Anoplopoma fimbria (sablefish): 129102045
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Entry
129102045 CDS
T09102
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03082
ATP-dependent chromatin remodeling
afb03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129102045
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
129102045
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
afb01009
]
129102045
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afb03021
]
129102045
03036 Chromosome and associated proteins [BR:
afb03036
]
129102045
Protein phosphatases and associated proteins [BR:
afb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129102045
Transcription machinery [BR:
afb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129102045
SWI/SNF complex
129102045
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129102045
PBAF complex
129102045
SWI/SNF complex
129102045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
129102045
NCBI-ProteinID:
XP_054467953
LinkDB
All DBs
Position
14:8891891..8913394
Genome browser
AA seq
368 aa
AA seq
DB search
MQLALSKTFGQKPVKFQLEQDGDFYMVGSEVGNYLRMFRGSLYKRYPSLWRRLASVEERK
KIVASSHATSVTLLKASECEEIFEGNDEKYKAVSISTEPPAYLREQKAKRSSQWVPTLPN
SSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENAAQVEALVPIRLDMEIDG
QKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQIESYPTDSILEEQ
ADQRVIIKLNIHVGNISLVDQFEWDMSERENSPESFALKLCSELGLGGEFVTTIAYSIRG
QLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRMRR
LANTAPSW
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcaattggctcttagtaaaacgtttggccagaaaccagttaaatttcaattagagcaa
gatggagacttttacatggttggatcagaggttggaaactacctgcgcatgttcagaggc
tctctgtacaaaagatatccatctttatggaggaggctggcttcggtggaggagaggaag
aaaattgtagcgtcatcacatgccactagtgtaactctgctgaaggcttcagaatgtgaa
gagatcttcgaggggaatgatgagaaatacaaggcggtgtccatcagcacagagccccca
gcttacctcagggagcagaaagcaaagaggagcagtcagtgggtccccacgctgcccaac
agctctcaccatctcgatgctgtgccttgctccaccaccatcaaccgcaatcgaatgggc
cgtgacaagaaaaggaccttccccctgtgctttgatgaccatgaccctgcagtgatccat
gagaacgcagcccaggtagaggcgctcgttcccattcgtctcgacatggagattgacgga
cagaaactgcgagatgccttcacgtggaacatgaatgagaaattgatgactccagagatg
tttgccgagattttatgtgatgacctggacctgaatcctctggcctttgtccctgccatt
gcctcagccattcgtcagcagattgagtcctaccccactgacagcatactggaagagcag
gcagaccagagagtcatcatcaagctaaacatccatgtggggaacatttctctggtggac
cagtttgagtgggacatgtctgagagagaaaactcgccggagtcatttgcgctgaagctg
tgctctgagctaggtctggggggagagtttgtcaccactatagcctacagcattcgcggt
cagctcagctggcaccagaggacctatgccttcagtgagaacccactcccgacagtagag
atcgccatccgcaacacaggtgatgcagaccagtggtgccccttgctggagactctcaca
gatgccgaaatggagaagaagatacgagaccaagacaggaacacaaggcgtatgagacga
ctggccaacaccgctccctcctggtag
DBGET
integrated database retrieval system
