Anoplopoma fimbria (sablefish): 129101622
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Entry
129101622 CDS
T09102
Symbol
smyd1b
Name
(RefSeq) histone-lysine N-methyltransferase SMYD1b isoform X1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb00310
Lysine degradation
afb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
129101622 (smyd1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129101622 (smyd1b)
Enzymes [BR:
afb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
129101622 (smyd1b)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
129101622 (smyd1b)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
129101622 (smyd1b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
TPR_12
Motif
Other DBs
NCBI-GeneID:
129101622
NCBI-ProteinID:
XP_054467482
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Position
13:8720595..8727618
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AA seq
489 aa
AA seq
DB search
MENVAIFDSPGKGRGLKATKEFWAGDVIFAEPSISAVVFDSLADRICHSCFRRQEKLQRC
GQCKSAHYCDRTCQRAGWAEHKQECGAIKAYAKAPNENIRLVARIMWRLDKEGSVMSDMQ
LTTLEELEDHIADMQEDELKDLKVDIHNFLDYWPRTSKQHTIDDISHIFGVINCNGFSVS
DQRGLQAVGVGLFPNLCLVNHDCWPNCTVILNHGNQSAVNTMFHSQRRIELRSLGKIEEG
EELTVSYVDFLNLSEERRRMLKTQYFFDCTCENCKNHIKDDLKMGGAEVDGVKPTEEQVK
EATDYCFQMLEKMENARLNGNYHEVVKICKDCLEKTEPVLADTHIYQLRIWSTLSEVQAY
LQFFNDASDYSRKMVDGYLKLYHPNNAALGMAAMRAGVTHWQAGEIEIAHGMICKAYAIL
MVTHGPIHPISKDLEAMRMQTEMELRMFKQNEYVYHSMREAALKNKPMSIMHEPKSVEEG
IKNLFHRRK
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgtggcgatatttgactcacctggaaaaggaaggggtcttaaggcgaccaag
gagttttgggctggagacgtcatttttgccgagcccagtatctcagctgttgtgtttgac
agtctagcagatcgtatttgccacagctgtttccgcagacaagaaaagctacagagatgc
ggccagtgcaaatctgctcattattgtgaccggacttgccagcgcgccggctgggccgaa
cacaagcaagaatgtggtgccatcaaagcttatgccaaagcacccaacgagaacatccgt
ttggtggcccgcatcatgtggcgccttgacaaagaggggagcgtgatgtcagacatgcag
ctgaccacactggaggagctggaggatcacatagccgacatgcaagaggacgagttgaag
gacttaaaagtggacatccacaacttcctggactactggccccgcaccagcaagcagcac
acaattgacgacatttcacacatttttggagtgattaactgtaacggtttctctgtgagc
gaccagaggggccttcaggcagtcggagttggtcttttcccaaatctgtgtttggtgaat
cacgactgctggccaaactgcaccgtgatcctcaaccacggcaatcaatcggctgtgaat
actatgtttcattctcaacggaggattgagctgcgttctctcggtaagatcgaggaggga
gaggagctgacagtctcatacgttgacttcttgaatttgtcagaggagagacgaagaatg
ctgaaaacacaatacttctttgactgcacatgcgagaactgcaagaaccacatcaaagac
gacttgaagatggggggcgcggaggtggacggagtcaagcctacagaggaacaggtgaaa
gaggcaacagattactgctttcaaatgctggagaagatggaaaacgctcggctaaatggc
aactaccatgaggttgtaaaaatctgcaaggactgcttagagaagacagagccagttttg
gccgacactcacatctaccagctgaggatatggagcacattaagtgaggtgcaggcttac
ctgcagttctttaatgatgcttcagattactcccgcaaaatggtggacggatacttgaaa
ctgtaccaccctaacaatgccgctctgggtatggcggccatgcgagcaggagtgactcac
tggcaagctggggagatagagattgcccatgggatgatctgcaaggcctacgccattctc
atggtcacccacggtccaatacatcccatctccaaggacctggaggcgatgcgtatgcag
acagagatggagctgaggatgttcaagcagaacgagtacgtttaccacagtatgagagag
gcagctctgaagaacaagccaatgtccattatgcatgaacccaagtctgtggaggaggga
atcaagaatctcttccaccggaggaagtaa
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