Anoplopoma fimbria (sablefish): 129101747
Help
Entry
129101747 CDS
T09102
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
129101747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129101747
Membrane trafficking [BR:
afb04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
129101747
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
129101747
RAVE complex
129101747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
EIF3I
PEP5_VPS11_N
Beta-prop_EML
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_2nd
Beta-prop_Vps41
Beta-prop_IP5PC_F
VIR_N
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
129101747
NCBI-ProteinID:
XP_054467631
LinkDB
All DBs
Position
13:complement(9035218..9086529)
Genome browser
AA seq
3103 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGSFNNVPFTAYASGCDVVILGSDFERLQIIPGAKHGNIQV
CCVDCSLQGGQIAASYGSIVCVFEPVQHPDQKDTSLTKLNCQWQKTGQFVLKSMVRNLAW
HPTGSTLLTGSSSLQLWSNVDGVKDEAEEVGTQTEMTMRDTHSAWRCIWESKMASQVSLM
KFSTDGEFFATAGQDDCLVKVWYNTSKWKLGVSRLFTPPEPSDCFQGELAFSFVYLAHPR
SVTGFSWRKTSKYMPRGAVCNVLLTCCKDSVCRLWAETLLPGDGLLSGYHNNHASGRHND
TPGCTGPSSNTCNGKSQGRAAQELNFQESLHGSFHRDVPQPSQTGCLPHHQSRHYRHKTS
SSSMPHANALCHFHIAASINPATDIPLLPSISSLSSVDDEEPGGPFTVHWLNNKELHFTL
AMEVFLQQLRGSLEQQDEGSHEEPEDENNFDEEDNSSRPSDSQGPEAAELPLAAVKHQVD
VLLEEWNKGADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQAQVSFVSRIPVAFPTGDAI
SLSHSVVMYACNKNVDLAIQHGRQRPPGSTLPQTKSALISYGGQGKAAPSSSLRLSIFTP
NVLMISKHADGSLNQWAVGFAEDSAFSTVLSVSHKSRYCGHRFHLNDLACHSLLPLLLTT
SHHNALRTPEADSILAPPDAYSSGFPHPASLPRGARPSRGSLGGVFQDPNAIYSELILWR
VDPVGPLSLSGGVSELARINSLHASAFAQVAWLPTFIPSSCLGVYCNSPSACFVASDGHS
LRLYQAVIEAKKLLSELSNPEISKYVGEVFNIISQQSTAKPGCIIELDTITDFQGKETQL
LHVFEEDLILGSERTASTQETPDPPHTASSKAAFSARFFLVVVELTPTGRSLLHMWHLHL
AAQPITMEETTKETDATSASPMNSSTFSFDTFSSPIAQKSKPCTSNLQSACRLSLTTHRL
YSQEMALPEGVEAISVTPSAGHLSASCSLPADRVPYLLATSCSDGKVRFWRCNVTATEPA
SMDSLVYQWEEWALLVEERLPSSSAVSVQGRPIEVSCCHSGRIAVAYKQIPNTPLNSTPY
LNSHQLLTSPPKLASSPYMNNNTNTHLTPTLTVQRSPNLTPSQNAANTREPLVHIGIFQC
ESTGGSQWNLEQTIVLDNTYPTPGSASNPGNMDLPVPNDDCPGSTCKSLVHLDWVSQEDG
SHVLTVGIGTKIYMYGRLSGKPPELGVTSDASRDQSSSRLVLLRSVDLVSSVEGSLPIPV
SLSWVRDGILVVGMDCEMHVYSQWQPPAPSKPNAPLAQDTDISSSVSSIISAIRQSQEEG
PSSGAPMSSLAPPKKALTRSMMSLAQKLSGKRTAYDLPVEMEDSGLFEAAHQLFPTLPQY
HPVQLLELMDLGKVHRAKAILSHLVKCIAGEIVALKDSTTNPEKRVRSRTISAGGSTARD
RKMFSKAENSSPDYTEISSIPPLPLYALLAADEDTLPKPDKVGSVSGDSGHGSSHTDVYD
ELFHTPTIVDLDPLEDDQEETGNKVIDLSQYSPTYFGPEHAQVLSSHLLHSSLPGLTRME
QMSLMALADTIATTSTDLKDSQGKSKGGETLDECGLKFLLAVRLHTFLSTSLPPAHRAQL
LRQGLSTCHYAWAFHSEAEEELLNMLPALQKGAPTWPELRSMGVGWWLRSTNKLRRCIEK
VAKTSLQRNNDPLDAAIFYLAMKKKAVVWGLYRSQKNAKMTEFFRNNFSEDRWRKAALKN
AFSLLGKQRFQHSAAFFLLAGSLKDAVEVCLEKMQDLQLALVISRLYESEFESASTYKKI
LQRHVLGQDKQIPAHPDPFLRSIAHWVLEDYSRALDTLLEQPVNSTSSGSTGSKCDAGSS
SVSTCNPEVFNFYTYLRTHPLLLRRHFGSSDKAKVGLTAEGRRADSISLEERRLFFTAAY
AHLSAGCPMLALEVLSKMPKVRKHSELPNQADTGIAAELSVGSKNGQTSDPGWSQPALNG
YESDGHSLSNSQSDSVLSFDWSQQSLSHTDEHLELKWDSDKDGEDEDDEEQTKNVDSSSV
FQDTQDALSPLMETGTGEDREDCNDFLAPSNDILAAQLKFTACLKIMTNELRTLSTGYEL
EGGKLRFQLYQWLEREVVALQRCCSYKPCLPELSVQGDAPVSGLVEEEQPGSPHGDSQRS
RRHWLQSNQPLLRMFLSYCSLHGSHGGGLASVRMELILLLQESHQYDSTQPAVIPCCQPT
SIPLLMACTANVKTVVANPIVYLTNLAHDILKTINSLDSPPHPDVVNNEIYVMHTLAASL
SACIYQCLCDGHTHSHVNHFTGIVYQSVLLSQKQPVRTLSMDESVQPNTSPAQWPGIATL
IRLLSSAGEDSQPGLTVLLCEILTAVFLSLFVHGMATHSSNELFRIVAHPLNSKLWVTVF
GGGARTPVIEKPNSPTRTPPPASPSGSDRKSRRFRLRSSRSGSRDESGIERESPCSPKHG
PVVEQEATSIFKERFVPPELSIWDYFIAKPSLPPSEDRIEYDSEESQDSQDEEEDDNEYE
DVFDPSSPQREHSNHNSYSWCLMRLAMVQLVLVNLKSFYPMAGYDLLDLPVGSPLCHAVL
KTLQRWEQVLQKRLEIFGGPPSTYISAPLQDETAAPGPALLRHKALFEPSNTPFRTSHHS
ALPVKRLWQFLVKQEEVQETFIRNIFTKKRDPNESGEDGTDNMKCSGMEETGNNQTESGL
ASPGGKARIIHKESDIITAFAINKANRNCLVMASTHDIQELDVSSILATQIMTWIDDDDA
DVKSVGGDDFLVVHARDDFAALHGTTPYTHSSPGTPINMPWLGGVQTGRGAAVMIKRNIN
NVRRMTSHPTLPYYLTGAQDGSVRMFEWGHSQQIICFRSPGNSRVTRIRFNHQGNKFGIV
DADGGLSLWQTNTSGNAPKPYLTLQCHNKTAHDFVFVGSSSLIATAGLSTDNRNVCLWDT
LVTPANSLVHAFCCHESGATVLSMASRQQLLITGGRKGWISVLELAHRHQRQSFQAHDSP
VKALAVAPTEDCFISGSAEGNIKIWSLATQCPLYTFPNEHARQSLFRNLGTGVMQIEVGP
TNHIFSCGADGTMKMRVLPNRFSVINNNNNNHGNLKNDVKFII
NT seq
9312 nt
NT seq
+upstream
nt +downstream
nt
atgaatctccatcaggtcctcacaggagctgtcaaccccggagacaattgtttctctgta
gggagcttcaacaacgtgccattcacggcctatgcgtcgggttgtgacgtggttattttg
ggcagtgactttgagcggctgcagatcatcccaggggccaaacatggcaacatccaggtc
tgctgtgtcgactgctcgctgcagggtggacagattgcagcttcctatggaagcattgtg
tgcgtctttgagcctgttcagcatccagatcaaaaagacacttcactgactaagttgaac
tgccaatggcagaaaaccggtcaatttgtattaaagtctatggtacggaacctggcctgg
caccccacaggcagcacactcttaacaggctctagtagcctccagttatggtctaatgtt
gatggagtgaaagatgaagctgaggaagtgggaacgcagacagaaatgaccatgagagac
actcattctgcctggaggtgcatctgggagagcaagatggcctctcaagtcagtttaatg
aagttctctactgatggggaattctttgctactgctggtcaggatgactgcctggtaaag
gtctggtacaacaccagtaagtggaagttgggtgtttccagactcttcacacctccggaa
ccaagtgactgtttccagggagagctggccttctcctttgtctacctggcccatccccgc
tctgttactggcttctcgtggaggaagaccagcaagtacatgccaagaggcgcagtgtgt
aatgttctgctcacctgctgcaaggacagcgtgtgtcggctctgggcagagacactcttg
ccgggggacggcctcctgtctggttaccataacaaccacgcttctggccgacacaatgac
acccccggatgtacgggcccttctagcaacacctgcaatgggaagtcgcaaggaagagca
gcacaagaattgaattttcaagaatcattgcacggctcctttcaccgggacgtcccgcag
ccctctcagactggctgcctgcctcaccatcagagcaggcactacaggcacaagacgagc
agcagcagcatgcctcatgccaacgctctctgccacttccacatcgctgcaagcatcaac
cctgccacagacatacctctgctgccctccatctcctctctgagttccgtggatgacgag
gaacctggaggtccgtttactgtccactggctcaacaacaaagagcttcatttcactcta
gctatggaggtcttcctgcagcagctccgaggcagcctggagcaacaggatgaaggctcc
catgaagagcctgaagatgagaataactttgatgaggaagataatagcagcaggccaagt
gactcccagggacccgaggctgcagagcttcctctggcagcagtgaagcaccaggtggac
gtgctgttagaagagtggaataaaggggcagacatgttgttcagtatccatcccatggac
ggctctcttttagtctggcatgtggactggttagatgaataccagccgggcatgttcaga
caagcacaggtgtcgtttgtgtcccgtattcctgtggcgttccccacaggggatgcaatc
tccttgagccacagtgtggttatgtatgcctgcaacaagaacgtggatctggccatccaa
cacggcagacagcggccacctgggagcacactgcctcaaaccaaatctgctctaataagc
tacggaggtcagggaaaagctgcccccagcagtagtctaagacttagcattttcaccccc
aacgtcctgatgatttccaaacacgctgatggctctctgaaccagtgggcagtgggcttc
gcagaggactctgctttctccactgtgctcagcgtctctcacaagtcaaggtactgtggt
caccgcttccacctcaatgacctggcctgtcactcattactgcctctgctcctcaccacc
tcgcaccacaacgccttgaggacgccggaggcagacagcatcctggcccctccggacgcc
tactcctctggtttccctcatccagcatctctgccccgaggggcacgacccagccggggg
tccctgggtggagtgttccaggatcccaatgcgatctacagtgaactgattttatggaga
gtggaccctgtcggcccgctgtctttgtctggcggggtctctgagctagctcggatcaat
tccctacatgcttcagcgtttgctcaagtagcctggctgcccacattcattccaagcagc
tgtttaggtgtgtactgtaactctcccagcgcctgcttcgttgcaagtgacggccactca
ctcaggctgtatcaggctgttattgaagctaagaaactcctgagtgagctctccaatcca
gagatatcaaaatatgtcggggaggtgttcaacatcatcagtcagcaatccacagcaaaa
ccagggtgtattatagagctggataccattactgactttcagggaaaggagacccagctc
ctgcatgtttttgaggaggatctgatcctcggcagtgagagaacagcgagcacacaggaa
actcctgatcctcctcacactgcctcgagcaaggcggcgttctcggcacgttttttcctt
gttgtggtcgaattgaccccgacaggtcgctcactcctccacatgtggcatctccatctt
gctgctcaacccatcaccatggaagagaccacgaaagagacggatgcgacctcagcttct
cctatgaacagctctacgtttagctttgacactttcagttctccaatagctcagaagagt
aaaccctgcacttccaatctgcaaagtgcctgtcgcctcagtctcacaacacacaggcta
tacagccaggagatggctctgcctgaaggggtggaagccatcagtgttactccctcagca
ggtcacctgagtgcgtcatgttctctgccagcagatcgtgtgccctacctccttgctact
tcctgttctgatggaaaggtgcgcttctggaggtgcaatgtcactgcgacagagccggcc
agtatggacagcttggtgtaccagtgggaggagtgggctctgctggtggaggagaggctt
cccagcagcagcgcagtaagtgtgcaaggtcgccccatagaggtcagctgctgtcactct
ggacggatcgcagttgcctacaagcagataccaaacacacctctgaactcaactccttat
ctgaactctcaccaactgttgacttctcctcccaaactggcttcctccccttatatgaac
aacaacaccaacactcacctgaccccaaccctgactgtacagcgcagcccaaatctcacc
ccaagccaaaacgcagcaaatactagagaaccattggtccacattggaatcttccagtgc
gagtccactggtggttcgcagtggaatctagagcagaccatagtcctggacaacacatat
cccacacctggaagtgccagtaacccaggtaacatggacctccctgtacctaacgacgac
tgtcctggttctacttgtaagagccttgttcatttggactgggtctcccaagaagatggg
tcacacgttctgaccgttggtattgggacaaagatttacatgtacggccgtctctctggg
aagcctccagaactcggtgtgacatctgatgccagtagagaccagagctcgtcgcgcctg
gttctgcttcgatcagtcgatctggtctcctctgttgaaggctcgttacccattccagtc
tccctctcctgggtcagggatggcatcttggtagtaggcatggactgtgagatgcacgtc
tactcccagtggcagccaccggcaccatccaaacccaatgccccgcttgcccaagacaca
gacatcagcagcagcgtctcctctatcatctcagccatcaggcagagccaggaggaaggt
cccagctccggggcccccatgtcttcacttgctcctcccaaaaaggccctgacgagatca
atgatgagcctggctcagaaactcagtgggaagaggacagcttatgacctgcctgtcgag
atggaagattctgggctcttcgaagcagctcaccaactctttcccactctgcctcagtac
catcctgtacagttactggagctcatggatctagggaaggttcaccgtgccaaagccatc
ctgtcccacctggtgaaatgcattgctggagaaattgtggcccttaaagacagtaccacc
aatcctgagaaacgtgtgcgctctcgaaccatcagcgccggaggcagcacagccagggat
cggaagatgttcagcaaagcagagaactccagccctgactacacagagataagctccatc
cctcctctgcctctgtacgccctgctggcagccgatgaggatacattaccaaaacctgat
aaagtgggcagtgtgagtggagatagtgggcacggttctagtcacactgatgtttatgat
gagctctttcatacacccaccattgtggacctggaccctctggaagatgatcaagaggaa
acggggaacaaggttattgacctgtcccagtacagtccaacatactttggtccagagcat
gcgcaggttctgtccagtcacctccttcattccagtttgccgggcttaacccgtatggag
cagatgtctctcatggcgctggctgacaccatcgctaccacaagcactgacctcaaggac
agccagggcaaaagcaaaggtggagagacgctggacgagtgtggtctgaagttcctgctg
gccgtcagactccacaccttcctctctacctccctgcctccagcacaccgagcacagctg
ctgcggcaaggcctgtcaacatgtcattacgcctgggccttccactctgaggctgaagag
gagctgctcaacatgctgcccgccctgcagaagggagcgcccacctggcctgagctacgc
tccatgggcgtgggctggtggctgcgcagcaccaacaagctacgcaggtgtattgaaaag
gttgccaagacgtctttacaaagaaacaatgatcctctggatgcagctatattttacctc
gccatgaagaaaaaggcagtggtctggggattgtacaggtctcagaagaatgccaaaatg
acagagtttttccgcaacaacttcagcgaggaccggtggaggaaagcggcgctgaaaaat
gccttttctctgttgggaaagcagcggttccagcactctgcagccttcttccttctagct
ggctcccttaaggatgctgtggaggtgtgtttagagaaaatgcaggacctacagcttgcc
ctggtgatctccagattgtacgagtctgagtttgagtcagcatccacctacaaaaagatc
cttcagagacatgttctgggacaagacaaacagattccagcccatccagacccattcctg
cgcagcattgctcactgggtccttgaggactacagcagagccttggacactctacttgag
cagccggtgaacagcaccagctctgggtccactgggagcaaatgtgatgcaggttcctca
tcggtgtctacatgtaaccccgaggttttcaacttttacacctaccttcgaacccaccct
ctcctccttcgtcgccattttggctcctcagacaaggctaaagttggactgactgctgag
ggtcgcagggctgactccataagcctggaggagaggagactgtttttcacagctgcgtac
gcacacctgtcagctggctgccccatgctagcactagaagtcctctccaagatgcccaaa
gtccgcaagcattctgagctgcccaaccaggcggatacaggcatcgctgctgaacttagt
gttgggagcaagaacggacaaacatcggacccgggatggtcccagccggctctgaacggc
tacgagtcagacggacacagcttatccaacagccaatcagattcagtgttaagctttgac
tggagccagcagtcactgtcacatacagatgagcacctggagctgaagtgggacagcgac
aaagatggagaagatgaggatgatgaggaacaaactaaaaatgtagacagcagcagtgtg
ttccaggacacacaggacgccttgtcgccgctaatggagacagggacaggtgaggacagg
gaggactgcaatgacttcctggctccgtcgaatgacatcttagcggcccagctgaagttt
actgcctgcctgaagattatgaccaatgagctccgaacgctgtcgaccggttatgaactg
gaaggagggaagctacgtttccagctctaccagtggttggagagagaggtggtggctctc
cagcgttgctgcagctacaagccgtgcttgccagagctgtctgtccagggtgatgccccc
gtttctgggttggtggaggaggaacagcctgggagtcctcatggtgacagccagaggagc
agaagacactggctgcagagtaaccagcccttactgaggatgtttctgagctactgcagc
ctgcatggctcccacggtggaggactggcctctgtgcgcatggagctcatattattgctt
caagagtctcaccagtatgactccactcagccagcggtgattccatgttgtcaaccaaca
tctattcctctcctgatggcgtgcacggccaacgtaaagacagtggtggcaaatcccatc
gtctacctcaccaatctggctcatgacatcttgaagaccatcaattcactggactctcct
ccacatccggatgtggtcaacaatgagatctatgtgatgcacacattggctgcctccctg
tcagcttgtatatatcagtgtctgtgtgacggacacacccacagccatgtgaaccatttc
acaggaatcgtgtatcagagtgttttgctgtcccagaagcagccagtcagaacgctcagt
atggacgagtctgttcagcccaacacttcccctgcacagtggccaggtatcgccactctg
attcgcctgttgagctcagcaggcgaggatagccagccaggcttaaccgttctgctctgt
gagatcctgactgctgtcttcctcagtctgtttgttcacggcatggccactcactccagc
aacgagctgtttcgcatcgtggcccacccactgaacagcaagctctgggtgactgtgttc
ggaggaggcgcacggacccctgtcatcgagaaacccaacagcccaacaagaacaccccca
ccagcctcaccaagcggctcagacaggaagtccagacgattcaggctccggtcgtcccgc
agtggatccagggacgagtctgggatcgagcgggagagcccatgcagtcccaagcatggc
cctgtagtggaacaagaagctacctccatctttaaagaacgatttgtccctccagagctc
agcatttgggattactttatcgccaagccgtcgctgccaccatcagaagacaggatagaa
tatgactcagaggagagccaggacagtcaagatgaagaggaagatgataatgaatatgaa
gatgtgtttgaccccagctctccacagagagagcactcaaaccacaattcatacagttgg
tgtttgatgcgactggcaatggttcagctggtgttggtcaacctcaagtccttttaccca
atggcaggatatgatctactagatctgcccgtgggctctcctctttgtcacgctgtgctg
aagacgctgcagcgatgggagcaggtgctacagaaaaggctggagatcttcgggggcccc
ccatccacgtacatctccgcccccctccaggatgaaaccgccgcaccgggccccgccctg
ctcaggcacaaggccctgtttgaaccatccaacaccccgttcagaactagccaccattct
gcactgccagtgaagcgtctgtggcagtttctggtcaagcaggaagaagtgcaggagact
ttcattagaaacatttttaccaagaaacgggacccgaatgagtcgggtgaggacgggact
gacaatatgaaatgttcagggatggaggagacaggaaacaatcagactgagtcaggtctg
gcctcccccggaggaaaggcacgcatcattcacaaggaatctgacatcatcacggccttt
gccatcaacaaggcaaaccgtaattgtttagtcatggcatccacccatgacattcaggag
ttggatgtgtcatccatcttggccacacagatcatgacatggatcgatgacgatgacgca
gatgtcaaaagtgttggtggtgatgacttcctggtggtccatgcacgtgacgactttgct
gccctccacggcaccacaccgtacactcacagtagccccggtacacccatcaacatgccg
tggctgggaggagtgcagacaggccggggtgctgctgtgatgatcaaaagaaacatcaac
aatgtgagaaggatgacctcccatcccacactgccctactacctgacaggagctcaggat
ggaagtgtcaggatgttcgagtggggtcactcccagcagatcatctgcttcagaagtcca
ggcaactccagagtcaccaggatacgattcaaccaccagggaaacaagtttggtattgtc
gatgctgatggaggtttgagtctctggcagaccaacacaagtgggaatgcccctaaacca
tacctgacgttgcagtgccacaacaagacagctcacgactttgtctttgtgggctcctcc
tccctcattgccactgcaggtctttcaacagacaacaggaacgtgtgtctgtgggacacc
ctggtaactcctgcgaacagcctggtacatgctttctgctgccacgagtccggagctacc
gtgctctcgatggcctccaggcagcagctgcttatcacaggtgggaggaaaggctggatc
agcgtactggagcttgcccacaggcaccagcgtcagagcttccaggcccacgactcgcct
gtcaaagctctggctgtcgctccgactgaggactgcttcatcagtggatcagctgagggc
aacattaagatctggagcctggccacacagtgtccgctctacaccttccccaacgaacac
gctcgccagtcgttgttcaggaacctcggcacgggcgtcatgcagatcgaggtggggccg
accaatcacatcttctcctgcggcgccgacggaaccatgaagatgagggtcctccccaac
cgcttcagtgtcatcaataacaacaacaacaaccacgggaacctcaagaacgacgtcaag
ttcatcatatag
DBGET
integrated database retrieval system
