Anoplopoma fimbria (sablefish): 129102095
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Entry
129102095 CDS
T09102
Symbol
fubp3
Name
(RefSeq) far upstream element-binding protein 3 isoform X1
KO
K13210
far upstream element-binding protein
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129102095 (fubp3)
03041 Spliceosome [BR:
afb03041
]
129102095 (fubp3)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
129102095 (fubp3)
Spliceosome [BR:
afb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
129102095 (fubp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
MecA
Motif
Other DBs
NCBI-GeneID:
129102095
NCBI-ProteinID:
XP_054468035
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All DBs
Position
14:14724780..14743583
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AA seq
558 aa
AA seq
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MMMMAELVQGQASVAQPGTKDDFADTIRRVRQMAAKMGGDQMPNMNSSPPVIDPSLYGFG
GQKRSLDNGVGNHLGAMVHQRALATEDYKVPDKMVGFIIGKGGEQISRIQLESGCKIQIA
SDSGGMLDRPCTLTGSPENIDQAKRLLSEIVEQCRYGPGFHSDMDGSSIQQILIPANKVG
LVIGKGGETIKQLQERTGVQMIMIQDDPMPTGADKPLRITGDPHKVQQARELVVKLIRDK
DQGDFRVGRADFGSKMGGSSLDVVVPRFAVGIIIGRNGEMIKKIQNDAGVRIQFKQDDGV
SPDRIAQVMGQPDHCHHAVHLINELVQTAQERDGFGGVIGRRGRSDCNMGSSGGLQEVTY
AVPADKCGLVIGKGGETIKNIKEQSRAHVELQRNPPPNTDPNVRIFSIRGTPQQLEKARQ
LIDERIGGPGMGGNSSFGMNPYNQGPTTPPQHGAQTFMTGGWGTTFQIWQPQGQQEHSHN
GSQTSQMDWEQYYKKLGQQNQAQSTAPEYNKAWGQTAGPGSQQTSNPDYNAWVDFYRQPV
AYFNQGTQQTQAPGLQDH
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcggagctggttcagggacaggcctcggtggctcagcccggaacgaaa
gatgacttcgcagacacgatacgccgggtccgacagatggcagccaagatgggaggagac
cagatgcccaacatgaacagttcccctccggtcatagacccctccctctatggcttcgga
ggtcaaaaacgttcactagacaatggagtagggaaccacctcggagcaatggtacatcaa
agggctcttgctacggaagactacaaagtgcctgataagatggtgggattcatcattgga
aaaggaggagaacagatctcaagaattcaactggaatcaggttgtaagatccagattgct
tcagacagtggaggcatgttggacagaccctgcacactgactggaagcccagagaacatt
gatcaggccaagaggctgttgagtgagattgtggagcagtgtcggtatgggccaggcttt
cacagcgacatggacggcagttcgatccaacagatcctcatccccgctaacaaagttggc
cttgtcatcggcaaaggaggagagaccatcaaacaactgcaggagagaacaggagtgcag
atgataatgattcaggatgaccccatgcccactggagcagacaagcccctgagaatcact
ggggatccccacaaagtgcagcaagctcgtgaacttgtggtaaagctcatccgagacaag
gaccaaggagacttcagggttggcagggcagactttggatccaaaatggggggaagcagt
ctggatgtggttgtgcccaggtttgctgtcggcatcatcattggcaggaacggagaaatg
atcaagaagattcagaacgatgcgggggtcaggatccagttcaaacaagatgatggagtc
agtcctgaccgaattgctcaggtgatgggccagccagaccactgccaccatgcggtccac
ctcatcaatgaactggttcaaactgctcaggagcgagatggatttggaggtgtaattgga
cgtcgggggcgaagtgactgtaacatgggaagctctggaggactgcaggaggtgacatat
gcagtacctgctgataagtgtggactagtgattggcaaaggtggagaaaccatcaagaac
atcaaagagcagtctcgtgcccacgtggagctacagaggaacccgccgcccaacaccgac
cccaacgtgcgcatcttctccatccgaggcacccctcagcagttggaaaaggcccgccag
ctgatcgatgagagaattgggggcccaggaatgggggggaacagcagcttcggtatgaat
ccctacaaccaaggaccaaccactcctcctcaacatggggctcagacgttcatgactgga
ggttggggaacaacttttcaaatatggcagcctcaaggccaacaggagcacagtcacaat
ggatcccagacgagccagatggactgggagcagtattataaaaagctaggtcagcaaaac
caagcccagagcactgctcctgaatacaacaaagcttggggccagacagctggccctgga
tctcagcagacctctaatcctgactacaacgcctgggttgacttctacagacagccggtg
gcctacttcaaccagggcacacagcaaacacaagccccgggccttcaggatcattaa
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