Anoplopoma fimbria (sablefish): 129102013
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Entry
129102013 CDS
T09102
Symbol
sec31a
Name
(RefSeq) protein transport protein Sec31A
KO
K14005
protein transport protein SEC31
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129102013 (sec31a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129102013 (sec31a)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
afb02044
]
129102013 (sec31a)
Membrane trafficking [BR:
afb04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
129102013 (sec31a)
Secretion system [BR:
afb02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
129102013 (sec31a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_2nd
TPR_Sec16
Beta-prop_DCAF12
Beta-prop_HPS5
TPR_GEMI5
Beta-prop_WDR35_TULP_N
Prp18
Motif
Other DBs
NCBI-GeneID:
129102013
NCBI-ProteinID:
XP_054467907
LinkDB
All DBs
Position
14:complement(2794935..2814213)
Genome browser
AA seq
1474 aa
AA seq
DB search
MKLKEINRTAIQSWSPAQHHPIYLATGTSAQQLDASFSTNASLEFFELDLTEPSLDMKSC
GSLSTSHRYHKLVWGPYGMDEQGNPSGVLIAGGENGDVILYDPAKIMAGETDVIIAESNK
HTGPVRALDVNPFQTNLVASGGNESEIYIWDMNNFGSPMTPGPKTQPLEDISCVSWNRQV
QHILASASPSGRASVWDLRKNDLIIKVSDHSNRMHCSGLAWNPEVATQLVLSSEDDRMPV
IQMWDLRFATSPFKILENHTRGVLSIDWSLADPELLLSCGKDNRILCWNPNTAEVLYELP
TSSQWCFDIQWCPRNPAVLSAASFDGHIDIYSIMGGTNQAQSQRQADQISNSFGNMDPFG
TGQTLPPLQMPQTAAPPTTVNPLKKPPKWIRRPVGASFAFGGKLVSLENIKPNPQQPQQS
PSHVVHVSQVVTETAFLKRSDQLQATLSAGSFVGFCQEKIDAAENEFEKTLWSFLKANFE
SDIRSKYLELLGYNKEELALKISAALEEKPAEPPQVEVPAPISLQPLPELSILPPADTPE
AAFDMIAAAAVPLSDTPEAAFNMIAAAAVPLSETPEAAFNMIAAAAVPLSETPEAAFNMI
AAAAVPLSDTPEAAFDMIAAAAVPLSETPEAAFDLIAAAVVPPADNPEDAFDMIAAANLE
PAATMELDLAPDSGTEEPAEAEADQEDAPPSEPLANGEQVLPEEEAEEEEIPLEEEEEET
AAPVEEEPSPPEASAPVEEPTKDPAPAPAPTPAQTEGVSLSISQDVDGLITQALLTGDFE
GAVELCLHDNRMADSIILAIAGGSDLLEKTQKKYFTKTHSKITKLISAVVMKDWHDILKT
CDLQNWKEALAAVMTYAQPEEFSSLCDLLGGRLEAAEDAQLQAQACLCYICAGNVEKLVS
CWTRAQDGHSPLSLQDLVEKVVVLRRAVEQTQRSGATAIGVLLAEKMSQYANLLASQGSL
STAITYLPDNTNQVSIQQLRDRLSRALGQQAAPAPVAPVAPVQTQRAQTQIPAPTQTQAQ
PRHQFTPIQPAMVPQPTSAAPVAMLTPASSAPAQPQYYQPVRATSTVTSWSNQTPTALPN
VPPPPLQVGRASEQQAEPSNSMYGMPPSCTAAPPPASSTPAYMYSHQYQPYPQVNQYPPG
AGGAPIYQPLQYSSSSSSAAPPPAEPPGFLSQYTQPTSPVYPGHPPISQCPSSSPPSHPP
FFPNSSSSSSFSAPPSSGASFQHGGPGSPVSYMHPPPPFGFSGPQNGWNDPPALNRASKK
KPAPMNYTPPTPITAPIMAPLGSDPQAQPVPSGAPQAMGQGPHGGQVPYSGMHQQHQQHQ
QHQQQQLSPPPMNPAMPKTSMEGAPGAPTGDVIQSIPAEKIMKKPIPEEHLVLKNTFEGL
IQKCLAVATDPQTKRKLDDANKRLEALYDKLREQTLSPAIVGGLHNIARSIETRSYTEGL
NIHTHIVSNSNFSETSAFMPVLKVVLTQANKLGV
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttaaagagatcaaccgcacagccatccagagctggagccctgcacagcaccac
cccatctaccttgcaacaggaacatcagcccagcagctggatgcctccttcagcaccaat
gcctccttggagttcttcgagctggacttgactgagccatctctggacatgaagtcatgt
ggcagcctctccacctctcacagataccacaaactggtttggggtccatatggaatggat
gagcaaggcaacccgtctggggttcttattgcaggaggcgagaacggcgacgtcatcctg
tacgaccccgcaaagatcatggccggagagaccgacgtgatcattgctgagagtaacaag
cacacggggccagtgagagccctcgacgtcaacccgttccagacaaacctggttgcatca
ggtgggaatgagtcagaaatctatatctgggacatgaataactttggctctccaatgaca
ccgggacctaaaacacagcctctggaggacatcagctgtgtgtcgtggaacagacaggtc
caacacatcctggcctcggccagtccgagtggccgagcctcagtgtgggacctccgcaag
aatgacctcatcattaaagtcagcgaccacagcaacagaatgcattgctccggtctggct
tggaacccagaagtcgccactcagctggtcttgtcgtcggaggacgatcggatgccggtc
atccagatgtgggacttacgttttgctacctctcctttcaagattttagagaaccacaca
cgaggtgtcctttccatcgactggagcttggctgatccagagctgctcctgagctgtggg
aaagacaacaggattctgtgctggaatccaaacacagcagaggtgctgtacgagctgccc
accagcagccagtggtgctttgacatccagtggtgccccaggaaccccgcggtgctgtcg
gccgcaagctttgacggacacatcgacatctattccatcatgggaggaaccaaccaggcg
cagagccagagacaggccgaccagattagcaactcgtttgggaacatggatccgtttggg
accggacaaactttacccccgctgcagatgccccagactgctgccccgccaacgacagtc
aaccctctgaagaagccgccgaagtggatccgccgacccgtcggagcctcgtttgctttc
ggtgggaagctggtgtctctggagaacatcaagccgaaccctcagcagcctcagcagtcc
ccttctcacgtcgtacacgtcagccaggtcgtcacggaaacggcctttctgaagcgctcc
gatcagctgcaggctactctgagtgccggcagcttcgtgggtttctgccaggagaagatc
gacgcagctgaaaatgagtttgaaaagactctctggtctttcctcaaggctaattttgaa
agtgatatccgcagcaaatacctggaacttctggggtataacaaagaggagctagcctta
aagatttcagcagctctagaggaaaagcctgctgaacctccacaggtggaggtgcccgct
ccaatcagcctgcagcctttaccagaactcagcatcctgccgcccgctgacactccagag
gcggcgttcgatatgatcgctgcagcagccgtgccgctttctgacactcctgaagcagcg
ttcaatatgatcgctgctgcagccgtgccgctttctgaaactcctgaagcagcgttcaat
atgatcgctgctgcagccgtgccgctttctgaaactcctgaagcagcgttcaatatgatc
gctgcagcagccgtgccgctttctgacactccagaggcggcgttcgatatgatcgctgca
gcagccgtgccgctttctgaaactcccgaagcagcttttgatttgatcgctgcagcagtt
gtgccgcctgctgacaatcctgaagatgctttcgatatgatcgctgcagcaaaccttgag
ccagcagccacgatggaactggacttggctcctgactccgggactgaagagccagcagaa
gcagaagcagatcaagaagacgctcctccaagcgaaccactagcaaatggggagcaggtt
ctaccggaggaggaagcagaggaagaggagatccccttggaggaggaggaggaggagacg
gcagcaccggtggaggaggagcccagtcctcctgaggcctcggctccagtcgaggagcca
acgaaggatccagctccagctcctgctccaacgccggcacaaacagaaggagtcagcctc
agcatcagtcaagacgtggacgggctcatcacacaggccctgctgaccggagactttgag
ggagctgtggagctctgtctccatgacaaccggatggcagacagcatcatcctggccatc
gccggagggtccgaccttctggagaaaacccagaagaagtactttacaaagacgcacagc
aagataaccaagctgatcagtgcagtggtgatgaaagactggcatgacatcctgaagacg
tgcgacctgcagaactggaaggaggctctggctgctgtcatgacctacgctcagcctgag
gagttctcttccctctgtgaccttctcggaggcagactggaggcagcagaggacgcccag
ctgcaagcccaggcctgtctgtgttacatctgtgctggaaatgtggagaaacttgtgtct
tgctggaccagagcccaagacggacacagtccactctccctccaggacctggtggagaag
gtggtggtgctgcggcgtgcagtggaacagacccagcgctccggtgccactgctatcggc
gtcctgctggctgagaagatgagccagtacgccaacctgctggcctctcagggcagtctg
tccaccgccatcacctacctgcctgacaacaccaaccaggtttccatacagcagcttcgt
gaccgtctcagtcgagctctcgggcagcaggcggcgccggctcctgtagctcctgtagct
ccggtacaaacccagagagctcagactcagataccagccccgactcagactcaggctcaa
ccccggcatcagttcactccaatccagcccgccatggtgcctcagcccacttcagcagct
ccagttgccatgctgacacctgcttcctccgccccggcacagccgcagtattaccaacca
gtgagggctacgtccactgtcacctcctggagtaaccagactcccacagccctccccaat
gtccctcctcctcctctccaagtaggcagagcctcagagcagcaggcggagccttcaaac
tccatgtacgggatgcctccgtcctgcacagctgctcctcctccagcctcctccactcct
gcatacatgtactcccatcagtaccagccatacccccaggtcaaccagtaccctcctgga
gctgggggggctcctatctatcagcctcttcagtactcctcctcctcctcctctgctgct
cctcctcctgcagagccaccaggctttctctctcagtacacacagcccacatctccggtc
tatcctgggcatcctcccatcagccagtgcccgtcctcctctcctccctcccatcctcct
ttctttccgaactcctcttcctcctcctccttttctgctcctccgtcctccggagcgtct
ttccagcatggcgggccgggatctcctgtgtcgtacatgcatcctcctccgccgttcgga
ttctcagggcctcagaatggctggaatgaccctccggccctgaacagagcttcaaagaag
aagccggctccgatgaactacacccctcccacccccatcactgctcccatcatggctcca
ctgggttctgaccctcaggcccagccggtcccctctggggcccctcaggccatgggccag
gggccacacggaggccaggttccctactcaggcatgcaccagcagcaccaacagcaccag
cagcaccaacagcagcagctttcccctccacccatgaaccctgcaatgcccaagaccagt
atggagggggccccaggagctcccactggagatgttatacagtccatccctgctgagaag
atcatgaagaagccgatccccgaggagcacctggtcctgaagaacacgtttgaggggctc
atccagaagtgcttggctgtagccaccgaccctcaaaccaagaggaagctcgatgacgcc
aacaaacgtctggaggcgctctatgacaaactcagagagcagacgctctctccggccatc
gtaggaggacttcacaacatagcccggagtatagagacccgatcctacacggagggcctc
aacatccacacccacatagtcagcaacagcaacttcagcgagacgtcggcgttcatgccc
gtcctcaaggtggtgctgacacaagccaacaaactcggggtgtga
DBGET
integrated database retrieval system
