Anoplopoma fimbria (sablefish): 129101800
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Entry
129101800 CDS
T09102
Symbol
rmi1
Name
(RefSeq) recQ-mediated genome instability protein 1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
129101800 (rmi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afb03400
]
129101800 (rmi1)
DNA repair and recombination proteins [BR:
afb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
129101800 (rmi1)
FA (Fanconi anemia) pathway
129101800 (rmi1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
DUF1908
Motif
Other DBs
NCBI-GeneID:
129101800
NCBI-ProteinID:
XP_054467702
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Position
13:complement(6056868..6065322)
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AA seq
702 aa
AA seq
DB search
MAPEIQAVVHATQTWLQSSRHIQVPFAWLEACVEWLQEEAGGAGRLSQQQINQQALDQWL
LTDLRDLSYPVLPEGLSQVQKTELSGTFCIQVDSVLDISQPAYGQMQKWRGSDCANDEVS
AVTQFTQRPWEARPTRMLLLQVTDGVQSLEAMEYQSVPALSTALRPGVKLQLQGQMVCRL
GMLLLGPNNIKVLGGEVEDLVERNNQGKVLCRTLGLPEEQQEGGEAPPAPRRGNQEVEDL
ELDDAELLASLEPHEEGERVHVGSVPDSGYGTLNETSTQSSRSSSVRSLVSTASSRTEAS
ARSYRSGLAHSNRGGSVQGHRHGNEQKISDHNMAVEDFPDEDFDNLPLDELDNVVFQQSN
NVTMQSVSGPSSSPQSSDRITGNPHRATKAQTAQFEQNTLNGAGSRLGSSNSRSTTQKRD
YQGCIKESSGQVSSPAAALQPSDELGFVTNDERDFMDDDMDCLLAEVETGLTGRSNQLQV
QQGPSRDQESFTNKTETSGSSRRLTSDSSRSVTESFSFESSHNAPQGQNYNPNTAEFDRL
SVKIDPQSDSLVPALTLTSPPFTYLCLLEEMMSKPQPHTTEIRVKAFIVTLVGKLSSNNG
LWRICATISDGSGYLDVELSDQVLTGLLGFSVAGKAVLKRDPARRGELDTGMRRCQEELV
DMCCVMTIELEPDGRKAVVTKADPVNEKVFQELEQRVRDRRK
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggcccctgagatccaggcagtggtgcatgctacccaaacctggctgcagtcctcccgg
cacatccaggtgccctttgcctggctggaagcctgcgtggagtggctgcaggaagaagca
ggaggagcaggtcgtctgtcacagcagcaaatcaaccaacaggcgctggaccagtggttg
ttgacggacctcagggacctaagctaccctgttctccccgaaggactctctcaggtccag
aagactgaactcagcgggaccttctgtatccaggttgactcggtactggacatcagtcag
cctgcatatggtcagatgcagaagtggaggggctcagattgtgccaacgacgaggtgtct
gctgtcacacagttcacccagaggccctgggaagccagaccaacccgtatgctactattg
caggtgacagatggagtccagagcttggaggccatggagtatcagtctgtccctgcactc
agcacagctctaaggcctggtgtgaagctgcagctgcaagggcagatggtctgcagactc
gggatgcttctgttggggccgaacaacatcaaggttctgggtggtgaagtggaggacctg
gtggagaggaataaccagggcaaggtgctgtgtcggacgctgggacttcctgaggagcag
caggagggcggagaggcccccccagcaccacgacgaggaaaccaggaagtggaggacctg
gagctagatgatgcagaactgttggccagtctggagccccatgaggaaggggaaagggtt
catgtggggtcggttccagacagtggctacggtacgctcaatgagacctccactcagtcc
tcgagaagctcctctgtcaggagccttgtctcaacagcctcatccagaactgaagcctct
gcccgctcttacagaagtggtttggcccacagcaacagaggtggttcggttcaaggtcat
cgccacggtaacgaacaaaagatctcagaccacaacatggcagtcgaagactttcctgat
gaagactttgacaatcttcctctggatgagttggacaatgttgtttttcaacaaagtaac
aatgttaccatgcagtctgtcagcggtcccagcagctcgccacagagcagcgacagaata
acgggaaatcctcacagggcaacaaaagcccaaactgctcagtttgaacagaacactttg
aatggcgctggctcacggcttggttctagcaactcaagatccaccacacagaaaagagac
tatcaaggctgtattaaggaatcttcagggcaggtttcttccccagcagcagctttacag
ccatcagatgagttaggctttgttactaacgatgagagggatttcatggatgacgatatg
gactgcttacttgcagaggtagaaactggtttgactggacggtcaaatcagctccaagtt
caacagggaccaagcagagaccaagagagctttaccaacaaaacagaaacttcaggctcc
agtcgtagactcaccagcgactcatcaagaagtgtaacagaaagtttttcttttgagagc
tcacacaacgcacctcaggggcaaaattataacccaaacactgcagaatttgatagacta
tctgttaaaatagacccacagagtgacagcttggttccggctctcactctgacctctcca
ccttttacatatttgtgcctgctagaggagatgatgtccaaaccacaacctcacaccaca
gagatccgagtcaaagctttcattgtgactctggtggggaaactgagcagcaacaacggc
ctctggcgcatctgcgccaccatatccgatggaagcggttacctggacgtggagctgtcc
gatcaggttttgacgggcctgctgggcttctctgtggcgggaaaggcggttttgaaacgt
gacccagcccggagaggtgagctggacactggcatgaggaggtgtcaggaggagctggtg
gacatgtgctgtgttatgaccatcgagcttgaaccagacggcagaaaagctgtggtgacc
aaggcggacccggtcaatgagaaagtattccaagagctggagcagagggtgagagacagg
agaaaatag
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