Anoplopoma fimbria (sablefish): 129101880
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Entry
129101880 CDS
T09102
Symbol
dis3l
Name
(RefSeq) LOW QUALITY PROTEIN: DIS3-like exonuclease 1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129101880 (dis3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129101880 (dis3l)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
129101880 (dis3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
Rrp44_CSD1
CSD2
Rrp44_S1
OB_HELZ2
Mito_fiss_reg
Motif
Other DBs
NCBI-GeneID:
129101880
NCBI-ProteinID:
XP_054467810
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All DBs
Position
2:complement(2280197..2305804)
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AA seq
1057 aa
AA seq
DB search
MEAVRMVKTEKVLHLRSCRGRRVRVVREHYLREAVPCYSALCAADCDQQDGKVLPGDLTH
YVVPDVGVVVDYLEILEFRELQGIVFTQTACQAVQHSKGRRQYNRLRNLIKDPRHDCVLF
ANEFQEYSYCPREKGESQEKWQTRCVYSAAVWYYNHLAGMRDVVMITEDREAVAQYSSLN
SGVYVISIQDFLQNFLPELQAAHELYISISQALQEKESEGTEKEYTEHLPAEVLEAGIKS
GRYIQGSLNVSKHRAHSEASISTEGLSNKNSDLSWGVLVCGAKNRNRAVHGDVVVVELLP
RSEWRGKDTALTEGQGEEKGGEDGDRKPMPTGRVVGILQRNWRDYVVTFPPRDGPQPQSR
NSQRILAIPWDHRIPKIRISTQQADALQDHRVVVRIDSWESTSLYPNGHSVRVLGRAGEL
ETEVQTILIENCIHVPPFSDAQLKEMPVNSPERPWTLDPAQVAERRDLRETHLVFSIDPR
GCEDVDDTLSVRSLAGGKLLELGVHIADVTHFVNEGTLTDLEARTRATTYYLADRRYDML
PSVLSADLCSLLGGVDRYAMSVMWELDAETLAVVKVWYGRTLIRSSYQLHYELAQALLNG
EPAEVPELDRLGSKERDAALARLTGALETLTRVARHLRAQRDRGGALELEGVEVRAQLDE
ARNITALVPRQPLEVHETVAECMIYANHWVARKIQEAFPHQALLRRHPPPRQEFFSQLVD
SATARGFTIDTRTNKALADSLDQAVDPQDPLVNRMLRIMATTAMSQAVYFSTGLQSTDQF
YHYGLALDRYTHFTSPIRRYADIVVHRLLTAAIEVDGGSDPGRAVTSNKELEETAHHINN
KNRAAQQAQKLSTELFQCLYFKERDPQTDQRCVADAVIYSIRDNGVLVFVPEYGVKGPVY
LKNREGEVVAVGPGGRCEWQSGAVRRHSDHITSTSSCGTSTFRLFDHITVRISVRSTHSH
ADGLNLEVVSNEPHRVPEPQPPPPGPPXSQLVQEVVRLAEEASQQAEEKKSRRAKLSREE
REFSQSKTPNLYSLLEEVRELALLDLDLVSQVCATTA
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtgaggatggtaaagacggagaaggtgctccacctgaggagctgccgcggc
cgcagggtgcgtgtggtccgggagcactacctgagggaggccgtgccgtgctacagcgcg
ctgtgtgcggcggactgcgaccagcaggatggcaaagtgctgcctggagacttgacccac
tacgtggtcccggatgtcggcgtggtggtggactacctggagatcctggagttcagggag
cttcagggcatcgtcttcacccagactgcctgccaggccgtgcagcacagcaagggccgc
aggcaatacaaccgtctacgaaacctgatcaaagacccccgacacgactgtgtgctgttc
gccaacgagtttcaggagtattcctattgtccacgagagaaaggggagagccaggagaag
tggcagaccaggtgtgtgtactctgcagcggtgtggtactataaccacctggccggtatg
agggacgtggtgatgatcacggaggaccgggaggccgtggctcagtacagcagcctcaac
tctggagtctacgtcatctccatccaggatttcttgcagaacttcttgccggagctgcag
gcggctcatgagctgtacatctccatctcccaggcgctgcaagagaaggagagcgaggga
acggagaaagagtacaccgaacatctgcccgccgaggtcctggaggctggaatcaagtct
ggacggtacattcagggctctctgaatgtcagcaagcatcgggcgcacagcgaagcttcc
atctcgacggagggtttgtccaacaagaactcagatctgagttggggcgtgttggtgtgc
ggcgctaagaaccgtaaccgggcggtgcacggcgacgtggtcgtggtggagctgctgccg
aggagcgagtggagagggaaggacacggctctgactgagggtcagggggaggagaagggg
ggggaggacggcgacaggaaaccgatgcccacgggccgtgttgtggggatcctgcagagg
aactggagggactacgtggtgactttcccccccagagacgggcctcagcctcagagcagg
aactcccagcgcatcctggcgattccctgggaccaccgcatccccaagatccgcatcagc
acccagcaggccgacgctctgcaggaccacagagttgttgtgcgcattgattcctgggaa
agcacgtcgctgtatccaaacggccacagcgttcgggttctgggccgggctggagagctg
gagacggaggtccagaccatcctcatagagaactgcatccacgtgccgcctttctccgac
gcacagctgaaggagatgccggtgaactcccccgagaggccatggacgttggacccggct
caggtggcggagcggcgtgacctgagggagactcacctggtgttcagcatcgacccgcgg
ggctgcgaggacgtggacgacacgctgtcggtacgaagcctcgccggcgggaagctgctg
gagctcggggttcacatcgcagacgtcacgcacttcgtcaacgagggaacgctgaccgac
ctggaggcccggacgagggccacgacgtattacctggccgaccgccggtacgacatgctg
ccttctgttctcagtgcggacctctgctctctgctgggaggagtcgacaggtacgccatg
agcgtgatgtgggagctcgacgcagaaaccctcgccgtggtcaaggtgtggtacggtcgc
acgctgatccgctcctcctaccagctgcactacgagctggcccaggcgctcctcaacggg
gagccggccgaggtgccggagctggacaggctcgggtccaaggagagggacgcggcgctg
gctcggctcaccggagctctggagacgctgactcgggtcgccagacacctccgggctcag
agagacagaggaggagcgctggagctggaaggggtggaggtgcgagcccagctggacgag
gcgaggaacatcacggccctggtcccccgtcagcctctggaggtccacgagaccgtggcc
gagtgcatgatctacgccaaccactgggtggcgcgcaagatccaggaggccttcccccac
caggccctgctgaggcgtcacccgcctccacggcaggagttcttcagccagctggtggac
agcgccacggcccgggggttcaccatcgacaccaggaccaacaaggctctagcggactct
ctggatcaggctgtggacccacaggacccgctggtgaacaggatgctgaggatcatggcc
accacagccatgtctcaggccgtgtacttctccactggtctccagtctacagaccagttc
taccattacggtctggctctggaccggtacactcacttcacctcaccgatccgtcgctat
gccgacatcgtggtgcaccggcttctcaccgctgccatcgaggtggacggagggtcggac
ccgggcagagcggtaaccagtaacaaagagctggaggaaacggctcatcacatcaacaac
aagaaccgggccgcccagcaggcccagaagttgtccacagagttgtttcagtgtctctac
ttcaaagagagagaccctcagacggaccagcgctgtgtggccgacgccgtcatctactcc
atcagagacaacggcgtgttggtgtttgtcccagagtacggagttaaagggccggtgtac
ctgaagaacagggagggtgaggtggtggcggtcggaccgggcggtcggtgcgagtggcag
agcggtgccgtgcggagacactcggaccacatcacctccacctccagctgcggaacctcc
accttcagactgttcgaccacatcaccgtccgtatttccgtgcgctccacgcattcccac
gccgacggtctaaacctggaggtcgtcagcaacgagccccaccgcgtcccggagccccag
ccgccgcccccagggccgccgnncagccagctggtccaggaggtggtgcgtctggccgag
gaggcgtcgcagcaggccgaggagaagaagagccggcgggccaaactctccagagaggag
cgagagttcagccagagcaagacgcccaacctgtactccctcctggaggaggtccgggag
ctggccctgctggacctggacctggtttcacaggtctgtgcaactacagcatag
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