Anoplopoma fimbria (sablefish): 129101574
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Entry
129101574 CDS
T09102
Name
(RefSeq) long-chain-fatty-acid--CoA ligase ACSBG2-like
KO
K15013
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb00061
Fatty acid biosynthesis
afb00071
Fatty acid degradation
afb01100
Metabolic pathways
afb01212
Fatty acid metabolism
afb03320
PPAR signaling pathway
afb04920
Adipocytokine signaling pathway
Module
afb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
129101574
00071 Fatty acid degradation
129101574
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
129101574
03320 PPAR signaling pathway
129101574
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
afb01004
]
129101574
Enzymes [BR:
afb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
129101574
Lipid biosynthesis proteins [BR:
afb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
129101574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
129101574
NCBI-ProteinID:
XP_054467417
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Position
13:22127404..22139051
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AA seq
728 aa
AA seq
DB search
MSVQEGSVMSNGVAVMDGKAESICTQKALLDSTNLKIHSTLILNGEETTSELEEATEGLS
LEEPKAVPLTTANRPAPLAPADKLWSTSRDKAVRLRMEGSGPASETPITIHQLFLETVEA
YGDHPALASKKGGQWETLSWRQYYEQCRAAAKSYLKLGLERYHGVGILGFNSAEWFISNV
GCIFAGGLATGIYTTNSPEACQYVAANSEANVMIVENQKQLDKILQVKDHLPHLKAIVQY
KGELQQKAPFLYTWAEFMKLGEDVPDEQLNNVIDSLRANECCSLIFTSGTTGNPKGVMLS
HDNLTWTVRTATNTLNLKHAEEVVVSYLPLSHVAAQLVDMWLCISFAVTVYFADPDALKG
SLVNTLKEVRPTCFLGVPRVWEKMQEKMKAVGAKASPMKRTVAGWAKSIGLQYNYSVMNG
ENQVPWGFMLANNLVFKKVRDALGLDRCKLCFTGAAPITKETLEYFMSLNIPLLELYGMS
ESSGPHTVSSGTFYRMTSCGKGMPGSKTKLENPDEDGSGEICMWGRHIFMGYLDMPDKMS
EALDQDGWLHSGDLGRHDQNDFLYITGRIKELIITAGGENIPPVPIEDLVKAEVPIISNA
MLLGDKLKFLSMLLTLKCVADDNGEPTDELSPEALIFCQQHDVTATKVSEIIANKEPAIY
KAIQEGMERVNARATSNAQKIQKYVILERDFSVDGGELGPTLKLRRPIVVKMYQEKINEL
YAVAAERP
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtccaagagggttcggttatgagcaatggtgttgcagtcatggatggtaaagct
gagagcatctgtacccaaaaggcactgttagattccacaaacttaaaaattcactcgacc
ctcatcctcaatggagaagaaaccacatctgagctggaggaagccactgagggactttca
ctggaggagcccaaggcagttcctttgacaacggccaacagaccagcgcctctggcccca
gcggacaagctgtggagcaccagcagagacaaggcagtcaggctgaggatggagggctcg
ggcccggcctcagagactcccatcaccatccatcagctgtttctggagacggtggaagcg
tacggggatcatccagccttggcttccaaaaaagggggccagtgggagaccctgtcgtgg
aggcagtactatgagcagtgccgggctgcagctaagagttacctcaagttggggctggag
cgttaccatggcgtggggattctgggattcaactccgccgaatggttcatctcaaatgtc
ggctgcatctttgcaggaggtctggcaactggaatttacaccaccaactcgcccgaagct
tgtcagtatgtggctgcaaacagtgaggccaacgtcatgattgtggaaaaccagaaacag
ctcgacaaaatcctgcaggttaaagatcatctgcctcatctgaaagctattgtccagtat
aaaggcgaactgcagcagaaagcaccgttcctgtatacatgggcagagttcatgaagctg
ggagaggatgtgccagacgagcagttaaataatgtgattgacagtcttcgggccaacgag
tgctgttctctcatcttcacctctggaaccaccggcaaccctaaaggagtcatgttgagt
catgacaatctgacatggacagtcagaacagcaactaacacgctcaatttaaagcacgct
gaggaggtggtggtcagttacctgccgctcagccacgtggcagcccagctggttgacatg
tggttgtgtatttcttttgccgtgacggtctactttgcagatccagacgccctcaagggc
tccttggtaaacacacttaaagaggttcgtccgacttgtttcctgggggttcctcgtgtg
tgggagaagatgcaggagaaaatgaaagctgtcggtgccaaggcttcaccaatgaagagg
acagtggcaggctgggcaaagtctataggcctgcagtacaactacagtgtcatgaacggg
gagaatcaggtgccctggggcttcatgttggctaacaatctggtctttaagaaggtccgt
gatgcgctgggcctggaccgctgcaagttatgcttcacaggcgctgcgcccatcaccaaa
gagactctggagtacttcatgagcctgaacatccctttgttggagctatacggcatgagt
gaaagctccggcccacacaccgtctccagtggcaccttttaccgcatgacaagctgtgga
aaagggatgccaggcagcaagacgaagctggagaacccagatgaggacggcagcggagag
atatgtatgtggggtcggcacatctttatgggctacctggacatgccggacaaaatgtca
gaggctctcgaccaggacggctggcttcactctggagatctgggaagacacgaccagaat
gacttcctgtacatcacaggaaggatcaaagaactgatcatcactgcaggtggagagaac
atccctcctgtgcccattgaggatttagtgaaggccgaggtgcccatcatcagcaacgcc
atgctgttgggagacaagctgaagttcctctccatgctgctcacactcaaatgcgtggcg
gatgacaacggcgagcccacggatgagctgagccccgaggctttgatcttctgccagcag
cacgacgtcacagccaccaaggtgtccgagatcatagccaataaggagccagctatttac
aaagccatacaggaaggcatggagcgcgtcaacgccagagcaacgtccaacgcccagaag
atccagaagtacgtgatactggagcgagacttctctgtcgatggaggtgaactgggacct
accttgaaactgaggagacccattgttgtgaagatgtaccaggagaaaataaatgaattg
tatgcagtggccgctgagagaccgtag
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