KEGG   Anoplopoma fimbria (sablefish): 129101664
Entry
129101664         CDS       T09102                                 
Symbol
fem1c
Name
(RefSeq) protein fem-1 homolog C
  KO
K25805  protein fem-1 homolog A/C
Organism
afb  Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:afb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:afb04121]
    129101664 (fem1c)
Ubiquitin system [BR:afb04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Target recognizing subunit
     129101664 (fem1c)
SSDB
Motif
Pfam: Ank_2 Ank Ank_4 Ank_3 Ank_5 ANK_LRRK2 Ank_KRIT1 TPR_12 TPR_NPHP3 TPR_10 TPR_2
Other DBs
NCBI-GeneID: 129101664
NCBI-ProteinID: XP_054467540
LinkDB
Position
13:6289095..6297736
AA seq 618 aa
MDLKTAVFNAARDGKLRLLQKLLENKDGHEVTKMMGEKTNGATPLLMASRYGHLDLVEYL
LECCSAPVEVGGSVNFDGETIEGAPPLWAASAAGHLKVVQSLLGHGASVNSTTLTNSTPL
RAACFDGHLDIVKYLVEHKADLEVANRHGHTCLMISCYKGHKEIAQYLLERGADVNRKSV
KGNTALHDCAESGSLEIMRMLLQFGASMEQDGYGMTPLLSASVTGHTNIVDDLTTHQQTS
HTERIDALELLGATFVDKKRDLLGALKYWKRAMDLRYLDSNNIVHKPEAKQLIMAYDYAR
EVTNGEELDGLISDPDEMRMQALLIRERILGPQHPDTSYYIRYRGAVYADSGNFERCINL
WKYALDMQQSNLDPLSPMTASSLLSFAELFSFMLQDRAKGLLGTSVSFEDLMGILSKSVL
EIERAVTQNGPMPPDPAQLSKALSIILHLICLLEKVPCTAEQDHFKKETIYKFLKLQPCG
KNGYSPLHLAVDRNTTCVGRYPVCKFPSLTVASILLECGADVNSRDEDDNSPLHIAASNG
HPDIMNLLISCGTHFDSTNAFQQTACDLLDEKELSRNIIQPINHTTLQCLAARAIVKHSL
DYHGNIPEKLEAFVLLHR
NT seq 1857 nt   +upstreamnt  +downstreamnt
atggatttaaagacggcggtgttcaacgcagcccgggacgggaagctgcggctgctgcag
aagctgctggagaacaaagatggacacgaggtgaccaagatgatgggcgagaagaccaac
ggggccactccgctgctcatggcctcccggtacggacacctggacctggtggagtacctg
ctggagtgctgcagcgctcccgtggaggtgggcggctcggtcaactttgacggggagacc
atcgagggggcgccgcctctgtgggcagcctcggcggcgggtcacttgaaggtggtccag
tccctgctgggccacggagcttctgtcaacagcaccaccctgaccaactccacccctctg
agagcggcgtgcttcgacggccacctggacattgtgaagtacctggtggagcacaaggca
gacctggaggtggccaacagacacgggcacacgtgtctcatgatctcctgctacaaagga
cacaaggagatcgcacagtacctgctggagagaggagcagatgtcaacaggaaaagtgta
aaaggcaacacagcgcttcatgactgtgcagagtcgggcagtcttgagatcatgaggatg
ttactgcagtttggagcatccatggagcaggacggttacggcatgacgcctctgctgtct
gcgagcgtcacaggccacactaacatcgtagacgacctcacgacgcaccaacagacaagc
cacacagagcgcatcgatgccctggagctcttgggagccacatttgtagacaagaagaga
gatctgctcggagcattaaaatactggaagagagccatggacctcaggtacctggacagt
aacaacattgtccataaaccagaagccaagcagctgatcatggcatacgactacgccagg
gaggtaacaaacggagaggagctggatgggctgatatctgacccagatgagatgcgcatg
caggcactgctcatccgtgaaagaatcctcggcccacaacatccagacacgtcttattac
atccgttaccgaggtgccgtctacgctgactctgggaactttgagcgctgtatcaatctg
tggaagtatgcattggacatgcagcagagcaacctggaccccctcagccccatgacagcc
tccagcctgctgtcgttcgctgagctcttctccttcatgctgcaggaccgagccaaaggg
ctcctggggacatcggtgtcatttgaggacttgatggggatcctttccaagagtgtgttg
gagattgagcgggcagttacgcaaaatggaccgatgcctccggaccctgcccagctcagc
aaggccctgtcaatcatcctgcacctcatttgtcttttagagaaggtgccctgtaccgca
gagcaggaccacttcaaaaaggaaaccatctataaattcctgaagctccagccgtgtggt
aagaacggctacagtccactacacttggctgtcgaccgcaacaccacctgtgtgggccgc
tatcccgtctgcaagttcccctccctcacagtcgcctccatccttcttgagtgtggggca
gatgtgaacagccgcgatgaagatgacaacagcccccttcacatagccgcttccaatggc
caccccgacatcatgaacctgctgatatcatgcgggactcactttgacagcaccaacgcc
ttccaacaaacggcctgcgacctcctggacgagaaggagctgtccagaaatataatccag
cccataaaccacaccacgctgcagtgcctggccgccagggccatcgtcaagcacagcctc
gattaccacggcaacatccctgagaaactagaggccttcgtcttgctgcacagataa

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