Anoplopoma fimbria (sablefish): 129101664
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Entry
129101664 CDS
T09102
Symbol
fem1c
Name
(RefSeq) protein fem-1 homolog C
KO
K25805
protein fem-1 homolog A/C
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129101664 (fem1c)
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
129101664 (fem1c)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
ANK_LRRK2
Ank_KRIT1
TPR_12
TPR_NPHP3
TPR_10
TPR_2
Motif
Other DBs
NCBI-GeneID:
129101664
NCBI-ProteinID:
XP_054467540
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Position
13:6289095..6297736
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AA seq
618 aa
AA seq
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MDLKTAVFNAARDGKLRLLQKLLENKDGHEVTKMMGEKTNGATPLLMASRYGHLDLVEYL
LECCSAPVEVGGSVNFDGETIEGAPPLWAASAAGHLKVVQSLLGHGASVNSTTLTNSTPL
RAACFDGHLDIVKYLVEHKADLEVANRHGHTCLMISCYKGHKEIAQYLLERGADVNRKSV
KGNTALHDCAESGSLEIMRMLLQFGASMEQDGYGMTPLLSASVTGHTNIVDDLTTHQQTS
HTERIDALELLGATFVDKKRDLLGALKYWKRAMDLRYLDSNNIVHKPEAKQLIMAYDYAR
EVTNGEELDGLISDPDEMRMQALLIRERILGPQHPDTSYYIRYRGAVYADSGNFERCINL
WKYALDMQQSNLDPLSPMTASSLLSFAELFSFMLQDRAKGLLGTSVSFEDLMGILSKSVL
EIERAVTQNGPMPPDPAQLSKALSIILHLICLLEKVPCTAEQDHFKKETIYKFLKLQPCG
KNGYSPLHLAVDRNTTCVGRYPVCKFPSLTVASILLECGADVNSRDEDDNSPLHIAASNG
HPDIMNLLISCGTHFDSTNAFQQTACDLLDEKELSRNIIQPINHTTLQCLAARAIVKHSL
DYHGNIPEKLEAFVLLHR
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaagacggcggtgttcaacgcagcccgggacgggaagctgcggctgctgcag
aagctgctggagaacaaagatggacacgaggtgaccaagatgatgggcgagaagaccaac
ggggccactccgctgctcatggcctcccggtacggacacctggacctggtggagtacctg
ctggagtgctgcagcgctcccgtggaggtgggcggctcggtcaactttgacggggagacc
atcgagggggcgccgcctctgtgggcagcctcggcggcgggtcacttgaaggtggtccag
tccctgctgggccacggagcttctgtcaacagcaccaccctgaccaactccacccctctg
agagcggcgtgcttcgacggccacctggacattgtgaagtacctggtggagcacaaggca
gacctggaggtggccaacagacacgggcacacgtgtctcatgatctcctgctacaaagga
cacaaggagatcgcacagtacctgctggagagaggagcagatgtcaacaggaaaagtgta
aaaggcaacacagcgcttcatgactgtgcagagtcgggcagtcttgagatcatgaggatg
ttactgcagtttggagcatccatggagcaggacggttacggcatgacgcctctgctgtct
gcgagcgtcacaggccacactaacatcgtagacgacctcacgacgcaccaacagacaagc
cacacagagcgcatcgatgccctggagctcttgggagccacatttgtagacaagaagaga
gatctgctcggagcattaaaatactggaagagagccatggacctcaggtacctggacagt
aacaacattgtccataaaccagaagccaagcagctgatcatggcatacgactacgccagg
gaggtaacaaacggagaggagctggatgggctgatatctgacccagatgagatgcgcatg
caggcactgctcatccgtgaaagaatcctcggcccacaacatccagacacgtcttattac
atccgttaccgaggtgccgtctacgctgactctgggaactttgagcgctgtatcaatctg
tggaagtatgcattggacatgcagcagagcaacctggaccccctcagccccatgacagcc
tccagcctgctgtcgttcgctgagctcttctccttcatgctgcaggaccgagccaaaggg
ctcctggggacatcggtgtcatttgaggacttgatggggatcctttccaagagtgtgttg
gagattgagcgggcagttacgcaaaatggaccgatgcctccggaccctgcccagctcagc
aaggccctgtcaatcatcctgcacctcatttgtcttttagagaaggtgccctgtaccgca
gagcaggaccacttcaaaaaggaaaccatctataaattcctgaagctccagccgtgtggt
aagaacggctacagtccactacacttggctgtcgaccgcaacaccacctgtgtgggccgc
tatcccgtctgcaagttcccctccctcacagtcgcctccatccttcttgagtgtggggca
gatgtgaacagccgcgatgaagatgacaacagcccccttcacatagccgcttccaatggc
caccccgacatcatgaacctgctgatatcatgcgggactcactttgacagcaccaacgcc
ttccaacaaacggcctgcgacctcctggacgagaaggagctgtccagaaatataatccag
cccataaaccacaccacgctgcagtgcctggccgccagggccatcgtcaagcacagcctc
gattaccacggcaacatccctgagaaactagaggccttcgtcttgctgcacagataa
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