Anoplopoma fimbria (sablefish): 129102119
Help
Entry
129102119 CDS
T09102
Symbol
setd1ba
Name
(RefSeq) LOW QUALITY PROTEIN: histone-lysine N-methyltransferase SETD1B-A
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb00310
Lysine degradation
afb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
129102119 (setd1ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129102119 (setd1ba)
Enzymes [BR:
afb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
129102119 (setd1ba)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
129102119 (setd1ba)
HMT complexes
COMPASS/SET1 complex
129102119 (setd1ba)
COMPASS/SET1 complex (yeast)
129102119 (setd1ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N-SET
SET
RRM_1
Motif
Other DBs
NCBI-GeneID:
129102119
NCBI-ProteinID:
XP_054468080
LinkDB
All DBs
Position
14:complement(16193846..16208322)
Genome browser
AA seq
1828 aa
AA seq
DB search
MSKPGEKNRLNEDHGRKQSSSLANGMDSHPVCGSAEKRSHHWRSYKLIIDPALKKGSHKL
YRYDGLTFNMPNPGISPVDMVRDPRIGRLWTKYKETDLPVPTFKIDECYIGPVPPKEVTF
ARLNDNIREGFLNDMCKKFGEIEQVEILYNPKNKKHLGIAKVVFENVKAAKVAVQSLHKT
SVMGNFIHVELDPKGENRLRYFQLLMNGSYTPQTLPVGGEEAREVSPRSLAEALLACEPI
RRLSEGSASSVAGTLPPSSSTTPLSLETGYSSLRQDTPQSQGTPHTPRQTGTPFSQDSNF
SSRQSTPAYQSSRAESSGSYKSRRHESKFQDAYNRRPERPQYRSNMYRSTTSEQAPFKQH
QLTPPEPPPTTPSFTYTAPPPATPNFKSAFSPYQAPLPPAFPPSEPAYPHPAQREGEYLR
PPQPPLAAATDFLPVKERPETPPIPEPPPEPTPHPTTPPPQTPEHCPSPGSPTLDPERNS
LDSRIEMLLKEKRTKLLPFLEERDSDTEVRMEGSPISSSSSQLSPIPPYTSGSQGGRQNS
RPSSTGLEDISPTPLPDSEDEEPIPGTASLIKRISSPVQEKISNNDLKDGHFRGQTPTDK
MEMEMGHQSSGEDMEISDDEMPGTPTSGGECGKGIVINSAVSPMQTISIPPPGFAPLQHQ
ASFQISHHHMAAHSAVPGHPHLAGHPGVPHHMLAPMGPYPHSMMPLVQMELMSCLGWEQW
STVPMSFQMQQQMLSRMAQTRGPYAYPHFIDSAASGPYGAPYQPLTMGVTPAASAAAPGQ
QWQNPSIPKFNPTVPPPGYETKKEDPHKATVDGVLLVIVKELKAIMKRDLNRKMVEVVAF
RAFDDWWEKKEHSAKVSLTPVKGAEGKEEEKPKPKETMGSSLLENWNKGEGLGYEGMGLG
ISLRGAIRLPSFKVKRKDPPEAATAGDNKRARPSTPVDDELEDEDRDRDPAELPLDDSKM
DADSASAKRRHSRPLELDSEGEEEVDTSGKEEESLSDREEEPDKTHATDRLSSGKESGDE
EGDDEDSSSESASSDSSDEEGESSASSKASSDSSAESADSSEYELSSEEEEDEEEEEEEE
EAAVAAQGVEAEGKGAETSSSSSSSSISSSDEEEGKAETKAPGPEAKEDQKSSKELSIKP
KRRPPSPEAEVTEDVKPPSPKGISVKERDISVDANIPAVKEHVANLRPPTPTGAHPDSDQ
ETKAKGKAEPEEVPCXPGRLAPPPVNANTPVPKSASASLMHLPLPPHPAVEGRSLLHPPP
GPLPDLPQRPRLPTDEDIPRTPGRDLMERARSLGKSQSTDTVPITPGSDGGGLLLSSPHI
PGSPFSYPAQSPVLSAGVPRTPGRDLTFTPVFPDPTALTLNRKISTESLDERPVFKEPPI
SALPHQAPSAGAEHSASVPEDLPTGLTVDVPVPSDTAHSKRKPGRPKGKKPPSVCAADES
LELSSESTLLPHDGHLGDLSAQTISAKSPHHPSLDFREGEVKQETVLPDEDGFLSFEEEA
PVTVKPPRRARRGWEELLLGGLSPVTSPPRPYFKSRSEFEEMTILYDIWNEGIDDEDIRL
LQITYDKMLQQDNGNDWLNDTLWVNHPPTNIPRVKKKRRDDGMRDHMTGCARSEGYYKID
KKDKIKYLQSTKLQSEEPPVDTQGMSIPAQVHASTRAGSERRSEQRRLLSSFACDSDLLK
FNQLKFRKKRIRFCKSHIHDWGLFAMEPIAADEMVIEYVGQNIRQVIADMREKRYEEEGI
GSSYMFRVDHDTIIDATKCGNFARFINHSCNPNCYAKVITVESQKKIVIYSRQPINVNEE
ITYDYKFPIEDEKIPCLCGAENCRGTLN
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccaggggagaaaaacagattgaacgaggaccatggcagaaagcagagttca
agtctggcgaacggcatggacagtcatcccgtctgcggctcggcggagaagcggagtcac
cactggagaagttacaagttgattatcgacccggcgctgaagaagggatcccacaaactc
taccgctacgatgggctgactttcaacatgcccaaccccgggatatccccggtggacatg
gtccgagacccgaggatcggtcggctctggactaagtacaaagagacggacctaccggtg
ccgacatttaagatcgatgagtgttacatcggccccgtgcctccaaaggaggtgacattc
gcccggcttaacgacaacatcagggaaggatttcttaacgacatgtgcaagaaattcgga
gaaatcgagcaggttgagatcttgtacaatccgaagaacaaaaagcatctggggattgcc
aaagttgtttttgagaacgtgaaagccgccaaagtggccgtgcagtcgcttcacaagaca
tctgttatgggaaacttcatccacgtggagctggacccgaaaggtgagaatcgcctcagg
tacttccagctcctgatgaatggcagctacactccgcagaccctgcctgttggtggagag
gaggcaagggaagtttcccctcgtagcctggcagaagccctactggcctgcgagcccatc
cgcaggttgtcggagggcagtgcgtcttctgttgcaggaacattgcctcccagcagctcc
accacccctctgtccctggagacgggctactccagcctaaggcaggacacgccccagtcc
cagggaacccctcataccccgcggcagacaggaacgcccttctctcaagactccaacttc
tccagccggcagtccacgccggcgtaccagtccagccgggccgagagctccggaagttac
aaatctcgcagacacgagagcaaattccaggatgcgtacaaccgcagaccagagaggcct
cagtaccgcagcaacatgtacagaagcacgacgtccgagcaggctcccttcaaacagcac
cagctcaccccgcctgaacctccaccaaccaccccctccttcacctacacagcgcctccc
cctgctacgcccaacttcaagtccgccttctcgccctaccaggctcctttgcccccggcg
ttccccccgtcagagcccgcttaccctcacccggcacaaagggagggtgaatacctccgg
ccccctcagccgcctctggccgctgccactgactttttgcccgtcaaggagagaccagaa
actcctccgatcccagagcctccgccggagcctacgccccatccgaccacccctcctcct
caaacgccagagcactgtccctcacccggctcccccacgctcgatccagaacgcaatagt
ctggattcccgcattgagatgctcctcaaagagaaacggacaaaactgctgccgttcctt
gaggagcgagactcggacactgaggtgcgtatggagggaagtccgatttcctcctcgtcc
tctcagctatccccaattcccccgtacacgagtggctcccaaggtggccggcaaaactcc
cgtccctctagtacaggcttggaggacatcagtccgaccccactgccagactcggaagat
gaagaacctattccgggaactgcctccctgatcaagagaatcagttctcctgtccaggag
aagatcagcaacaatgacctcaaagatggacattttcgaggccaaactcctactgataaa
atggaaatggaaatgggtcatcagtcgtcaggcgaggacatggaaatctccgacgacgag
atgcccgggactccaaccagcggtggagaatgtggcaagggcatcgtcataaactctgcg
gtgtcgccgatgcagaccatctccatccctcctcccggcttcgctcccctccagcaccag
gccagcttccagatctcccatcaccacatggccgctcactctgccgtcccgggacaccct
cacctggccggtcaccctggagtgcctcatcatatgctggcacccatgggcccctatcct
cacagcatgatgccactggtgcaaatggagctgatgagctgcttggggtgggaacagtgg
agcaccgtccccatgtccttccagatgcagcagcagatgctgagtcgcatggctcagacc
agaggtccctatgcttatccacactttatagacagcgctgcgtcggggccgtatggggcg
ccctaccagcctctgactatgggagttacacctgctgccagcgcagcagcacccggacaa
caatggcagaatcccagtataccaaagttcaaccctactgttcctccccctggatatgag
actaaaaaggaggatccccacaaggccactgttgacggtgtactgctggtcattgtcaag
gagctgaaggccatcatgaagagggacctcaaccgcaaaatggtggaggtggtggctttc
agagcctttgatgactggtgggagaagaaggaacactcagcaaaggtttctttgactcca
gtgaagggtgccgaggggaaggaagaagaaaaacccaaacccaaagagacgatgggttca
agtctgctggagaactggaacaagggcgaggggctgggctacgaggggatgggcctggga
atcagtctacgaggggccatccgcctgccctccttcaaggtgaaaaggaaagacccgcct
gaggctgcaacagcaggggacaacaaacgagcccgaccctccactccagtggatgacgag
ctggaggatgaagaccgggatcgagacccggcagagctcccgttggacgattcaaaaatg
gacgccgacagtgcatcagcgaagcgacggcactcgcggccgcttgaactggacagcgag
ggggaggaggaggtggacacttcaggaaaggaagaggagtcgttgtcggacagggaggag
gagcctgataaaacacatgccacagatagactgtcatcaggcaaagagagtggcgatgag
gagggtgatgatgaagactcatccagtgagagcgcctcctcagattcgtccgatgaagaa
ggggagagctcagcttcctccaaagccagctcagactcctcggcggaaagcgccgactcc
tctgagtacgagttaagctcggaagaggaagaggatgaggaagaagaagaagaggaggag
gaggcggcggtggcagcccaaggtgtggaggctgaaggcaaaggggcagagacctcctcg
tcctcttcatcttcatcaatttcctcttctgatgaagaggaagggaaggcagagaccaag
gcaccgggcccagaggctaaggaggaccagaagagcagcaaggagctaagcattaaaccc
aaacgcagacctcctagtcctgaggcggaggtgacggaggacgtgaagcctccttcaccc
aaaggcatctcagtcaaagagcgagacatcagtgtagacgctaacattcctgcagtgaag
gagcacgtagcaaacctccggccgcccactcccacaggcgcccaccccgacagcgaccag
gagacaaaagccaaaggtaaagcagagcccgaggaagtcccctgcnaccccggtcgcttg
gccccaccccccgtaaatgcgaacacacctgtccccaaatctgcctccgcatcgttaatg
cacctccctctccctccccacccggcagtagaaggtcgatccctcctccatccgccccct
ggtcccctgcccgacctccctcagcggcccaggctccccacggacgaggacatcccccgc
acgccgggcagggacctgatggagcgtgcccgaagtctgggcaagtcccagagcacggac
actgtgcccatcacgccgggtagtgacgggggtggcctgttgctcagctcccctcacatc
cccggcagccccttttcctaccctgcacaatcccctgtccttagtgctggagtcccccgc
actccaggcagagacttaaccttcacccctgtcttccccgaccccacagcactgactctt
aataggaaaatatccactgagagcctggatgagagacccgtttttaaggagccacccatc
agcgctctgcctcaccaggccccgtcagctggagcagagcattcagccagtgtccctgaa
gatctgcccactggtctcactgtagacgtccctgtgccatcagatactgcccactcgaag
aggaaacctggacgacccaaaggcaaaaagcctccgtctgtctgtgcggctgatgagtct
ttggagctctcatctgagtccacccttctgcctcacgacggacatctcggcgatctatcc
gcgcaaacaatctccgccaagtccccccaccacccgagcctggacttcagggaaggagag
gtgaagcaagagacggtgctacccgacgaggacggcttcctgtccttcgaagaagaggcg
cctgtgaccgtgaagcctccacggagggcgcggcgaggctgggaggagctgctgctgggc
ggcctgtcacccgtcacctcgcctccccggccgtactttaagtcacgctctgagttcgag
gagatgaccatcctgtacgacatctggaacgaaggcatagatgacgaagacatacggctt
ctgcagatcacttatgacaagatgctccagcaggataacggcaacgactggctcaacgac
acgctctgggtcaaccatcctcctaccaacatcccgagagtgaagaaaaagagaagagac
gacggcatgagagatcacatgactggctgcgcgcgaagcgaaggatactacaagatcgac
aagaaggacaagatcaagtaccttcagagcacaaagctgcagtcggaggagccgccggtc
gacacgcagggtatgagtattcctgcacaggtccacgcctctaccagagccggctcggag
cggcgatcggagcagcgacgtttgttgtcctcgttcgcgtgcgacagtgacctgctgaag
ttcaaccagctgaagttccgtaagaaaaggatcagattctgcaagtcgcacatccacgac
tggggtctgtttgctatggagcccatcgccgctgatgaaatggtgatagagtacgtggga
caaaacatcagacaggtgatcgccgacatgcgggagaagcgctacgaggaggagggcatc
ggtagcagctacatgttccgcgtggaccacgacaccatcatagacgctacgaagtgtggc
aacttcgcccgtttcatcaaccacagctgcaatcccaactgttatgcgaaggtcatcaca
gtggagtctcagaagaagattgtgatttactccagacagcccattaacgtcaacgaggag
atcacctacgactacaagttccccatcgaggatgagaagatcccctgtttgtgtggggcg
gagaactgtaggggaacgctgaattaa
DBGET
integrated database retrieval system
