Anoplopoma fimbria (sablefish): 129102017
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Entry
129102017 CDS
T09102
Symbol
stxbp1a
Name
(RefSeq) syntaxin-binding protein 1a isoform X1
KO
K15292
syntaxin-binding protein 1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129102017 (stxbp1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afb04147
]
129102017 (stxbp1a)
Membrane trafficking [BR:
afb04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
129102017 (stxbp1a)
SNARE
SNARE associated proteins
Syntaxin-binding proteins
129102017 (stxbp1a)
Exosome [BR:
afb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129102017 (stxbp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
SGT1
YlbD_coat
FRB_dom
Motif
Other DBs
NCBI-GeneID:
129102017
NCBI-ProteinID:
XP_054467911
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All DBs
Position
14:complement(22108116..22142994)
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AA seq
603 aa
AA seq
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MAPIGLKAVVGEKIMNDVIKKVKKKGEWKALIVDQLSMRMLSSCCKMTDIMTEGITIVED
ILKRREPLPSLEAIYLITPTEKSVHTLIADFKDPHSAKYKAAHVFFTDSCPDPLFNELVK
SRASKTIKTLTEINIAFLPYESQVYSLDNPDAFHSFYSPHKTQLKNPVMERLAEQLATLC
ATLKEYPAVRYRGEYKDNATLAQLVQDKLDAYKADDPTMGEGPDKARSQLIILDRAFDPV
SPVLHELTFQAMGYDLLPIENDVYKYESSGVGDSREKEVLLHEDDDLWVSLRHKHIAEVS
QEVTRQLKDFSASKRMNTGEKTTMRDLSQMLKKMPQYQKELSKYSTHLQLAEDCMKHYQG
TVDKLCRVEQDLAMGTDAEGEKIKDPMRAIVPILLDANVTTYDKIRIILLYIFLKNGITE
ENLNKLIQHAQIPPEDSEIITNMAHLGVPIVTDSTLRRGKKLDRKERVSEQTYQLSRWTP
LVKDIMEDAIDDKLDTKHYPYISTRSSASFSTTAVSARYGHWHKNKTPGEYRTGPRVMVF
IIGGASFSEMRCAYEVTQANGKWEAVIGATHIITPTKFLSDLQHPDFRESTRVSFEDAEP
TAE
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggcacctatcggattaaaggcggtggtcggtgaaaagattatgaatgatgtaatcaag
aaggtgaagaagaagggagaatggaaggcactgatcgtggaccagctgagcatgaggatg
ttgtcgtcctgctgcaagatgacagacatcatgacagagggcatcaccatcgtggaggac
atcctgaagcgacgagagcctcttcccagcctggaggccatttacctgattacacccaca
gagaagtctgtccacacccttatcgcagacttcaaagaccctcattcagctaaatacaag
gcagcccatgttttcttcactgactcctgccccgatcctctcttcaacgagctggtgaag
agccgcgcttccaaaaccatcaagactctgacggagatcaacatcgctttcttgccctac
gagtctcaggtttactctctggacaatcccgatgccttccacagtttctacagcccccat
aagacccagctgaagaacccggtgatggagaggctggctgagcagctggctacgctctgt
gccaccctgaaggagtaccctgctgtcagataccgaggcgagtacaaggacaatgccaca
ctggcccaactggttcaagacaaactggacgcctacaaggctgatgaccccactatggga
gagggtccagataaggctcgctcacagctgatcatcctggaccgggcgtttgaccccgtc
tctcccgttctgcatgagctcaccttccaggccatgggctacgacctgctgcccatcgaa
aatgacgtctataagtacgagagcagtggcgttggagattctcgtgagaaggaggttctg
ctgcatgaagacgatgacctgtgggtgagcctgagacacaaacacatagcggaggtttcc
caggaagtgacccgtcagctgaaggacttttctgccagcaagaggatgaacactggggag
aagaccactatgagggatctgtcccagatgctgaagaagatgcctcagtaccaaaaggag
ctcagcaagtactccactcatctgcagctggctgaggactgcatgaagcattaccaggga
acagtggacaagctgtgccgtgtggaacaggatctggctatgggcacggacgctgaggga
gagaagatcaaagaccccatgagggctatcgtgcccatcctgctggacgccaacgtcacc
acgtacgacaagatccgcatcatcctgctctacattttcctcaagaatggcatcacggag
gagaacctgaacaagctgatccaacacgctcagattccccctgaggacagtgagatcatc
accaacatggctcacctgggcgtccccatcgtcacagattccaccctccgccgaggaaag
aagctggacaggaaggagcgtgtgagtgagcagacctatcagctgtcccgctggacacca
ctggtcaaggacatcatggaggatgctattgatgataagctggacaccaagcactacccc
tacatctctacccgctcctctgcctccttcagcaccactgcagtcagtgctcggtacggc
cactggcacaagaataagactcctggagagtaccgcactgggccacgtgtcatggtcttc
atcattggcggcgcttccttcagcgagatgcgctgcgcctatgaggtcacacaggccaat
gggaagtgggaggccgtcattggtgccacccacataatcacccccaccaaattcttatcg
gacctgcagcaccccgacttccgagagtccactagggtgtcctttgaggacgcagaaccc
acagccgagtga
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