccctcaacgagcaccaatcacagcctggaccctaaccagctcccgcccttccagagc
cccaaactcaacagaagctctcagagacgcaatgagaaaatggccaacctcaataacatc
atccacaggctagagagagcagccaatcgagaggaaacactggaatgggagttttaa
DBGET
integrated database retrieval system
