Anoplopoma fimbria (sablefish): 129102256
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Entry
129102256 CDS
T09102
Symbol
ddx55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afb03009
]
129102256 (ddx55)
Enzymes [BR:
afb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129102256 (ddx55)
Ribosome biogenesis [BR:
afb03009
]
Eukaryotic type
Pre-60S particles
Helicases
129102256 (ddx55)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
SBF_like
YbjM
Motif
Other DBs
NCBI-GeneID:
129102256
NCBI-ProteinID:
XP_054468289
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All DBs
Position
14:2404000..2411118
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AA seq
598 aa
AA seq
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MESSTEGTWDSLPVKLTDGILQTLEDVKFTHMTPVQSACIPLFMSNKDVAAEAVTGSGKT
LAFVIPIIELLLRREEKLKKMQVGALVITPTRELALQISEVMELFLQKFPQFTQILLIGG
TNPIDDVERFKDKGANIVIATPGRLEDMFRRKADGLDLASSVRSLDVLVLDEADRLLDMG
FEMSLNTILGHLPKQRRTGLFSATQTQELEKLVRAGLRNPVRIAVKEKGVAATAAIQKTP
SRLCNYYTICRAENKFNNLVAFLRQRKLEKHLVFFSTCACVEYFGRALETLIKRVTVHCI
HGKMKNKRNKIFADFRALKSGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCGRT
ARIGNQGNALVFLLPMEESYVTFLSINQKCPLQKMVLTGEVLDILPRVKAMSLADRAMFD
RGMRAFVSFVQAYAKHECSLIFRIKDLNFATLARGFALLRMPKMPELKGKTVPGFTRMAL
DTDTIRYKDKNREKQRQKMLAELKEKEKTPFVKKNFIKNKAWSKQKTKKERKKKRSAKRK
HEEGSDVEDEDMKELLNDHRILKRLKKGQISEEDFEKQITSGTMSKHNVAAVSVDEEA
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggagagctccacagaggggacgtgggacagtctgccggtgaagctcaccgacgggatc
ctacagacgctggaagacgtgaagttcacgcacatgacacctgtacagtctgcttgcatc
cctctgttcatgagtaacaaagatgtggctgctgaggcggtgaccgggagcggaaagacg
ctcgcttttgtgattcccatcatagagctgctcctgaggagagaagaaaagctgaagaag
atgcaggttggagctctggtgatcactcccaccagagaactggcccttcagatcagtgaa
gtgatggagctgttccttcagaagtttccacagtttacgcagattttgctgattggtggc
accaacccgatagacgacgtggagaggtttaaggataaaggggcgaacatcgtgattgcg
acaccgggtcgtctggaggacatgttcaggaggaaggcagacggtctggacctggccagc
tcagtcaggagtctggatgttctggttctggacgaggccgacagactgctggacatgggg
ttcgagatgagtctgaacaccatcttgggccacctgcctaaacagaggcggacgggcttg
ttttcagccacccagactcaggagctggagaagttggtgagggccggactcaggaacccg
gtacgcatcgccgtgaaggagaagggcgtggctgcaaccgccgccatccagaaaacaccg
tccaggctctgcaactactacaccatatgcagagcggagaacaagttcaacaacctggtg
gcgtttctaaggcaacgcaagctggagaagcatctggtcttcttcagtacgtgtgcgtgc
gtggagtacttcggtcgagctctggagactctgatcaagagggtcaccgtccactgcatc
cacggcaagatgaagaacaaacgcaacaagatctttgccgacttccgggctctgaaaagt
gggatcttggtgtgcacagacgtcatggcccgagggatcgatatccccgaagtcaactgg
gtgctgcagtacgatcctcccagcagcgccagtgcttttgtgcatcgatgtggacgtaca
gctcgtatcggtaaccagggcaacgccctcgtcttcctgctgccgatggaggagtcgtat
gtcacctttctgtccatcaaccagaagtgtccgctccagaagatggtcctcacaggtgaa
gttttggacattctgcccagagtgaaggccatgtctctggcagacagagccatgtttgat
cgaggcatgagggccttcgtgtcgttcgtccaggcgtacgccaaacacgaatgcagcctc
atcttcaggatcaaagatctgaactttgccacgctggcccgcggcttcgccctcctccgc
atgcccaagatgcccgagctgaaggggaaaaccgtccccggcttcaccaggatggcgctg
gacacggacaccatccgctacaaggacaagaaccgggagaagcagagacagaagatgctc
gccgagctgaaggaaaaagaaaagacgccgtttgttaaaaagaacttcatcaagaacaag
gcctggtcgaaacagaagaccaagaaggaacgcaagaagaagaggtcggccaagaggaag
cacgaggagggctccgacgtggaagacgaagacatgaaggagcttttaaatgaccatcgc
atcctcaagaggctcaagaaaggtcagatcagcgaggaggactttgagaagcagatcaca
agcggaacaatgtccaaacacaacgtagcagcagtatccgtggacgaggaggcgtga
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