Anoplopoma fimbria (sablefish): 129102253
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Entry
129102253 CDS
T09102
Symbol
bbs4
Name
(RefSeq) Bardet-Biedl syndrome 4 protein
KO
K16531
Bardet-Biedl syndrome 4 protein
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129102253 (bbs4)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
afb03037
]
129102253 (bbs4)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
129102253 (bbs4)
Cilium and associated proteins [BR:
afb03037
]
Primary cilia and associated proteins
BBSome
129102253 (bbs4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_11
TPR_19
TPR_14
ANAPC3
TPR_16
TPR_12
TPR_17
TPR_CcmH_CycH
TPR_9
TPR_6
TPR_15
ARM_TT21_4th
TPR_7
ARM_TT21_2nd
TPR_Slam
ARM_TT21_C
ARM_TT21_N
PknG_TPR
NatA_aux_su
ARM_TT21_5th
Wzy_C_2
TPR_20
HAT_PRP39_C
HrpB1_HrpK
SAPI
GGACT
Motif
Other DBs
NCBI-GeneID:
129102253
NCBI-ProteinID:
XP_054468288
LinkDB
All DBs
Position
2:complement(7460718..7475163)
Genome browser
AA seq
541 aa
AA seq
DB search
MATASCVAHPKMADEEISTALPVATEAKKRRAPKAPELPIVERRNWLIHQHYIRKDYDSC
KAIIKEQLQETNGMCEYAIYVQALIMRLEGKIQQSLELFQSCAILNPSSADNLKQVARSL
FLLGKHKATIEFYHEAARLNEKDWEISHNLGLCYFFIKDFKHAEEHLNIALRINKHDKTF
MMLGKVHLQAGETDKAIEVYKTAVEYSPENTELLSTLGLLFLQLGKYQKAFEHLGNALTF
DPNNYKAILAAGSMMQTHGDFDVAMNKYRVAACAVPESPPLWNNIGMCFFGKKKYVAAIS
CLKRAHYMSPFDWKVLYNLGLVHLTMQQYASAFHFLSAAINLHPRMGELYMLLAVALTNL
DDVENATRAYEQAVTIDQSNPLVNLNFAIFLYNHGDKKATLDQYQEMERKVNILRDSNSN
FDFDPELMDMAQKMGAALQVTEGLVWTKPGKDSKSKPNSAAATKAPGAPLGTNQALGQAM
SSAASYNKNLQLQTGPSMPLEPEPDVEKAPSQPTDPPGSPEPAESENPKPRTSKRKSKVE
E
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagcttcttgtgtcgctcatcccaagatggcggacgaggagatctccacggcg
ctcccagttgccactgaagccaagaaacgtcgggcacctaaagctccagagcttcccatt
gtggagaggagaaactggctcatccaccagcactatatccggaaggactatgattcctgc
aaggcaatcatcaaggaacaactgcaggagactaatggaatgtgtgaatatgccatatat
gttcaagcactaatcatgcgtcttgagggcaagatccaacagtccctggagctgtttcag
agctgtgccatcctgaatcccagcagcgctgacaatctcaagcaagtggccagatcacta
tttctcctgggaaagcacaaagcaactattgagttctatcatgaagctgcaaggctcaac
gagaaagactgggagatcagtcataatctggggttgtgctatttcttcatcaaagacttc
aaacatgctgaagagcatctaaacatagccctccggattaataaacacgacaagacgttc
atgatgctcgggaaggttcatctgcaggctggagaaactgacaaggccatcgaagtgtat
aagacggccgtggaatattctccagagaatactgagctcttgagtactcttggcctgctg
tttctacagcttgggaaataccaaaaagcttttgagcaccttggaaatgccctcactttt
gaccccaacaattataaggccatcctggctgcaggcagcatgatgcagactcacggtgac
tttgatgtggccatgaacaagtaccgagtggcagcctgcgccgttcccgagagcccccct
ctttggaacaacatcggcatgtgcttctttggaaaaaagaaatacgtagccgccatcagc
tgcctgaagcgagcccactacatgtctccttttgactggaaggtgttgtacaacctgggt
ctggttcacctgaccatgcagcagtacgcctctgccttccacttcctcagcgcagccatc
aacctgcacccacggatgggggagctctacatgttactggcagtggctctgaccaaccta
gatgatgtagagaatgccaccagagcgtatgaacaagctgtgacaattgaccagtccaac
cctctggtcaacctgaactttgccatcttcctctataatcatggtgataagaaggcaact
ctggatcagtatcaggagatggagaggaaggtcaacatacttcgagacagcaatagcaac
tttgactttgatcctgagctaatggacatggctcagaagatgggagctgccctacaggtg
acagagggtctggtgtggactaaaccgggcaaagactccaaatccaaaccaaactctgca
gcagccaccaaagcccctggtgctcccctcggtactaaccaagctctgggccaagccatg
tcttctgcagcgagctacaacaagaacctccagctacaaacaggcccctccatgcccctc
gagcctgaaccggatgtggagaaagcccccagccagcccactgatcctccgggctcccca
gaacctgcagagtcagaaaaccccaaacccagaacctccaagaggaaatctaaggtggag
gaatga
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