Anoplopoma fimbria (sablefish): 129102047
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Entry
129102047 CDS
T09102
Symbol
kars1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
129102047 (kars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
afb01007
]
129102047 (kars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afb03016
]
129102047 (kars1)
Enzymes [BR:
afb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
129102047 (kars1)
Amino acid related enzymes [BR:
afb01007
]
Aminoacyl-tRNA synthetase
Class II (A)
129102047 (kars1)
Transfer RNA biogenesis [BR:
afb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
129102047 (kars1)
Prokaryotic type
Other AARSs
129102047 (kars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF374
DUF6584
Motif
Other DBs
NCBI-GeneID:
129102047
NCBI-ProteinID:
XP_054467958
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All DBs
Position
2:complement(18659389..18667048)
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AA seq
613 aa
AA seq
DB search
MLCLLRAARQQLCQALGVRGQWLKYAQPCTAAVSAQMYGIRWRGDKSELKRRMKADKKVA
EKEAKVKEQLDQKKESNDQGAENACGQDEETLDPNQYFKIRTQAIQELKGTAEDPYPHKY
HVDLSLTEFIKKYSDLQPGDQLTDVVFSVSGRVHAKRASGAKLIFYDLRGEGVKLQVMAN
SRTYKSEEAFVAINNKLRRGDIIGVRGNPGKTKKGELSIIPIEMTLLSPCLHMLPHLHFG
LKDKETRFRQRYLDLILNDYVRQKFITRSKIITYLRSFLDQLGFLEIETPMMNVIPGGAV
ARPFVTYHNELDMNLYMRIAPELYHKMLVVGGMDRVYEIGRQFRNEGIDLTHNPEFTTCE
FYMAYADYYDLMEITEKLLSGMVKHITGGYKVTYHPEGPEGPAHEIDFTPPFRRVSMTHD
LEKIMGVKFPPTDSYDSDETRKFFDDLCAQKGVECPPPRTTARLLDKLVGDFLEVTCINP
TFICEHPQIMSPLAKWHRTQKGLTERFELFVMKKEICNAYTELNDPIRQRELFEQQAMAK
AEGDDEAMGVDETFCTALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPDDNK
TSAPTAPIEGTSV
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgtctgctcagggcggccaggcagcagctgtgccaagccttgggggtcagggga
cagtggttaaaatatgcacagccatgtacagctgcagtctcagctcaaatgtacgggatc
cgttggagaggtgacaaaagtgagctgaagagacgaatgaaagctgataagaaggtggca
gagaaagaagcaaaggtcaaagagcagttggaccaaaagaaagaatccaatgaccaagga
gcggaaaatgcctgtgggcaggatgaggagacgcttgacccaaatcaatacttcaagatc
cgcacccaggcaatccaggaactgaagggcacagcagaggacccgtaccctcacaagtat
catgtggacctgtcactcacagagttcatcaagaaatacagcgatcttcagcctggagat
cagctgactgatgttgttttcagtgtttcaggccgtgtccacgccaagagggcctctggt
gctaagctgattttctacgacctgcgaggtgaaggcgtcaagttgcaagtcatggcgaac
tcaaggacctacaagtctgaggaggcctttgtggctatcaacaacaaactgcgccgcgga
gatatcatcggcgtccgtggtaacccaggaaagacaaaaaagggggagttgagcatcatt
cccatcgagatgactctactgtcgccatgtttgcacatgttgccccacctccactttggc
ctcaaagacaaggaaacgcgattccgccagcgctacttggatctgattctcaacgactac
gtgaggcaaaagttcataactcgctccaaaatcatcacatacctgcgcagtttcctggac
caactgggctttttggagattgagacaccgatgatgaacgtcattcctggtggagcagtg
gcccgtccatttgttacttaccacaatgaactggacatgaacctgtacatgaggatcgca
cctgagctctaccacaagatgcttgtggttggaggaatggacagagtgtatgagatcggc
cgtcagttcaggaatgaaggcatcgatcttactcacaatccagagttcaccacctgtgaa
ttctacatggcatatgccgattactatgacttgatggaaatcactgagaaacttctctca
gggatggtgaaacacatcactggaggatacaaggtgacttatcaccctgaaggcccggag
ggaccggcccatgagattgacttcactccgcctttcagaagagtgagcatgacacacgac
ctggagaagattatgggagtgaagttcccgcctactgacagctacgacagtgatgagacg
cgtaaattctttgacgacctgtgtgcacagaaaggagttgaatgtcctccacccagaacc
actgcccgcctccttgacaagttggttggagatttccttgaggtcacctgtattaacccc
acattcatctgtgaacatccccaaatcatgagtcccttagcaaaatggcacagaacacag
aaaggcctaacggagcgttttgagctctttgtgatgaagaaggaaatctgcaatgcttac
actgagttgaatgatccgattagacagagggagcttttcgagcagcaagccatggccaaa
gcagagggcgatgatgaagccatgggcgttgatgagaccttctgcacagctctggaatat
ggactgccaccaactgccggctggggaatgggcatcgatcgtctcacaatgttcctcact
gactccaacaacatcaaggaggtgctactcttcccagctatgaagcctgacgacaacaag
acatcagcgcccacagcgcccatagagggcacctccgtctaa
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