Anoplopoma fimbria (sablefish): 129102011
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Entry
129102011 CDS
T09102
Symbol
ubc
Name
(RefSeq) polyubiquitin-C
KO
K08770
ubiquitin B/C
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03320
PPAR signaling pathway
afb04120
Ubiquitin mediated proteolysis
afb04137
Mitophagy - animal
afb04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129102011 (ubc)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129102011 (ubc)
04137 Mitophagy - animal
129102011 (ubc)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
129102011 (ubc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129102011 (ubc)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afb04147
]
129102011 (ubc)
Ubiquitin system [BR:
afb04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
129102011 (ubc)
Exosome [BR:
afb04147
]
Exosomal proteins
Exosomal proteins of breast milk
129102011 (ubc)
Exosomal proteins of other body fluids (saliva and urine)
129102011 (ubc)
Exosomal proteins of colorectal cancer cells
129102011 (ubc)
Exosomal proteins of bladder cancer cells
129102011 (ubc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
129102011
NCBI-ProteinID:
XP_054467904
LinkDB
All DBs
Position
14
Genome browser
AA seq
381 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGN
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaagaccctgaccgggaagaccatcactttggaggtggagcccagc
gactccattgagaatgtcaaggccaagatccaggacaaggagggcatcccccccgaccag
cagcgtctgatctttgctggaaagcaactcgaggacggccgcaccctctctgactacaac
atccagaaggagtccaccctccacctggtcctccgtctccgtggaggcatgcagatcttt
gtcaagaccctgaccggtaagaccatcaccctggaggtggagcctagtgatagcattgag
aacgtcaaggccaagatccaggacaaggagggcatccccccagaccagcagcgtctgatc
tttgctggcaaacagctggaagacggccgcaccctctctgactacaacatccagaaggag
tccaccctccacctggtcctccgtctccgtggaggcatgcagatctttgtgaagaccctg
accgggaagaccatcaccctggaggtggagcccagcgactccattgagaacgtcaaggcc
aagatccaagacaaggagggcatccccccagaccagcagcgtctgatctttgctggaaag
caactcgaggacggccgcaccctctctgactacaacatccagaaggagtccaccctccat
cttgtgctccgtctccgtggaggcatgcagatctttgtcaagaccctgaccgggaagacc
atcaccctggaggtggagcccagcgactccattgagaacgtcaaggccaagatccaagac
aaggagggcatccccccagaccagcagcgtctgatctttgctggcaaacagctggaagat
ggccgcaccctctctgactacaacatccagaaggagtccaccctccacctggtcctccgt
ctccgtggaggcatgcagatctttgtgaagaccctgaccgggaagaccatcaccctggag
gtggagcccagcgactccattgagaatgtgaaggccaagatccaggacaaggagggcatc
cccccagaccagcagcgtctgatctttgctggaaagcagcttgaagacggccgcaccctc
tctgactacaacatccagaaggagtccaccctccacctggtcctccgtctccgtggagga
aactga
DBGET
integrated database retrieval system
