Anoplopoma fimbria (sablefish): 129101986
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Entry
129101986 CDS
T09102
Symbol
ric1
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129101986 (ric1)
Membrane trafficking [BR:
afb04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
129101986 (ric1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
DB_JBP1
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
129101986
NCBI-ProteinID:
XP_054467855
LinkDB
All DBs
Position
14:15307841..15342420
Genome browser
AA seq
1451 aa
AA seq
DB search
MYFLTGWPRRLLSPLKSEEEPFHIQPSSQRFYFAVLSETQLSVWFSRPSVLIVSYIESAK
AAAQFGFYQKAEWKPDDSMIAVASAKGYILLFDVLGGGDGKSLYEPVYPRGSPRVRVTPG
YKEEQCAPALSLEMKKPVDLEAPITSLQSLQEDLLVCTADGYLHVLHWDGLGSNGRKAIC
LTTIPFSLDLHSARGGPSLVLEGVHIHCMEYCVTLDGFAVVLNDGRLGFITPLSNTITAD
PLQGVWAGDVNDGTCVAVNNKYRLMAFGCASGSVLVYMIDTTTGSMQLSHKLELTPKHYP
DIYNKTGPVKMIRWSPDYSVAMVTWECGGLSLWSVFGAHLICTLGEDFAYRSDGTKKEPI
KISSMSWGAEGYHLWVIPDKQERRRQEEQQQQQQQEKEEQEEMAPPPHPSMQAGILQFHF
IKSALTVNPCTSNQEQVLLHGEDRLYMTCGDPSQVNSTSDSHPHTHLHPQDGSPPHNPPN
PDSSLSQGLSTLLGHKHWHVVQIHSTYLESNWPIRFAAIDTAGQCMAVAGRRGFAHYSLY
TRKWKLFGNITQEQNMTVTGGLAWWKDFVVVACYNLTDQQEQLRLYQRSSNLDNAFASVT
KLHSDTLLLNVFRDMVILFRADCSICLYSIERRNDSPHPTASVELLQEVSMSRYIPHPAL
VVSVTLTSVHTETGITLKAPQQACMAESIMLNLAGQLIMLQRDRSGPQVREKETPTNNKK
LLPFCPPVVLAQCVENVWTTSRSNRKKRHLLEALWLSCGEAGMKVWLPLFPRDHRKPHSF
LSRRIMLPFHINIYPLAVLFEDALVLGATNETVLYDGLQGSSEPLEALFPYCTVERTSQI
YLHHILRQLLVRNLGEQALMLAQSCASLPYFPHVMELMVHVVLEEEATSREPIPDPLLPT
VAKFITEFPLFLQTIVHCARKTEYALWNYLFAAVGNPKDLFEECLMAQDLDTAASYLIIL
QNMEVPAVSRQHATLLFNTALEQGKWDLCRNMIRFLKAIGSGEMETPPPTPTTQEPSSTG
GFEFFRNRSISLSQSADAIATGKFNLQKTFSMPSGPSVKGREVECAENMYIDMMLWRHAR
HLLEQVRLRDLGCFSAQLGFELIGWLCRERNRVARVEDFVSALKRLHKDFLWPFPVIPGG
SISSPLKNGQCRTVLSTRLLKSQSADSLLNSDMDTAPPQAASSNHTWLDGLGQRPKDMDT
ASSAHSNQHSPQTHDAFLSLLTNKVEEYSVGSATDLTETSSVVDGDWTMVDENSSTLSLS
QAELEHISMELANKGPHKSQVQLRYLLHVFKEAGCLEWCVVIGLILRDANVIKQVIGFLD
SPEVPPETVQSVRNGLLAVDSWVSTDCLGYKPFLNLIQPQLQDLMDSAAEQVQPEAFQPS
SQSSKLGGSEGLGGAAVPRAEDSRGVTAPLGLALPSLEPAGSFPRPPSEDCPPEQTEEQG
EEEGAYDCTLS
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atgtattttctcaccggctggccccggaggctgctttctccgctgaagagtgaagaggag
ccgttccacatccagcccagctcccagaggttttacttcgccgtgctgtcggagacgcag
ctcagcgtctggttcagtcggcccagtgttttgatagtcagctatatcgagtctgcaaaa
gcggctgcccagtttggtttctaccagaaggcagaatggaaaccagacgactctatgatc
gctgtggcgtctgccaaaggctacatcctcttgtttgatgtgctgggtggaggggatggc
aaatccctctatgagcctgtctatccgagaggcagtcctcgtgtgagggttaccccgggt
tacaaggaggagcaatgtgcccccgctttgtctttagagatgaagaagcctgtggatctg
gaggcccctatcaccagtctgcagtcccttcaggaggacttgttggtctgtactgcagat
ggctatctccatgtgctgcactgggacgggctgggcagcaacggacgcaaggccatctgc
ctcaccacaatccccttctcgctagacctgcattctgctcgaggcggtccctctctagta
ctggaaggagtgcatatccattgtatggagtattgtgtaaccctagacggctttgctgtg
gtgctgaatgatggacgcctgggctttatcacaccactgagcaacaccatcaccgcagat
ccgctgcagggcgtctgggcaggagatgtgaatgatggcacctgtgtggccgtcaacaac
aagtacagactgatggcctttggatgtgccagcggctcagtgctggtgtacatgatagac
accacgacaggatccatgcagctctcccacaaactggagctaaccccaaaacactaccca
gacatctacaacaagacaggcccagtcaagatgatccgctggtcacctgactacagcgtt
gccatggttacatgggagtgtggcggcctatcgctgtggagtgtctttggagctcacctc
atctgtactctgggagaggactttgcgtatcgttctgatggtaccaagaaggaacctatt
aaaatcagctctatgagctggggagcagagggctaccacctctgggtgatccctgacaaa
caggagaggagaaggcaggaggagcagcagcagcagcagcagcaggagaaggaggagcag
gaggaaatggccccacctcctcacccctccatgcaggctggcatacttcagttccacttc
atcaagagtgccctgacagttaacccctgcacgagtaaccaggagcaggtgttgctccat
ggtgaagaccgcctctacatgacctgcggtgacccctcgcaggtcaacagcacctctgac
tcacacccgcacacacacttgcacccacaagatggcagcccgccgcacaatcctcccaac
cccgactcctctctctctcagggactcagcactttactgggacacaagcactggcacgtg
gtccagattcacagcacatacctagagagcaactggcctatacggtttgcagccatagac
acagcaggccagtgcatggctgtagcagggaggcggggctttgcacactactccttatac
acaaggaaatggaagctgtttggaaacatcactcaggagcagaacatgacggtgacgggc
ggtctggcttggtggaaggactttgtggtggttgcctgttacaatcttactgaccagcaa
gagcagttgaggctctatcaacgctcatccaacctggacaatgcctttgcgtctgtcact
aagctgcactcagacactctgttgctcaacgtcttcagagatatggtgatcctgttcaga
gccgactgctccatctgcctctatagcatagagaggaggaacgacagtccacaccctaca
gccagcgtggagttgttgcaggaggtgtcaatgtctcgctacatccctcatccggccctc
gtggtgtccgtcacactcacctctgtgcacacagagactggcatcacattgaaagccccg
cagcaggcctgtatggcagagagcatcatgttgaatctggctggccagttgatcatgctg
cagagggaccgttcaggaccgcaggtacgagagaaggagacgcccaccaacaacaagaag
ctgctaccattttgtcccccggtggtgctggcccagtgtgtggagaacgtgtggacaacc
tctcgctccaacaggaagaagcgccacctgctggaggccctgtggttgtcctgcggtgag
gctggcatgaaagtctggctgcctctgtttccccgagaccatcgcaagccccactccttc
ctgtccaggcgcatcatgctgcccttccacatcaacatctaccctctggctgtgctgttc
gaggatgccctggtactcggggcaaccaatgagacggtgctctatgatgggctgcaggga
tcctcggagccactggaagcgctgttcccctactgcactgtggagaggacctcccaaatc
tacctccatcacatcctgcggcagctgctggttcgcaacttgggtgaacaggctttgatg
ctggctcagtcatgtgcctccctcccctacttcccccatgtcatggagctgatggtgcat
gtcgtgctggaagaagaagcaacatcgcgggagcccatccccgaccctctgctgcccacc
gtggccaagttcatcacagagttccccctcttcctccagaccatcgttcactgtgccagg
aagacagagtacgccctgtggaactacctgtttgccgctgtgggaaaccccaaagatctg
tttgaggagtgtctgatggctcaagacctggacacagcagcctcgtatctaattatactg
cagaacatggaggttccagcagtgagcagacaacacgccactctgcttttcaacacagcc
cttgagcaaggcaagtgggacctctgcaggaacatgatccgattcctcaaagccatcggc
tctggagagatggagactccgcccccaacacccaccactcaggaacccagctcaactggc
ggttttgagttcttcagaaaccgcagcatcagtttatcacagtcagcagacgccatcgct
acgggcaagttcaacttgcagaagaccttcagtatgccttctggaccctctgttaaaggt
cgggaggtggagtgtgcagagaacatgtacatcgacatgatgctctggcgccacgcccgc
cacctcctggagcaggtacgccttcgcgacctcggttgcttctctgcacagctgggcttc
gaactcatcggctggttgtgtcgcgaacgaaaccgggtggctcgcgttgaggatttcgtt
tctgcgttgaagagactccataaagattttctctggcctttccctgttattcctggagga
agcatcagctcgcctctgaagaacggacagtgtcgcacagtgctgagcacgcgtctgttg
aagtcgcagtcggctgacagcctgttgaacagcgacatggacacagcgccccctcaggca
gcttcctccaaccacacctggctggacgggctcgggcagaggcccaaagacatggacacg
gcctcgtccgctcattccaaccagcactcaccacagacgcacgacgctttcctgtctctg
ctcaccaacaaagtggaagagtacagtgtcggctcggccacagacttgacggagaccagc
tcggtggtggatggtgattggacgatggtggatgagaactcctccactctgagcctgagc
caggccgagttggagcacatctccatggagctggccaacaaaggcccgcacaagtcacag
gtgcagctcaggtatctccttcatgtgttcaaggaggcaggctgtctggagtggtgtgta
gtgattggtttgatccttcgggacgccaacgtcataaagcaggtgatcggcttcctggac
agccccgaggttcccccagaaactgtgcagagtgtccgaaacggcttattggctgtggac
tcatgggtctccactgactgcctcggatacaaaccctttctcaacctgatccagccacag
ctacaggatctgatggactcagcggctgagcaggtgcagcctgaggccttccaacccagc
agccagagctccaagctaggcggctctgaagggctgggaggtgctgcggtaccacgggcg
gaggacagtagaggagttaccgctccgctgggcctggccctgccctccctggaacccgcc
ggaagttttccccgtcccccctctgaggattgtcctcctgaacagacagaggagcagggg
gaggaggagggcgcctatgactgcaccttgtcctga
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integrated database retrieval system
