Anoplopoma fimbria (sablefish): 129102280
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Entry
129102280 CDS
T09102
Symbol
cacna1bb
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04010
MAPK signaling pathway
afb04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129102280 (cacna1bb)
04020 Calcium signaling pathway
129102280 (cacna1bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129102280 (cacna1bb)
Ion channels [BR:
afb04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
129102280 (cacna1bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
129102280
NCBI-ProteinID:
XP_054468322
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All DBs
Position
14:21670017..21821647
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AA seq
2420 aa
AA seq
DB search
MVRKHETLNSTPWPRGMARFSEDLPTRYGGGAGSGGGRGGPGAGRGGARGGGAPGGQRVY
KQSMAQRARTMAIYNPNPVKQNCLTVNRSLFIFREDNLIRKYAKRITEWPPFEYMILATI
IANCIVLALEQHLPASDKTPMSERLDDTEPYFIGIFCFEAAIKIIALGFAFHKGSYLRNG
WNVMDFVVVLTGILATVGSDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQ
IGLLLFFAIVMFAIIGVEFYMGKFHTTCFKIETGERAADWPCGLEPPARLCPNGTQCREY
WTGPNFGITNFDNILFAVLTVFQCITMEGWVDILYSTNDVAGNTWNWLYFIPLIIIGSFF
MLNLVLGVLSGEFAKERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVLLEEEDEI
AEEKSPLDGAWYKRKQNLPVLKRGKVKKGKNDLIGAEEGEDPFADISSIPPPGSPFGRAS
MKSSCKMDNSSYFRRKEKRTRFFIRRMVKAQSFYWIVLCLVGLNTLCVAIVHYDQPEWLT
TALYTAEFVFLGLFLTEMSLKMYGLGARNYFHSSFNCFDFGVIVGSIFEVIWDMIKPGAS
FGISVLRALRLLRIFKVTKYWNSLRNLVVSLLSSMKSIISLLFLLFLFIVVFALLGMQLF
GGQFNFEDETPTTNFDTFAAAILTVFQILTGEDWNAVMYHGIESQGGVRRGMFSSVYFIV
LTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEQEEAANKKLALQKAMEVKEVSPISAAN
ISISAFVKQNRDEFSRRSSINSIQSPKEQQRSAKAMSVWEQRTNQLRRHNIRSSNEALFN
ELDPDECLQRGSTLHLHPDMKTHLDRPLVVEAKNGDKPSRSPEGSWEEFGDPRKDGMGDN
FHTHSRKHHRHRERNGESRDGGESRGGRHHTHHSRSRDHNTEGDQMRERRGESSHSRDGG
QGHRHHHQAGSPEEEASDSRGGEERGHRHHHSHRPPKEGNGLMANGAQGERRGRGGGGGD
SNGERKGRCSRMVRAQSTLDGDDFKRNKNGTKGHRERHPDSEEDGFASSPLQPMRSSLSL
GEKQEDADNQKNSTRASQAGLNSNTIHIPVTITGPPGETTIIPMNNIDCDNFGLSEEKKD
LEEEEAANGPRQILPYSSMFIFGQTNPVRRLCHYVVNLRYFEMCILMVITMSSIALAAED
PVQANAPRNNVLKYLDYVFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGAL
VAFACSSLMGSQQSVTRGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLK
NVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKGLEKDCRGQFLDYDRDDVAAQPRE
WKKYEFHYDNVLWAFLTLFTVSTGEGWPLVLKHSVDATYEDEGPSPGFRMETSIFYVVYF
VVFPFFFVNIFVALIIITFQEQGDKAMSECSLEKNERACIDFAINAKPLTRYMPENKQSF
QYRMWKFVVSPPFEYAIMTLIALNTVVLMMKFYGAPDLYESMLKYLNIIFTALFTLECIL
KIIAFGPLNYLKAAWNVFDFVTVLGSITDILVTEIKTDKMINLSFLRLFRAARLIKLLRQ
GYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIELNEETAINHHNNFQTF
FQALTLLFRSATGEAWHEIMLACLSNRPCDRLSGTVGKDCGSDFGYFYFVSFIFLCSFLM
LNLFVAVIMDNFEYLTRDASILGPHHLDEFIRVWAEYDPAACGRICYQDMYKLLRFISPP
LGLGKKCPNRVAYKRLVRMNMPIAEDRTVHFTSTLMALIRTALEIKLASGVLAQHLCDAD
LKREINRVWPSLSQKTVDLLVTPPKYNELTVGKVYAALMIFDYYKQTCAKRLQQQHTGGH
QSKLGALFRPMLPLTHIQEVEPPICSPKQPLPPQPEPEPKPETLPSTAIISVNMDRILNQ
RSGIKHSQSGDVSQAAQQRPKVRRKLQRGQSEDVPYSTRPQEYVELKQVENISDTEGYPS
LEGHCRAASLPRLNAEYYRSHPRHAPGTHLAPIVDLSPIRRSASSLTPQHHQEDGLREYD
LERPGLAQSSMGPGQVEGQDRAHHHHHHHRCHRRRDKDKDKKQKSLDRAGSVQPSSTVDS
FTDPSAEGLSRERARERDRSRPHERRHHSSAGEKQRYYSCERYGSREQCHTKSAGPSRST
SPGDGQDAVFLKQYGSSAVKAGLVTLPSGSSTPGRGRRQLPQTPLTPRPAVTYKTTNSSP
LQSGASTAATGHQTRFSRGLSEHERLHWGHDESPIPVTRIGSDPNLNRQSQFASQHTLHE
EDFQDTVSSHGGGRSARTTASTTASTSNGTATASATAASAQGRAGGVPNGYHFTLGVNSA
SGPGSRGTGSLRERDEEDWC
NT seq
7263 nt
NT seq
+upstream
nt +downstream
nt
atggtcaggaagcacgaaaccctgaacagcacgccatggccccgcggaatggctcgattc
tcagaagatctgcccacccgctatggaggaggtgcaggcagtggcggagggagaggagga
ccgggcgccggcagagggggtgcccggggaggtggcgctccgggtggccagagggtgtac
aagcagtcgatggcccagagagcccggacaatggccatctacaacccgaaccctgtcaaa
caaaactgcctcacggtcaaccgctccctcttcatcttccgggaggacaacctcatcagg
aagtatgcaaagcgaataacagagtggcctccatttgagtacatgatcctcgctacaatt
atcgccaactgcatcgtcttggccctggagcagcatctgcctgccagcgacaagacaccc
atgtcagaacgcctggacgacacagagccctactttattggaatattctgtttcgaggct
gccattaagatcatcgccctgggctttgcatttcacaaaggctcctacctccgcaacggc
tggaatgtaatggacttcgtggtcgtcctcacgggaatcctggccacggtgggttcggac
tttgacctgcgaacactgcgagccgtgagagtgctgagacccctgaaacttgtgtcagga
atcccaagtctccaggtggtattgaagtccattatgaaagccatggttcctctgctccag
atcggcctgctgcttttcttcgccatcgtcatgtttgccatcatcggggtggagttctac
atgggcaaattccacaccacctgcttcaagatagagactggtgagagagcagcagactgg
ccttgtggtctggagcctcctgccaggttgtgtcccaacgggacccagtgcagagagtac
tggactggacccaactttggcatcaccaactttgacaacatcctgtttgccgtgcttact
gtgttccagtgcatcaccatggagggttgggtggacatcctctacagcaccaatgatgta
gcaggaaacacctggaactggctctacttcatccctctcatcatcatcggttccttcttc
atgctcaacctggtgctcggtgtcctctccggagaatttgccaaagaaagagagcgtgtg
gagaagaggcaagagttcctgaagctccggaggcagcagcagatcgagagagagctcacc
gggtatttggagtggatctgcaaagcagaggaggtgttgctggaagaggaggatgagatt
gcagaggagaagtccccgctggatggtgcgtggtacaaaaggaaacaaaaccttccagtc
ctgaaaagaggcaaagtcaagaaaggtaaaaacgacctgatcggcgctgaggagggagag
gatccttttgcagacatatcctctatccctcctcctggctctccttttggccgggccagc
atgaagagcagctgtaagatggataactcctcttacttcaggcgtaaggagaagaggacc
cgcttcttcatccgccgcatggtgaaagctcagagcttctactggatcgttctgtgtctg
gtgggcctcaacactctgtgtgtggccatagtccactacgaccagcccgaatggctcaca
acggccctctacacagccgagtttgtgttcctgggtttgtttctgactgagatgtccttg
aagatgtacggcctcggagcgaggaattatttccactcctcctttaactgctttgatttt
ggggtgattgtgggaagtatttttgaggtgatctgggacatgattaaaccaggggcctcg
tttggaatcagtgtgctgagagctctgcgactgctcaggatattcaaagtcaccaaatat
tggaactcgttgaggaacctcgtggtgtccctccttagttccatgaaatccatcatcagc
ttgctcttcctcctcttcctcttcatcgtggtctttgctctgctgggcatgcagctcttc
ggaggacagttcaactttgaagatgagacgccaacaacaaactttgatacattcgcagca
gccatcctcactgttttccagattctgactggcgaggactggaacgccgtgatgtaccac
ggaatcgagtcccaaggtggcgttcgtcgaggcatgttctcctccgtctacttcatcgta
ctcacgctctttggaaactacaccctcctgaatgtcttcttggctatcgctgtcgataac
ctcgctaatgcacaggagctgactaaggatgaagaggagcaggaggaggcagccaataag
aagcttgccctgcagaaagctatggaggtgaaagaagtcagcccgatatctgcagccaac
atctcaatttctgcttttgtaaagcaaaatcgagatgaattctctcgcaggtcgtccatc
aacagcattcagtcacctaaggagcagcagcgctcagcaaaggccatgtcagtgtgggag
cagaggaccaaccagctacggagacacaacataaggtcgagcaacgaggctttgttcaac
gagctcgacccggacgagtgcctccagaggggctccaccctccatctgcacccggacatg
aagactcacctggaccggccgctggtggtggaggccaagaacggggacaaacccagcagg
tctcccgaaggatcgtgggaggaatttggggatccccggaaggacgggatgggagacaac
ttccacacacactccaggaagcaccaccggcaccgcgaaaggaacggggagagccgggac
ggaggcgaaagccggggagggaggcaccacacccatcacagccggagcagagatcacaac
actgaaggtgaccagatgagagagaggagaggggagagcagccacagccgagacggaggg
cagggacacaggcaccaccaccaggccggctcccctgaggaggaggccagtgactctcga
ggaggagaagagagggggcaccgccaccatcactcccatcgtccaccaaaagaaggaaac
gggctgatggcaaatggtgcacaaggagagcgcagggggaggggcggaggaggaggggac
agtaatggagagaggaagggacgctgctctcgtatggtcagagctcagtccactctggat
ggagacgactttaagaggaacaagaatggaaccaaaggtcacagggagaggcatcctgat
tctgaggaagacggctttgcctccagtcctctgcagccaatgaggagtagcctgagtctt
ggcgaaaagcaagaggatgctgacaaccagaagaactccaccagggccagccaggccggc
ctcaacagcaacaccatccacatccctgtcactatcaccggcccaccaggagaaaccacc
atcatacccatgaacaatattgactgcgacaactttggactcagtgaggagaagaaagac
ctggaggaggaggaggcagctaatgggcctcggcagatccttccctacagctccatgttc
atcttcgggcaaacaaatcctgtgcggcggctgtgtcactacgtggtcaacctacgctac
tttgaaatgtgcatcctgatggtcataaccatgagcagcatcgccctggcagccgaggac
ccagtgcaagccaacgcaccgcgcaacaacgttctcaagtatctggactatgtctttact
ggggtcttcacttttgagatggtgattaagatgattgacttgggactgctcctccatcct
ggcgcttatttccgtgacctctggaacattctggacttcattgtggtcagcggagctctg
gttgcctttgcctgctcgagcctcatgggatcgcaacaaagcgtgaccagagggacgaaa
ggcaaggacatcaacaccatcaagtccctgagggtcctccgagtcctgcggccactcaag
accattaaacggcttcccaagctgaaggcggtgttcgactgtgttgtgaactctctgaag
aacgttctcaacatcctcattgtctacatgctcttcatgttcatcttcgctgttatcgct
gtgcagctctttaagggcaaattcttctactgcactgacgagtccaagggtctggagaaa
gactgcaggggtcagtttctggactacgacagggatgacgtggccgctcagcccagagag
tggaagaagtacgagttccactacgacaatgttctctgggctttcctcacgctattcacg
gtgtcaacgggggagggctggccactggtcctgaagcactcagtggacgccacgtatgag
gacgagggccccagcccaggcttccgcatggagacatccatcttttatgtggtctacttc
gtggtgttccccttcttctttgtcaacatatttgtggctttgatcatcatcaccttccag
gagcagggagacaaggccatgtcggagtgtagcctggagaagaatgagagggcttgtatt
gactttgccatcaacgccaagccactgacgagatacatgccggagaataagcagtccttc
cagtacaggatgtggaagtttgtggtgtcgcccccgtttgagtacgccatcatgacttta
atagctctcaacacagtcgtgctgatgatgaagttctacggagctccagacctttacgag
tccatgctgaagtacttgaacatcatcttcacagccctcttcacactggagtgcatcctt
aagattattgccttcggtccgctgaattacctgaaagcagcctggaatgtgtttgacttt
gtgactgtgcttggaagcatcacagacatcttggtcacagagattaagacggacaagatg
atcaacctgagtttcctgaggctgttcagagcagctcgtctcatcaagctactgcggcag
ggctacaccatccgcatcctgctgtggacctttgttcagtccttcaaggccctgccgtat
gtctgcctgctcattgccatgctgttcttcatctatgccatcattggaatgcaggtgttt
ggaaacatcgagctgaatgaggagacggcaataaaccaccacaacaacttccagactttt
ttccaagccttgactcttctcttcaggagtgcgacaggcgaggcgtggcatgagatcatg
ttagcttgtctcagtaaccggccgtgtgataggctctcaggaaccgtggggaaggactgt
gggagtgactttggttacttctacttcgtctccttcatcttcctctgctccttcctgatg
ttgaacctgtttgtcgctgtcattatggacaactttgagtatctgacgagagacgcctcc
atccttgggcctcatcaccttgacgaattcatccgcgtgtgggcagagtacgaccctgca
gcctgtgggaggatatgctatcaggatatgtacaaattgttgcgttttatctcgcctccc
ctgggcctggggaagaagtgccctaacagggtggcttataagcgattggtgaggatgaac
atgcccatagctgaagacaggacggtgcatttcacctccacactgatggccttgattcgc
acagccctggagatcaaactggcatctggcgtcttggcgcaacatttgtgcgacgctgac
ctgaagagggagataaaccgagtctggcccagcctgtcgcagaagactgtggacctgctg
gtgacgccacctaaatacaatgagctgactgtgggaaaagtctatgcagctctaatgatc
tttgactactataagcaaacttgtgccaagagactccagcagcagcatacagggggacac
cagagtaaactgggggcgttgttccgtcctatgctgcccctcactcacatacaggaagta
gagcccccgatctgcagccccaaacagcctctcccacctcagcctgagccagaacccaag
ccagaaacactgccgtctactgccattatctcggttaacatggacaggatactaaaccag
aggagtggcatcaaacattcccagtcaggagatgtctctcaggcagcacaacagaggccc
aaagtacggaggaaactacagagaggccagtcagaggatgtgccatattccaccagacct
caggaatacgttgaactgaagcaggtggagaacatatcagacacagagggatatccgagc
ctagaaggccactgcagagcggcttctctgccacgactcaacgctgagtactaccggagc
caccctcgccacgcccctgggacccacctggcaccgatcgttgacctcagtcctatcagg
cgctcggcatcctcgctgacgccgcagcaccaccaggaggacggtctaagggagtatgac
ctggaacggcctggtttggcccagtcctcaatggggccaggccaagtcgagggccaggac
agagcccaccaccatcaccaccaccaccgctgccacagacggagggacaaggacaaagat
aagaagcagaagtccctggatagagctggatcagtgcagccgtccagcactgttgactcg
ttcaccgacccttcagctgagggtttgtccagagaacgggcgagggagcgggatcgcagc
cggcctcatgagaggaggcaccactcctcagcaggagagaagcagcgctactactcctgc
gagcgttacggcagcagggagcagtgtcacaccaagtcagccgggcccagtcgatccacg
tctccgggagacggacaggacgctgttttcctcaaacagtatggtagcagtgcggtcaaa
gctggccttgtaacgctcccctctggttcaagcactccgggccgcggtcgcaggcagctc
ccacagacgcccctaacccctcgtcctgcagtgacctacaagaccaccaactcctcgcct
ctccagtccggtgccagcaccgccgcgacgggacaccagactcgcttcagccgtggcctt
tcagagcacgaacgcttacactggggccacgacgagtccccaataccggtcacccgcatc
ggttcggaccctaatttaaaccgtcagtcgcagttcgcctcgcaacacaccctccatgaa
gaggacttccaggacactgtgagcagccacggagggggacgctccgccagaaccactgcc
tccaccacagcttcaacttcaaatggaaccgccactgcatctgccacagcggccagcgcg
caggggagggcagggggggttcccaacgggtaccacttcaccctgggggtcaactctgca
tccgggcctgggagccgaggaaccggaagcctcagggagagggacgaagaggactggtgc
taa
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integrated database retrieval system
