KEGG   Anoplopoma fimbria (sablefish): 129102048
Entry
129102048         CDS       T09102                                 
Symbol
pdlim5b
Name
(RefSeq) PDZ and LIM domain protein 5b
  KO
K19867  PDZ and LIM domain protein 5/6/7
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:afb00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    129102048 (pdlim5b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:afb04990]
    129102048 (pdlim5b)
Domain-containing proteins not elsewhere classified [BR:afb04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   129102048 (pdlim5b)
SSDB
Motif
Pfam: LIM PDZ DUF4749 LIM_FHL2-3_N PDZ_6 PDZ_2
Other DBs
NCBI-GeneID: 129102048
NCBI-ProteinID: XP_054467955
LinkDB
Position
14:complement(15759254..15797011)
AA seq 610 aa
MSSSYSVSLAGPAPWGFRLQGGKDFCLPLTISRLTDDGKAARAKMSVGDIILSINGISTD
GMNHLEAQNKIKACTGNLSLTLQRPSSAPKDGVPKDEHQEIIKPVPITHPAPSTAYTKPL
SQPGPAYNKTARPFGGDGIGVTASSPAAPSIPSQSSAFKPAAPSQPIQPPFLLKSSLPVT
DSPPANSAPRPSPARHTFTSPSASSSSSNSSSPARVTAPSSQPNVPQPSVYNTPINLYSN
NNACEVVMGQRRGLLESQGLSEPFNGKPNVEPEDHASPLSDSSKKRLIEDTEDWHPRTGT
SQSRSFRILAQLTGTEKEQDPENSGKNEAVDKTTPAVHTSPAAKTFTKSAASPRNGNAVP
ASTFKSPAAQNKPSFQPGGPTGFPKGGAAPSFGKVTNPAPKGPDRPTPQPHPQDLNSVVQ
RAEHIPAGKRTPMCNKCNNVIRGPFLVAMGMSWHPEEFDCAHCHSSLADRGFVEEKGQVY
CERCYEQFLAPTCGRCHQKILGEVMNALKQTWHVSCFVCFSCHQPIRGNTFHMEDGQPYC
EKDYYNLFGASCHGCDFPIEAGDKFLDALGFTWHDTCFVCAVCSASLEGQAFFSKKDKAL
CKKHAHTVNI
NT seq 1833 nt   +upstreamnt  +downstreamnt
atgagcagcagctacagtgtctccctggctggccccgccccctggggcttcagactgcaa
ggagggaaggacttctgtctgcccctcaccatctcacggctgactgatgatggcaaagca
gccagagccaagatgagtgtcggagacatcattctgtccattaatggcatttccacggat
ggcatgaatcacctagaggcccagaacaagattaaggcctgcacaggcaatctcagcctc
actctacagagaccctccagtgcccctaaagatggagttcctaaggacgaacatcaagaa
atcattaagcctgtcccaatcactcatcccgccccgagcactgcatacaccaagccattg
agtcagccaggtcctgcatacaacaagacagcccggccatttgggggggacggcattggg
gtcacagcttcctccccggctgctccctccattccttcacagtcatctgctttcaagcca
gctgccccttctcagccaatacagcctccatttctgctgaagtcaagcctccctgtcacg
gactcccctccggccaactcagctcccaggcccagccctgctcgccacaccttcacctcc
ccgtctgcctcttcctcctcatctaactcctcctctccagccagagtgacagccccctct
tcccaacctaatgtcccacagccctccgtctataacacacctatcaacctctactccaac
aacaatgcttgtgaggtggtcatgggacagaggcgcggccttttggagagccaggggctg
tcagagcccttcaatgggaaaccaaatgtggagcctgaggatcatgcatccccactgagc
gattccagcaagaagcgtctgattgaggacaccgaggactggcacccgcgaaccggcacc
tcccagtccagatctttccgtatcctggctcagctcaccggcactgaaaaagagcaagat
ccagagaacagtggaaagaatgaggcagttgacaaaaccactcccgctgtgcacacctcg
cctgcagcaaaaacatttaccaaatctgcagcatcacccaggaatggcaacgccgtccct
gcttccacgttcaagagcccagcggcccagaacaagccttccttccagcctggaggtcca
acaggttttcctaagggtggagcagctccttcatttggtaaggttaccaaccctgctcct
aaaggtccggatcggcccaccccacagcctcatccacaggacctcaactccgtggtgcag
cgtgccgagcacatcccagccgggaaacgcaccccgatgtgcaacaagtgcaacaatgtc
atcaggggcccattcctcgtggccatgggcatgtcatggcaccccgaggaattcgactgt
gctcactgccactcctccctggcagaccgtggatttgtggaggagaagggccaagtgtac
tgcgaacgttgctacgagcagttcttagctcccacctgcggccgctgccaccagaagatt
ctgggggaagtcatgaatgccctgaaacagacctggcatgtgtcctgtttcgtctgtttc
tcctgccatcagccaatcaggggcaacacatttcacatggaggatggacagccatactgt
gagaaagactactacaacctgtttggagccagttgccacggctgtgacttccccatcgag
gccggggacaagttcctggatgctctaggattcacctggcatgacacctgctttgtgtgt
gcggtctgctctgctagtctggaaggtcaggcgttcttctccaaaaaagacaaggctttg
tgcaagaaacatgcccacactgttaacatctga

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