Anoplopoma fimbria (sablefish): 129101550
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Entry
129101550 CDS
T09102
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129101550
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Meiosis-specific proteins
Others
129101550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
129101550
NCBI-ProteinID:
XP_054467380
LinkDB
All DBs
Position
13:complement(22262867..22276904)
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AA seq
1509 aa
AA seq
DB search
MCENSCFPSIRFKALDYVFETSTSLTVMMNLLALPTPYFTGTSDLYPHRGKLPEVTYRTP
WTRGKVISTCKLFVSGSVLDDLGEKSQADISPERFEVTLSEVKGDLEVIPSSNPDSLKDL
DQDEYVCLLKESWINNPCQESFLKWTTDQMKHGNEKKDLFLPEELIVDYLPHFKRHLPTL
KAKLSRLRTLPVADPLLSSTGDTISEDAIFRHCASYEKPPDVNTREIQTCGNIQEEFGKE
SLLKEESLLLPVVVDTLKLSQENCTAFSSICDRMTVAPEQLDEQLPVLDVLYKGFLSDGS
SSIDISQFKVPEEPDKKCNIKGGLMELEGRVKLPNEMELDMTLTPSPKRSQTQICPSTCE
LQEEELSVLCRGSLVSAKAQKEMETALWKAEKHPTFVVGFLLAEPHIYEPAVDFQPLSEA
WKVLKSENRPFISVGDKLQSQMEIGAPQMFLCNNRDFTESMRPEIPSTTEEKMEDFKKLS
PEHVEFTPVLMNPTNKTQSTHLKKCETTADDTRLQKETSADLSQNAFLMRSVNTNNKEVK
PATFIFSKSAAATNTKDEVSDKRLLDVAGMFSARMNDVNAGRDDRKTEQSPLSSRDNHRC
LPVTRRPPEKALDPLATFMMLRSQQTAAVTEAHQSSTPAPNVDQQKPASEHHQSPPALMQ
RSDQRPAAYMSGAVSANATREQNAAGQVTGKISPPVRQSIPQNRQDSRVVQIQATDSQQR
AHCELLAFAQPSLSSARKLGLHFPVRGDFSCLSPDQTHFLLKQQERALCRTQAQSAELII
NQELLFNQAALIHVLVTFKELLLKCDLATALEYLTKAAEACADQSLVQLVKRLQIILYLS
HKNQESNLKLLELQKLLASWLHGRTGQNNMEKILVIISVDSDDIRSLIISSLSHVAGAAV
TAVCPEEGKKKMNGASVISSMCDSVCVVVYEQHVGPDFPWSSFSLVVEYDHAGQSPWATV
CRERSISHLTFNTSIDEQKASWCLEDNVPYVLFVTEGLLNCALLLQTLESGFEITVLERS
HCPSLQMLGGTHHYAVITVDESTAIMVQEEDELCQERASERVVMRLTALSLQYNSCWLIL
HCRDSKGGGFSTEAFSNLVLVYSSLVLFGMKSEDLDIKVLIVSEVTEIAKWISQICFHSL
MASEKDPLNYLDRDWLTVIPSEEEKCLSQFPCINPLVSQLMLRRAPTVQWLLGASLSQLM
ELLPEVPHKVLKLFSDTTSLYTLTTDQPESQTLITETNQHTSPPNSPWTTTAAPEYMNSD
PQPEPPITPHPELFSSDHNTSFLFRADRSFSEPDPDPMVQEGNADFRLDLSSSFGSPDVP
LQRSWTSSDPWREEDRGREEVTFSGWRRRAGAVGRVVGRVNDEWTPRAPTNLSADTRGVR
MESPFKLDSTFTYSHILQQPANSQISTHSAVYSDLQYPDINHISFSLSPPAEVERWGRGQ
NSDEYLTRSAEKTPISANYGSKCWIGQERKRRGEAAGLVGTVLTPLKRGRLSYEKVPGRS
DGQTRLKLF
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaaaacagctgtttcccttccatcagatttaaagctctggactatgtctttgag
acctccaccagtctgacagtgatgatgaacttactggcactgcccaccccttacttcact
gggaccagtgacctttacccccacaggggcaagctgcctgaagtcacctacaggacacca
tggaccagaggaaaggtgatctcaacctgcaaactcttcgtcagtggttctgtgctcgat
gacctgggagaaaaaagccaagcagatatttcaccagaaagatttgaagtgactctgagt
gaggtgaaaggggatctggaggtgatacccagctctaatcctgactcactgaaggatcta
gaccaggatgagtatgtctgtcttttaaaggagtcatggatcaataatccgtgtcaggaa
tcatttttgaagtggacaactgaccagatgaaacatggaaatgaaaagaaagatctcttc
ctgccagaagagctcatagttgattacctgccacactttaagagacatttacccacgctg
aaagctaaactgtccaggcttaggacgcttcctgtggccgaccctctgctgagctcaaca
ggagataccatctctgaggacgccatattcaggcattgtgcgtcttatgaaaaacctcct
gatgtgaacaccagggagattcagacatgtggaaacattcaagaggagtttggtaaagag
tcactgttgaaagaagagtctcttttgctgcctgttgtagtggacacattgaaactgagc
caagaaaactgcaccgccttctcaagcatttgtgatcgaatgactgttgctcctgaacag
ctggatgagcagcttccagtcctggatgtgctttataaaggtttcctttcagatggatcg
tcatccattgacatttcccagtttaaagttccggaggagcctgacaagaaatgcaacata
aagggaggcttgatggagctggaaggacgtgtgaagcttcctaatgaaatggagctggac
atgactttgaccccgagtccaaagagaagtcaaacccaaatctgtccgtccacatgtgaa
cttcaggaggaggagctgtcagtgctctgcagaggatctttggtgtctgcgaaagctcag
aaagagatggagacggcgctttggaaggcggagaagcatccaaccttcgtggtgggcttt
ctgttggcagaacctcatatatatgaaccagctgtcgacttccagccgctgtctgaagcc
tggaaagtcttaaaatcagagaatcgacctttcatcagcgttggtgacaaattgcagtca
cagatggagattggagccccgcagatgtttttgtgcaacaatagagacttcacagagagc
atgaggcctgagattccctccaccacagaggaaaagatggaggacttcaaaaaactgtcc
cctgaacacgtcgagttcacacccgtcctgatgaatcccacaaacaaaactcagtcaact
cacctgaagaaatgtgaaactactgcggacgacacccgtcttcaaaaagaaacttcagca
gatttgtctcagaacgccttcctgatgcgctctgtcaacacaaacaataaggaagtaaaa
cctgcaacctttatattttctaaatctgctgctgccaccaacaccaaagatgaagtttca
gacaaaaggcttttagatgttgcaggcatgttttctgctcgtatgaacgacgtcaacgca
ggtagagacgaccgtaagacagagcagagccctctgtcctccagagataaccacagatgt
ctgccggttacgagacgtccaccagagaaggccctcgaccctctggccaccttcatgatg
ctgagatctcagcagacggctgcggttactgaagcacatcagagctcaactccagcacca
aacgtggaccaacaaaaaccagcatctgagcatcatcagtctcctccagcgctgatgcaa
agatcagatcagaggccagcagcgtacatgagtggtgctgtgtcagcaaatgctaccaga
gagcagaacgcagccggtcaggtgacgggtaaaatcagtcctcctgtccgtcagtccatc
cctcagaacagacaggacagcagagtggtccaaatccaagctaccgacagccagcagcga
gcccactgtgagctgctggccttcgctcagcccagtttgagctctgccagaaagctgggg
cttcattttcctgttcggggagacttcagctgcctgtccccggaccaaacacacttcctc
ctcaaacagcaggagagggcgctctgcaggacacaagcacagagcgcagagctgatcata
aatcaggaactgcttttcaaccaggcggctctgattcatgtgctggtgacatttaaggag
ctgctgctgaagtgtgaccttgctactgcattggagtacctgaccaaggcagctgaggcg
tgtgcggatcagagtctggtgcagctggtgaagaggctgcagatcatcctctacctcagt
cacaagaaccaggagtccaacctcaaactgctggagctgcagaagctgctggcttcatgg
ctgcacggcagaacaggacagaacaacatggagaaaattcttgtcataatatcagttgac
tctgacgacatcagatctttaatcatcagcagtttgagccacgtggctggtgctgctgta
acagctgtttgtcctgaggagggcaagaaaaaaatgaacggtgccagtgtgatcagcagc
atgtgtgacagtgtgtgtgtggtggtgtatgagcagcacgttggccctgacttcccctgg
agcagtttctctctggtggtggagtacgaccatgcaggccagtcaccgtgggcaacagtc
tgcagagagaggagcatcagtcacctcaccttcaacacatccatcgatgagcaaaaagcc
tcgtggtgcctcgaggacaatgtgccgtatgtgttgtttgtcacagaggggcttctcaac
tgtgcactgctgcttcagacactggagtcagggtttgaaataactgttctggagaggagc
cactgtccgtccctgcagatgctcggagggacccatcactacgctgtgatcacagtggat
gaaagcaccgctatcatggtccaggaggaggatgaactgtgtcaggagcgagccagtgag
agagtagtgatgaggctgaccgctctgtctctgcaatacaactcctgttggctcatcctg
cactgcagagacagcaagggaggaggattttccactgaagccttcagcaacttggtgttg
gtttattcctctctggtgctgttcggcatgaagtctgaggatctagacatcaaggtgctg
attgtgtccgaggtgactgaaatagccaaatggatcagccagatctgctttcacagcctg
atggccagtgagaaggacccgctcaactacctggacagagactggctgactgtgattcct
tcagaggaggaaaagtgtctgtctcagttcccgtgtatcaaccctctggttagtcagctg
atgctgaggagagcgccgaccgtccagtggctcctgggggcctctctgtctcagctgatg
gagctgctccccgaggtgccacataaagtcctcaagctgttcagtgacaccacctccctg
tacacactgaccacagaccagcccgagtctcagacactcatcactgagacaaatcaacac
accagtccaccaaacagcccctggaccaccactgctgctccagagtacatgaactctgac
ccacagccagaaccccccatcacgccccatccagaactattcagtagtgaccacaacacc
agcttcctgttcagagctgatcgcagcttcagtgaaccggacccagacccgatggtgcag
gagggcaatgcggatttcagactggacttgagttcctcctttggcagcccagatgttccc
ctacagaggagctggaccagcagcgatccatggagagaggaggaccgaggcagagaggag
gtgacgttttctggctggagacgcagagctggagcagtggggagagttgtcggaagagta
aacgatgagtggactccgagagctccaacaaacctcagtgccgacactcgaggagtcaga
atggaaagtcctttcaagctggactccacattcacttacagccacatcctgcagcagcca
gccaacagtcagatctccacacactctgcagtttacagcgacctccagtacccagatatc
aaccacatttccttcagtctgagcccgcccgcagaggtcgagaggtggggtcgaggtcaa
aacagcgacgaatacctcacgaggagcgcagagaaaacgccgatttcagccaactatggc
tccaaatgctggataggacaagagaggaagaggaggggcgaagctgccggtttggttgga
acagtgttgacaccactgaagagggggaggctgagctatgagaaggtgcccggcagaagt
gatggacagacgaggctcaaattattttag
DBGET
integrated database retrieval system
