Anoplopoma fimbria (sablefish): 129102261
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Entry
129102261 CDS
T09102
Symbol
oclna
Name
(RefSeq) LOW QUALITY PROTEIN: occludin
KO
K06088
occludin
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03272
Virion - Hepatitis viruses
afb04514
Cell adhesion molecules
afb04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
129102261 (oclna)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129102261 (oclna)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
129102261 (oclna)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
afb01009
]
129102261 (oclna)
Protein phosphatases and associated proteins [BR:
afb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129102261 (oclna)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
Swi5
SUR7
CCDC22_CC
Cation_ATPase_C
WLS-like_TM
Sec8_N
UPF0184
NnrU
Phage_Mu_Gp48
Motif
Other DBs
NCBI-GeneID:
129102261
NCBI-ProteinID:
XP_054468297
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All DBs
Position
14:complement(2067337..2077299)
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AA seq
502 aa
AA seq
DB search
MSSRPNGSPPPYESDTGYNVPPQPAYSYYPDDEFQHFYRWTSPPGVLKIMSIISIVMCVA
IFACVASTLAWDSQGAMGGFGVSVGSYGGSYGGGGYGGGGYGGGGYGGGSYGGGGGYGYG
QLGGNYNDPRKGKGFIIAMAAITFIACLTIFIIVVSHQSLSESRRFYLAVVIICAILALL
MLIAAIVYLVAVNPSAQSGSAYGSQIAGLCAQYQQPQVTGVFVNQYLYHYCVVEPQEAIA
VVFGFLVAVALIIMLVFALKTRQKIRSFGKSNILWKKVKVINEMEPPQDVEAWVNNVSVG
PEVLPMSDYPDKRRGSRNQLDDESTNYDKPPYIYTPQPPEEEVIPLQNGAPYSTNSDVPS
SAGRPKKRRANRPRRADGQDYETDYNSSGDELDDNDFDGEFPRIADEAERNDYKRQFDHD
HAEYKDLQAELDALNKSLSEVDRELDDLQEGSPQYLDALDEYNRIKKIKKSPDYQVKKRR
CKYLKSKLNHIKKMVIDYDRNA
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccaggcccaatgggagtcctcctccctacgagtcagataccggatataacgtc
cccccccagccggcctactcctactaccccgacgacgagttccagcacttctaccgctgg
acgtctcctccgggggtcctcaagatcatgtccatcatctccatcgtgatgtgcgtcgcc
atctttgcctgcgtcgcctccacgctggcctgggactctcagggagcgatgggcggattc
ggggtgtcggtgggcagctatgggggaagttacggaggaggtggctacggaggaggtggc
tacggaggaggtggctacggcggcggcagctacggaggaggcggcggttacggttacggc
cagctcggagggaactacaatgacccccgaaagggcaaagggttcatcatcgccatggca
gccatcacgttcatcgcctgcctgaccatcttcatcatcgtcgtgtcccatcagagcctg
tcggagagccggaggttctacctagccgtcgtgatcatctgcgccattctagcattgcta
atgcttatagccgccatagtgtacttggtggcggtgaatccgtcagcgcagtccggatcg
gcctacggaagccagatcgccggtctgtgcgctcaataccaacaaccgcaggtcacaggg
gtcttcgtcaaccagtacctttaccactactgcgtcgtggagccacaagaggccatcgcg
gtggtcttcggcttcctggtcgccgtcgctctcatcatcatgctcgtcttcgctctgaag
acgcgccagaaaatcagaagcttcggcaagagcaacatcttgtggaagaaggtgaaggtc
atcaacgagatggagccgccgcaagacgtggaggcatgggtgaacaatgtgtccgttgga
cctgaagtgctcccgatgtcggactaccccgacaagcggaggggctccaggaatcaactg
gacgacgaaagcaccaactacgacaaacccccgtacatctacacgccacagcctccagag
gaagaagtcattcctttgcagaacggcgccccctacagcacaaactcagatgtgcccagc
tcggccgggaggccaaagaagagacgagcaaatcggccgcgacgcgccgacggacaagac
tacgaaacggactacaactcctccggagacgagctggacgacaacgactttgacggtgaa
tttcctcggatagcagatgaggcggagcgcaacgactacaagcgtcagtttgaccacgac
cacgcggagtacaaagacctgcaggcggagctggacgccctcaacaagagtctgtcggag
gtggaccgagagctggacgacctgcaggagggcagcccacagtacctggatgctctggat
gagtacaacaggataaagaaaatcaagaagtctccagactaccaggtgaagaagcgcagg
tgtaaatatctgaagtccaaactgaaccacatcaagaagatggtcatcgattacgaccgc
aatgcctga
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