Anoplopoma fimbria (sablefish): 129102147
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Entry
129102147 CDS
T09102
Name
(RefSeq) nipped-B-like protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
129102147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129102147
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
129102147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
Cnd1
HEAT
Cnd3
Motif
Other DBs
NCBI-GeneID:
129102147
NCBI-ProteinID:
XP_054468120
LinkDB
All DBs
Position
14:15419229..15439640
Genome browser
AA seq
2674 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTAKSLLYNGRISEEVSSLLVCRDEN
LVTQLAHSLNQVSTEHIELKDNLGNDEPEGDMPMLLQTLLSRNPKIFRDKSVMQQPIMQQ
YKVSQNQVHGSPGSNYQQTTVPQSPSGCFTSPQSGSGARFAPQQNSPIPSPYTPQSPADY
MQYNPPSYSQHQQTQQVRNIHDNKVSGQLSSTSSNHNARLGSDEDYINMAHRLGNEENDP
SMRAAMFPVKSPGSVCSPAGSEETAKTGSRPPLIMQSPPPDIPPVAEPDQHLTSADRKKK
QKERSKEENELSDMDPSEDLPPRQRVDSEHESDLTNNYHNQLSRTAPDLSHKFGAEEQTN
RKQFPVRPNSKESGVVSRVVFDDAEMDTLAEIERIERESASEKERWSKEVQDKDKPLKKR
KQDTYPQESGAESSDGPTVQGGNSDSKLRTKKTNAASNGGSRPALMVSIDLQQAGRMIGQ
PVVVLEAQTFCEEQLQHLKTKTDGKLEKVAENRPGIIRQHADNPKKSCSDGQPEAPKQKP
ESRRESKHRHDSKTVGGKKHPDDRRPDTPRQKHDKHSDLCNKEEKNHNISRSHVSNPETP
KTISKGERNSKHGEGKAKNRDRDKDRDKDKVGDRDRENNREKDRDKDKDRDREKVGDRDD
RNKEREKDKDRDRDKDRDKDRVRDKDRDRDNDRDRDKNREKDRDKDKDIDKDGDKHRDRD
KDRDRKHKMLRENCNKHSPDRPTKPDSPRVKQDESRKSTDLNGRQKTESSSLQNAQSKKD
RKSGDGSCQAGNKPQTLETKPCEFPSYLLGGKSGTLKNFVIPKLKRDGNDLQLPNKLIES
WSEPLVKLERLSLIKNINKGAKPVVVLNKLNIDEVKKIIKDSRNAHSPRSRSLDKSGREN
KRKHSMISKKSKYAELDEDEGEDKNEDEDDHDHDDEDYSDNESPKKKSKKDHNKSCKQEE
RRGSGQHRSGGSNAARRGSSSRHRSPNGSEEDSPSPSLRDVAKKLKKKEKQKNKKVYDSK
MTPEEKMGSSTFKRFTTNMNNILESLEDVDLTAADDDEIPEELLLGKHHLSELGSDSAKI
KAMCIFSKCSTKKLVKLLNILEKNIQDSVKLSTLMNHENDSVDEERLWRDLIMERVAKSA
DACLTALNIMTSPHMPKAVYIEDVIERVLQYTKYHLQNSLYPQYDPVYRKGGMHTSKSKR
AKISTHKQKVVVMLYDKVCDIVSSISELLEIQLLTDTTILQVSTLGITPFFVENVSELQL
CAITLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSDSEDEPVYIQMVTAL
VLQLIQCVVRLPSERDAEVEHNKKVDKEVFITNSYETAMRTAQNFLSVFLKKCGSKQGED
DYRPLFENFVHDLLSAVNRPEWPAAELLLSLLGRLLVHQFSNKQTEMALRVASLDYLGTV
ASSLRKDAVNSNMDQKAIDRILKETQGSDEIQKLQTALLGYLNENVETDPSLVFARKFYI
AQWFRDTITEVEKAVKSQNDDEDFRGRHDSMDVDSTEEIVQRAETRKKFLRKVMKTSPSD
LSSSSINSDTVAYEDSCLIVRYLASMRPFSQSFDIYLSQILRVLGESAIAVRTKAMKCLS
EVVAVDPSILARLDMQRGVHCRLMDNSTSVREAAVELLGRFVLSRPELIEQYYDMLIERI
LDTGISVRKRVIKILRDICLELPDFHRITEMCVKMIRRVNDEEGIKKLVNETFQKIWFTP
TPSHDKNAMTRKILNITDVVSACKDSGYDWFEQLLQNLLKSEEQASYKPAKKACVQLVDN
LVEHILKYEESIADCEDKGVNSGRLVACSTTLYLFSKIRAQLMVKHAMTMQPYLTTKCNT
QNDFMVICNVAKILELVIPLMEQPSETFLTTLEEDLMKLIIKYGMTVVQHSVSCLGAVVN
KVTHNYKFVWACFNRYYGALAKLKTQHQEDPNSSTLAANKPTLLRSLFTVGALCRHFDFD
QEEFKGANKIIIKDKVLELLLYFTTHEDEEVQIKAITGLGFQFIMHPELMFVQDVKVLYN
NTLSDEKSLVTLKIQVLKNLQTYLQDEDSRMQEADREWKQQSKQEDLKEMGDISSGMSSS
IMQIYLKQVLESFFHSQSTVRHFALSVITLTLSQGLVHPVQCVPYLIAMGTDPEPTMKNK
ADQQLVDIDKKYSGFIHMKAVAGLKMSYQVQQAINGSKGAVIRGFRHDDSDTSLCSHLYT
LVRGNRQYRRAFLISMLNLFDDSSKTEVNMLLFVADNLACFPYQTQDEPLFIMHHVDITL
SVSGSNLLQSFKESLQKGPVQKEKKTTTKKMKTKKKKKKKKKKKPQRRKHGSDDDDNDED
EEDDDDDEEEDDEQSSSTSSSSDEDEEVVHMQKKPAHSDSDADMDDEDAVMDRLPENPNP
LLDFASASQGILLLLVLKQHLKNLYGFSDSKIQKYSPTEAAKIYDKAVNRKSKVHFNPRQ
TLDYLKRNLASTDLSDETKRNIVKQYLDFKVLMEHLDRDEEDQEGEASANARNKAITSLL
KVPKSSSNQNHSKTEPAPAPVETDEEESEEENPPVPQQKQKKAKESAEDTGNMNERVKAM
DIIAICCPKYKDRPQIARVIQRIKTGYSIHWMTGSYSSPWAEVKKREGRKKVPWVDTITE
SDIIYKKISLTSGQKLTNKVVQTLRVLYAAKDGD
NT seq
8025 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtgatatgcctcatgttcccatcactactcttgctggaattgctagcctgaca
gacttgttgaaccagctgcccttgccttctcctctccctgccaccactgctaagagtctg
ctctacaatggaaggatctctgaagaggtcagcagcctgctggtgtgtcgggacgaaaat
ctggtgactcaactggcacatagccttaaccaagtctccactgaacacatagagttgaag
gacaacttggggaacgatgaaccagagggtgacatgccaatgcttctacaaacgttgctg
tccaggaaccccaaaatcttcagggacaaaagtgtaatgcagcagccaattatgcaacag
tataaggtgtctcagaatcaggtgcatgggagtccaggatcaaactatcagcaaaccact
gtccctcaaagcccctctggatgctttacatccccacagtctggatcaggtgctcggttc
gcgccccagcagaacagccctatacccagtccctatacccctcagagtcctgcagactac
atgcagtacaatccacccagttactctcaacaccaacagacacagcaagttagaaatatc
catgacaacaaggtctctggtcagctatcaagtacttcatctaatcataatgcgagacta
ggctcagatgaagactatatcaacatggctcacagactgggaaatgaggagaatgacccc
tccatgagggctgccatgtttccagttaaatcaccagggtctgtgtgttcccctgctggg
agtgaagagactgcaaaaacagggtccaggcctccccttatcatgcagtcccctccacct
gatatcccaccagttgcagaacctgaccagcaccttacctctgctgaccgcaaaaaaaag
cagaaagaaaggagtaaagaagaaaatgagctttcagacatggatccatccgaagatctt
cctccgaggcaacgcgttgattcagaacatgaaagtgatttgacgaataattatcacaac
cagctgtcaaggactgccccggacctgtcacacaagttcggcgctgaggagcagacaaac
cgtaagcagtttcctgttcggcccaatagcaaggagtctggagtcgtgagtagggttgtg
tttgatgatgcagagatggacacactggcagaaatcgagagaatagaacgggagtcggcc
agtgagaaagaacgatggtctaaagaagtccaggataaagataagccactgaagaaacgg
aagcaagacacgtatcctcaggaatccggagctgagtcaagtgacgggccgactgtacaa
gggggcaactcggatagcaagttgagaaccaagaagacgaatgctgcaagtaacggtggc
agtcggcctgctttgatggtcagtattgatctgcagcaagctggcagaatgataggacag
cctgtagtggtcttggaagcacagacgttctgtgaggaacagctacagcacctaaagaca
aagactgatggaaagctagagaaagttgctgaaaacagacctgggatcatcagacagcat
gctgacaaccccaagaagtcttgctcagacgggcaaccagaagcccccaaacagaagccg
gaaagtcgacgggaatccaaacacagacatgacagcaaaactgtcggcggcaagaaacat
ccggatgacagacggccagacacaccgcggcagaaacatgacaagcattcagacttgtgc
aacaaagaggaaaagaaccacaacattagcagatcccatgtgagcaaccctgagactcca
aaaacaattagcaagggggagcgcaattccaaacatggagaaggcaaagccaagaacaga
gatagagataaggacagagataaagacaaagttggagatagagatagggaaaataacaga
gaaaaagatagagacaaggataaggacagagatagagagaaagttggagatcgagatgat
aggaataaggaaagagaaaaagataaagatagagatagggataaggacagagataaagat
agagttagggataaggacagagatagagataatgatagagatagggataagaacagagaa
aaagatagagataaggacaaggacatagataaagatggggataaacacagagatagggat
aaggacagagataggaagcacaagatgttaagggaaaactgcaacaaacactctcctgac
aggccaactaaacctgacagcccgagagtgaaacaagacgaaagtagaaagtctactgac
cttaatggtcgacagaagacagagagttccagccttcaaaacgcacaaagtaagaaagac
aggaaaagtggggacggcagctgccaagctggaaacaaaccgcagacgcttgagacaaaa
ccttgcgagttcccctcatacctgctgggtggcaagtcaggaactctgaagaactttgtg
attcctaaattaaaacgggatgggaatgatcttcaacttccaaacaaattgattgagagc
tggagtgaacccctggtcaagctcgagagattgtcattgataaagaacataaacaaaggg
gcaaagcctgtcgttgtgctcaacaagctcaatattgacgaagtaaaaaagatcattaag
gatagcaggaacgcacacagccccagatccagatccctcgacaaatcagggagagagaac
aagcgaaaacacagtatgatcagtaagaaatccaagtacgctgagttggacgaagatgaa
ggagaagataaaaatgaagatgaagatgaccatgaccatgacgatgaggattactctgac
aatgagtctccaaagaaaaagtccaagaaagatcacaacaagtcatgtaagcaggaagag
aggaggggttctggacagcaccgaagcggaggttcgaatgctgctcgccgggggtccagt
agccgtcaccggagtccaaatggttcagaggaagactctccatcaccaagcttgcgtgat
gttgccaaaaaattgaagaaaaaggagaaacaaaaaaacaagaaggtgtatgattccaag
atgacaccagaagaaaagatgggctcctccacgtttaagagattcacaacaaacatgaac
aacattcttgagagcctcgaggatgtggacctcaccgccgcagatgatgatgagataccc
gaagagctcttacttggaaagcaccacttgagcgagctaggcagtgattctgctaagatc
aaagctatgtgcatcttcagcaagtgttcgactaagaaactggttaaactgttgaatatc
ctcgagaagaacattcaggacagcgtcaaactctccacgctaatgaatcatgaaaatgat
tccgtggatgaggagcggttgtggcgtgaccttatcatggagcgggttgctaagtctgct
gatgcctgtttgactgcactcaacatcatgacatctccacacatgcccaaagcagtctat
atagaagatgtgattgagagggtgctgcagtacaccaagtaccatctgcaaaactctctg
taccctcagtatgacccagtctacagaaaaggtggcatgcatacttcaaaatccaagaga
gcaaagatttccacccataaacagaaggtagtagtcatgctctacgacaaagtgtgtgat
attgttagcagtatctcagagctcctggagatccagctgctcactgacaccactattctc
caggtgtccacgctgggcattacaccttttttcgtggagaatgtcagtgaactgcagtta
tgtgccatcacacttgtgacagcagtgttctctcgttacgagaagcacaggcagctcatt
cttgaagagatcttcacctctctagctagacttccaactagtaaacgcagcctcaggaac
tttaggctaaacagtgattcagaggacgagcccgtgtatatccagatggtcacagcactg
gtgcttcagctcatccagtgtgtggttcgccttccctcagagagggacgcagaagttgaa
cataataagaaggtggataaagaagtcttcatcacaaactcttatgaaactgccatgagg
acagctcagaacttcctatcggtgtttctcaagaagtgtggcagtaagcagggagaggat
gactacaggcctctgtttgagaactttgttcatgacctgctgtctgcagtcaacaggcct
gagtggcctgcagctgaactgctgctcagtttactcggccggctgttggtgcaccagttc
agtaacaagcagacagaaatggcgctcagggtggcatcgctggactacctcggcactgtc
gcttccagcctgcgcaaagacgctgtcaatagcaacatggaccaaaaggctattgaccgc
atcctcaaagagactcaaggcagtgatgagatccagaaactccagacggccttgctgggc
tacctaaatgagaacgttgagacggatccatctctagtcttcgccaggaagttttacatc
gctcagtggttcagggacactataactgaggtagagaaagcggtgaagtctcaaaatgac
gatgaggacttcagaggtcgacatgattccatggacgttgactcaactgaggagatcgtg
cagagggcagagacacgaaagaaattccttcgcaaggtcatgaagacatcaccatcagat
ttgagttcttcaagcataaactctgacacagtagcctatgaggactcatgcctgattgtc
agatatctggcctccatgaggccgttttcacagagctttgatatttatttatcacagatt
ctgagagtgctgggtgagagtgccatcgcagtcagaactaaagccatgaagtgtctgtct
gaagtggtagctgtggatccaagtattctggcacggttggatatgcagcgtggggttcac
tgtcgcctcatggacaactccaccagtgtgcgagaggcagccgtggagctacttggccgt
tttgtgctaagtcgaccggagctcattgagcagtactatgacatgctcattgaaaggata
ttggacacgggtataagtgttaggaagagggtcattaagatcttgagggatatttgcctg
gagctgccggacttccataggatcaccgagatgtgtgtcaagatgatccgaagggtcaac
gatgaagaggggatcaagaaactggtgaatgagacattccagaaaatctggttcactccc
acacccagtcatgacaaaaatgccatgacccggaagattctgaacatcacagatgtggtg
tcagcatgtaaagattcaggctatgactggtttgagcagcttctccaaaatctactgaag
tcagaagagcaagcctcctacaaacctgccaagaaggcctgtgttcagttagtggacaat
ctggtggaacacatactgaaatacgaggagtcgattgcagactgtgaggacaaaggggtc
aactcaggtcgtctggtagcatgcagcaccactctctacctgttcagcaagatcagagca
cagttaatggtcaaacatgccatgactatgcagccctacttgaccaccaagtgcaacact
cagaatgacttcatggtcatatgtaacgtggcaaagatcttggagctggtgattcctctg
atggagcaaccaagtgaaactttcctcaccaccctagaagaagacctgatgaagctcatt
atcaaatacggcatgacggttgttcagcactctgtaagctgccttggcgctgttgtcaac
aaggtcacacacaactacaagtttgtctgggcttgtttcaatcgctactatggagctctg
gcaaaactgaagacacagcaccaggaggaccccaacagctccactctggctgctaacaaa
cctactctcctgcgctcactgttcactgtgggggctctctgtcggcacttcgattttgac
caagaggagttcaagggtgctaacaagatcatcatcaaggataaagtgctggagcttctg
ttgtacttcaccactcatgaagatgaagaggtccagatcaaggccatcacgggtctaggc
ttccagttcatcatgcatccagagctcatgtttgtgcaggatgtgaaggttctgtacaac
aataccctgtcagatgaaaagagtttggtcactctgaagatccaggtgctaaaaaacctg
cagacatacctgcaagatgaggactctcgaatgcaggaagccgatcgcgaatggaagcag
caatccaagcaggaggatctgaaagaaatgggggacatctcctcgggcatgagcagctca
ataatgcagatttacctgaagcaggttctggagtccttcttccactcacagtccactgtt
cgtcactttgccctgagtgtcatcacactgactctcagccagggcctcgtccaccctgtt
cagtgtgtgccctacctgattgcaatgggaacagaccctgagccaaccatgaagaacaag
gccgatcaacagttggtggatatcgacaagaaatattcaggcttcatccatatgaaggcc
gtagcagggttgaagatgtcttatcaggtgcaacaggccataaatggatccaaaggtgca
gtgattcgaggttttcgtcacgatgactcagacacctctctctgctctcatctctacact
ctggtccgagggaatcgacaatatagacgagctttcctcatttccatgctcaacttgttc
gatgacagctccaaaacagaggtgaacatgctgttgttcgtagcagacaacttggcctgc
ttcccctaccagacccaggacgagcctcttttcatcatgcaccatgtagatattactctg
tcggtctctggtagcaacctgctccagtctttcaaggagtctctacagaaagggcctgta
cagaaggaaaagaagacgacgacaaagaagatgaagacaaaaaagaagaagaagaaaaag
aagaagaagaagcctcagagaagaaaacatggctccgatgatgacgacaatgacgaagat
gaagaagatgatgatgatgatgaagaagaggacgatgagcagagcagtagcacatccagc
agcagtgatgaggatgaggaggtggttcatatgcaaaagaaacctgcgcactctgattct
gacgctgacatggatgatgaggatgcagtgatggaccgtctgcctgaaaaccccaacccg
ctgctggactttgccagtgcttcacagggcattctgctgctgctggtgctaaaacaacat
ctgaagaatctgtacggcttctcagacagcaaaatccagaagtattccccgacggaggct
gccaaaatttacgacaaggcagtgaacaggaaatccaaggtgcacttcaaccctcgtcag
acactggattacctaaagaggaaccttgccagcacagatctcagcgacgagaccaagagg
aatattgtgaaacaatatttggatttcaaggtactgatggagcacttggatcgtgacgag
gaggaccaagagggggaagcaagtgccaatgccagaaacaaagccattacttcactgctg
aaggtcccaaaatcttcttcgaaccagaaccacagtaaaaccgaacctgctccagctcca
gtggagacggatgaggaggagagtgaggaagaaaatccgcctgtgccacagcagaaacag
aagaaagccaaggagtctgcagaggatacaggtaacatgaatgagagagtgaaggccatg
gacatcattgccatctgctgtcccaaatacaaagacagaccacagattgccagggtcatc
cagaggatcaaaactggctacagtatacactggatgactggatcttactcttcgccctgg
gctgaggtaaagaaacgggaaggtcgcaaaaaggttccttgggttgacactatcacggag
tcagacatcatttacaagaaaatatctttgacaagtggacaaaagctgacgaacaaagtg
gtacagacgttacgagtgctatacgctgccaaggacggggactaa
DBGET
integrated database retrieval system